Homologs of GFF2378 from Variovorax sp. SCN45

UPF0701 protein YicC
SEED: Protein YicC

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF2378 UPF0701 protein YicC no data 100 100
o Variovorax sp. OAS795 ABID97_RS23655 YicC/YloC family endoribonuclease cofit 94 100
o Acidovorax sp. GW101-3H11 Ac3H11_3667 Protein YicC no data 68 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3251 Protein YicC no data 66 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04007 TIGR00255 family protein sig. 43 99
o Paraburkholderia graminis OAS925 ABIE53_003233 uncharacterized protein (TIGR00255 family) strong 43 99
o Burkholderia phytofirmans PsJN BPHYT_RS15320 hypothetical protein insig. 42 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS03650 YicC/YloC family endoribonuclease sig. 42 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS15240 YicC/YloC family endoribonuclease sig. 43 99
o Dechlorosoma suillum PS Dsui_0497 TIGR00255 family protein strong 43 99
o Ralstonia solanacearum GMI1000 RS_RS10815 YicC family protein no data 44 99
o Ralstonia solanacearum PSI07 RPSI07_RS13855 YicC family protein sig. 44 99
o Herbaspirillum seropedicae SmR1 HSERO_RS10650 hypothetical protein sig. 41 98
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS03330 YicC family protein insig. 43 99
o Ralstonia solanacearum UW163 UW163_RS10390 YicC family protein insig. 43 99
o Cupriavidus basilensis FW507-4G11 RR42_RS04905 hypothetical protein no data 42 99
o Methylophilus sp. DMC18 GFF2133 hypothetical protein insig. 39 100
o Shewanella amazonensis SB2B Sama_0319 hypothetical protein (RefSeq) strong 39 99
o Kangiella aquimarina DSM 16071 B158DRAFT_0582 TIGR00255 family protein cofit 38 99
o Castellaniella sp019104865 MT123 ABCV34_RS03510 DUF1732 domain-containing protein insig. 39 99
o Shewanella oneidensis MR-1 SO4257 conserved hypothetical protein TIGR00255 (NCBI ptt file) sig. 38 99
o Alteromonas macleodii MIT1002 MIT1002_04072 hypothetical protein cofit 37 99
o Marinobacter adhaerens HP15 HP15_301 conserved hypothetical protein insig. 39 90
o Shewanella sp. ANA-3 Shewana3_3778 hypothetical protein (RefSeq) strong 38 99
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS16790 YicC family protein insig. 36 99
o Shewanella loihica PV-4 Shew_3489 hypothetical protein (RefSeq) sig. 37 99
o Pseudomonas sp. RS175 PFR28_04421 hypothetical protein no data 39 99
o Pseudomonas fluorescens FW300-N2C3 AO356_12495 hypothetical protein sig. 39 99
o Pseudomonas syringae pv. syringae B728a Psyr_0212 Conserved hypothetical protein 255 insig. 38 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0212 Conserved hypothetical protein 255 insig. 38 99
o Rhodanobacter denitrificans MT42 LRK55_RS11475 YicC family protein sig. 37 99
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS11750 YicC family protein sig. 37 99
o Enterobacter sp. TBS_079 MPMX20_00091 hypothetical protein strong 37 99
o Pseudomonas aeruginosa MRSN321 DY961_RS12565 YicC/YloC family endoribonuclease strong 40 99
o Pseudomonas aeruginosa PA14 IKLFDK_26780 YicC-like family N-terminal region strong 40 99
o Pseudomonas stutzeri RCH2 Psest_3814 TIGR00255 family protein no data 39 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_783 Protein YicC insig. 38 99
o Serratia liquefaciens MT49 IAI46_24855 YicC family protein cofit 37 99
o Pseudomonas aeruginosa PUPa3 DQ20_RS49560 YicC/YloC family endoribonuclease sig. 40 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4364 Protein YicC insig. 38 99
o Erwinia amylovora T8 OLJFJH_05750 YicC-like family N-terminal region strong 37 99
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00031 hypothetical protein cofit 36 99
o Pseudomonas sp. SVBP6 COO64_RS01515 YicC/YloC family endoribonuclease insig. 40 99
o Pseudomonas segetis P6 ACVTMO_RS00155 YicC/YloC family endoribonuclease insig. 40 99
o Pseudomonas sp. S08-1 OH686_13565 UPF0701 protein YicC cofit 39 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1220.1 Protein YicC sig. 36 99
o Enterobacter asburiae PDN3 EX28DRAFT_3894 TIGR00255 family protein cofit 37 99
o Pseudomonas sp. BP01 JOY50_RS09020 YicC/YloC family endoribonuclease insig. 37 99
o Klebsiella michiganensis M5al BWI76_RS27395 hypothetical protein strong 36 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_01110 YicC family protein insig. 35 99
o Pseudomonas fluorescens FW300-N2E3 AO353_09265 hypothetical protein insig. 36 99
o Pseudomonas putida KT2440 PP_5295 conserved protein of unknown function sig. 37 99
o Pseudomonas sp. DMC3 GFF416 hypothetical protein no data 36 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2116 Protein YicC no data 36 99
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_07725 YicC-like family N-terminal region cofit 34 99
o Erwinia tracheiphila SCR3 LU632_RS22050 YicC family protein cofit 34 99
o Pectobacterium carotovorum WPP14 HER17_RS20905 YicC family protein cofit 35 99
o Pseudomonas simiae WCS417 PS417_27815 hypothetical protein insig. 37 99
o Pseudomonas orientalis W4I3 QF045_RS02170 YicC/YloC family endoribonuclease cofit 35 99
o Lysobacter sp. OAE881 ABIE51_RS17280 YicC/YloC family endoribonuclease insig. 35 99
o Pseudomonas fluorescens SBW25 PFLU_RS29495 YicC family protein insig. 36 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS29495 YicC family protein strong 36 99
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS18765 YicC family protein cofit 35 99
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS11895 YicC/YloC family endoribonuclease insig. 35 99
o Pantoea sp. MT58 IAI47_00580 YicC family protein insig. 35 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF365 Protein YicC cofit 35 99
o Rhodanobacter sp. FW510-T8 OKGIIK_12145 yicC YicC-like family, N-terminal region no data 37 99
o Escherichia coli Nissle 1917 ECOLIN_RS20760 YicC/YloC family endoribonuclease sig. 35 99
o Escherichia coli BL21 ECD_03501 UPF0701 family protein strong 35 99
o Escherichia coli ECOR27 NOLOHH_07465 yicC UPF0701 protein YicC insig. 35 99
o Escherichia coli ECOR38 HEPCGN_14405 yicC UPF0701 protein YicC insig. 35 99
o Escherichia coli ECRC100 OKFHMN_15585 yicC UPF0701 protein YicC cofit 35 99
o Escherichia coli ECRC101 MCAODC_06095 yicC UPF0701 protein YicC sig. 35 99
o Escherichia coli ECRC102 NIAGMN_13345 yicC UPF0701 protein YicC cofit 35 99
o Escherichia coli ECRC62 BNILDI_04050 yicC UPF0701 protein YicC cofit 35 99
o Escherichia coli ECRC99 KEDOAH_12560 yicC UPF0701 protein YicC no data 35 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00058 hypothetical protein strong 35 99
o Escherichia coli BW25113 b3644 yicC hypothetical protein (NCBI) strong 35 99
o Dickeya dianthicola 67-19 HGI48_RS00540 YicC family protein strong 34 99
o Dickeya dianthicola ME23 DZA65_RS00575 YicC family protein sig. 34 99
o Escherichia fergusonii Becca EFB2_00169 hypothetical protein insig. 35 99
o Klebsiella pneumoniae MKP103 KDGMDA_08085 YicC-like family N-terminal region strong 35 99
o Dickeya dadantii 3937 DDA3937_RS20645 YicC family protein cofit 34 99
o Escherichia coli ECRC98 JDDGAC_19210 yicC UPF0701 protein YicC sig. 35 99
o Rahnella sp. WP5 EX31_RS14510 YicC family protein cofit 36 99
o Phaeobacter inhibens DSM 17395 PGA1_c15840 TIGR00255 family protein insig. 36 100
o Magnetospirillum magneticum AMB-1 AMB_RS03835 YicC family protein insig. 36 100
o Azospirillum sp. SherDot2 MPMX19_00983 hypothetical protein no data 33 99
o Caulobacter crescentus NA1000 CCNA_01752 YicC-family protein strong 35 100
o Caulobacter crescentus NA1000 Δfur CCNA_01752 YicC-family protein insig. 35 100
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS06780 YicC family protein insig. 36 89
o Rhodospirillum rubrum S1H Rru_A0428 hypothetical protein (NCBI) no data 34 100
o Bosea sp. OAE506 ABIE41_RS17740 YicC/YloC family endoribonuclease insig. 34 100
o Xanthobacter sp. DMC5 GFF3533 hypothetical protein insig. 34 100
o Agrobacterium fabrum C58 Atu1100 hypothetical protein sig. 32 100
o Azospirillum brasilense Sp245 AZOBR_RS16330 hypothetical protein no data 33 98
o Sinorhizobium meliloti 1021 SMc00576 hypothetical protein sig. 31 100
o Rhodopseudomonas palustris CGA009 TX73_015880 YicC family protein insig. 30 100
o Dinoroseobacter shibae DFL-12 Dshi_1528 domain of unknown function DUF1732 (RefSeq) insig. 33 89
o Desulfovibrio vulgaris Hildenborough JW710 DVU0898 conserved hypothetical protein (TIGR) strong 33 89