Homologs of GFF2298 from Xanthobacter sp. DMC5

Ribosome maturation factor RimP
SEED: FIG000325: clustered with transcription termination protein NusA
KEGG: ribosome maturation factor RimP

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF2298 Ribosome maturation factor RimP no data 100 100
  Rhodopseudomonas palustris CGA009 TX73_002280 ribosome maturation factor RimP sig. 66 65
  Bosea sp. OAE506 ABIE41_RS04540 ribosome maturation factor RimP no data 61 65
  Agrobacterium fabrum C58 Atu0090 hypothetical protein no data 57 61
  Rhizobium sp. OAE497 ABIE40_RS00320 ribosome maturation factor RimP no data 59 60
  Sinorhizobium meliloti 1021 SMc02911 hypothetical protein no data 58 60
  Dinoroseobacter shibae DFL-12 Dshi_3560 protein of unknown function DUF150 (RefSeq) no data 45 66
  Phaeobacter inhibens DSM 17395 PGA1_c34650 UPF0090 protein YhbC strong 47 64
  Magnetospirillum magneticum AMB-1 AMB_RS20595 ribosome maturation factor cofit 49 56
  Azospirillum brasilense Sp245 AZOBR_RS01420 ribosome maturation factor RimP no data 51 54
  Azospirillum sp. SherDot2 MPMX19_02519 Ribosome maturation factor RimP no data 51 50
  Sphingobium sp. HT1-2 GFF2359 Bacterial ribosome SSU maturation protein RimP no data 50 54
  Rhodospirillum rubrum S1H Rru_A3778 Protein of unknown function DUF150 (NCBI) no data 47 55
  Caulobacter crescentus NA1000 CCNA_00044 ribosome maturation protein RimP strong 44 59
  Caulobacter crescentus NA1000 Δfur CCNA_00044 ribosome maturation protein RimP cofit 44 59
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2150 Uncharacterized protein conserved in bacteria no data 48 49
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13990 ribosome maturation factor RimP no data 45 52
  Pseudomonas aeruginosa MRSN321 DY961_RS09475 rimP;go_process=ribosomal ribosome maturation factor RimP no data 42 43
  Pseudomonas aeruginosa PA14 IKLFDK_29870 ribosome maturation factor RimP no data 42 43
  Pseudomonas aeruginosa PUPa3 DQ20_RS52560 rimP;go_process=ribosomal ribosome maturation factor RimP no data 42 43
  Pseudomonas sp. S08-1 OH686_17135 Bacterial ribosome SSU maturation protein RimP no data 39 43
  Pseudomonas putida KT2440 PP_4714 ribosome maturation factor no data 41 40
  Pseudomonas sp. BP01 JOY50_RS26825 rimP ribosome maturation factor RimP no data 41 40
  Dechlorosoma suillum PS Dsui_2724 hypothetical protein no data 39 51
  Cupriavidus basilensis FW507-4G11 RR42_RS12855 ribosome maturation protein RimP no data 43 39
  Pseudomonas segetis P6 ACVTMO_RS05945 rimP ribosome maturation factor RimP no data 40 40
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS09060 ribosome maturation factor RimP no data 45 40
  Pseudomonas stutzeri RCH2 Psest_0979 Uncharacterized protein conserved in bacteria no data 38 43
  Marinobacter adhaerens HP15 HP15_3069 protein belonging to uncharacterized protein family UPF0090 no data 36 39
  Pseudomonas sp. SVBP6 COO64_RS15180 rimP ribosome maturation factor RimP no data 39 40
  Rhodanobacter sp. FW510-T8 OKGIIK_05840 rimP ribosome maturation protein RimP insig. 45 39
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS06035 ribosome maturation factor RimP no data 44 38
  Enterobacter asburiae PDN3 EX28DRAFT_3221 Uncharacterized protein conserved in bacteria no data 38 48
  Enterobacter sp. TBS_079 MPMX20_04075 Ribosome maturation factor RimP no data 38 48
  Rhodanobacter denitrificans MT42 LRK55_RS00830 ribosome maturation factor RimP no data 52 29
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS01055 ribosome maturation factor RimP no data 52 29
  Burkholderia phytofirmans PsJN BPHYT_RS08060 ribosome maturation factor RimP strong 42 48
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05102 ribosome maturation factor RimP sig. 49 35
  Dickeya dadantii 3937 DDA3937_RS03060 ribosome maturation factor RimP no data 41 37
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2000.1 FIG000325: clustered with transcription termination protein NusA no data 41 39
  Pseudomonas sp. RS175 PFR28_00088 Ribosome maturation factor RimP no data 38 40
  Paraburkholderia sabiae LMG 24235 QEN71_RS23110 ribosome maturation factor RimP sig. 42 48
  Pseudomonas syringae pv. syringae B728a Psyr_4182 Protein of unknown function DUF150 no data 39 37
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4182 Protein of unknown function DUF150 no data 39 37
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3355 FIG000325: clustered with transcription termination protein NusA no data 38 40
  Shewanella amazonensis SB2B Sama_0959 hypothetical protein (RefSeq) no data 43 31
  Pseudomonas fluorescens FW300-N2C3 AO356_07420 ribosome maturation protein RimP no data 38 40
  Pectobacterium carotovorum WPP14 HER17_RS18220 ribosome maturation factor RimP no data 34 52
  Dickeya dianthicola 67-19 HGI48_RS03230 ribosome maturation factor RimP no data 40 37
  Dickeya dianthicola ME23 DZA65_RS03225 ribosome maturation factor RimP no data 40 37
  Paraburkholderia graminis OAS925 ABIE53_001828 ribosome maturation factor RimP sig. 48 35
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1163 FIG000325: clustered with transcription termination protein NusA no data 37 39
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1496 FIG000325: clustered with transcription termination protein NusA no data 38 47
  Pseudomonas sp. DMC3 GFF4986 Ribosome maturation factor RimP no data 37 39
  Pseudomonas fluorescens GW456-L13 PfGW456L13_5090 FIG000325: clustered with transcription termination protein NusA no data 37 39
  Pseudomonas fluorescens FW300-N2E3 AO353_05570 ribosome maturation protein RimP no data 37 40
  Escherichia coli ECOR27 NOLOHH_09900 rimP ribosome maturation factor RimP no data 37 48
  Escherichia coli ECOR38 HEPCGN_16975 rimP ribosome maturation factor RimP no data 37 48
  Escherichia coli ECRC100 OKFHMN_18100 rimP ribosome maturation factor RimP no data 37 48
  Escherichia coli ECRC101 MCAODC_08620 rimP ribosome maturation factor RimP no data 37 48
  Escherichia coli ECRC102 NIAGMN_15860 rimP ribosome maturation factor RimP no data 37 48
  Escherichia coli ECRC62 BNILDI_01635 rimP ribosome maturation factor RimP no data 37 48
  Escherichia coli ECRC98 JDDGAC_21725 rimP ribosome maturation factor RimP no data 37 48
  Escherichia coli ECRC99 KEDOAH_10050 rimP ribosome maturation factor RimP no data 37 48
  Kangiella aquimarina DSM 16071 B158DRAFT_0112 Uncharacterized protein conserved in bacteria strong 41 36
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_13925 rimP ribosome maturation factor RimP no data 40 37
  Escherichia coli BL21 ECD_03037 ribosome maturation factor for 30S subunits strong 37 48
  Escherichia fergusonii Becca EFB2_00653 Ribosome maturation factor RimP no data 37 48
  Escherichia coli Nissle 1917 ECOLIN_RS18205 ribosome maturation factor RimP no data 37 48
  Escherichia coli Nissle 1917 ECOLIN_RS18225 ribosome maturation factor RimP no data 37 48
  Escherichia coli Nissle 1917 ECOLIN_RS18245 ribosome maturation factor RimP no data 37 48
  Escherichia coli Nissle 1917 ECOLIN_RS18265 ribosome maturation factor RimP no data 37 48
  Escherichia coli BW25113 b3170 rimP conserved protein (RefSeq) no data 37 48
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00530 Ribosome maturation factor RimP no data 37 47
  Vibrio cholerae E7946 ATCC 55056 CSW01_03380 ribosome maturation factor RimP no data 34 47
  Lysobacter sp. OAE881 ABIE51_RS08385 ribosome maturation factor RimP no data 43 38
  Castellaniella sp019104865 MT123 ABCV34_RS02115 ribosome maturation factor RimP no data 42 41
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04947 Ribosome maturation factor RimP no data 36 39
  Erwinia amylovora T8 OLJFJH_07230 ribosome maturation factor RimP no data 36 40
  Pseudomonas orientalis W4I3 QF045_RS26235 ribosome maturation factor RimP no data 36 39
  Pseudomonas simiae WCS417 PS417_23980 ribosome maturation protein RimP no data 36 39
  Erwinia tracheiphila SCR3 LU632_RS21070 rimP ribosome maturation factor RimP no data 39 37
  Alteromonas macleodii MIT1002 MIT1002_01769 Ribosome maturation factor RimP no data 37 37
  Pseudomonas fluorescens SBW25 PFLU_RS25820 ribosome maturation factor RimP no data 36 39
  Pseudomonas fluorescens SBW25-INTG PFLU_RS25820 ribosome maturation factor RimP no data 36 39
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15670 ribosome maturation factor RimP no data 43 36
  Ralstonia solanacearum UW163 UW163_RS13130 ribosome maturation factor RimP no data 43 36
  Klebsiella pneumoniae MKP103 KDGMDA_05910 ribosome maturation factor RimP no data 36 47
  Shewanella loihica PV-4 Shew_2829 hypothetical protein (RefSeq) no data 37 41
  Rahnella sp. WP5 EX31_RS08550 ribosome maturation factor RimP no data 38 37
  Klebsiella michiganensis M5al BWI76_RS25100 ribosome maturation factor no data 36 48
  Serratia liquefaciens MT49 IAI46_01925 ribosome maturation factor RimP no data 34 48
  Pantoea sp. MT58 IAI47_17035 ribosome maturation factor RimP sig. 32 52
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS09130 ribosome maturation factor RimP strong 32 52
  Ralstonia solanacearum PSI07 RPSI07_RS17685 ribosome maturation factor RimP no data 41 36
  Ralstonia sp. UNC404CL21Col ABZR87_RS11200 ribosome maturation factor RimP no data 41 36
  Ralstonia solanacearum GMI1000 RS_RS06450 ribosome maturation factor no data 41 36
  Shewanella sp. ANA-3 Shewana3_1028 hypothetical protein (RefSeq) no data 36 40
  Shewanella oneidensis MR-1 SO1202 conserved hypothetical protein (NCBI ptt file) no data 38 38
  Herbaspirillum seropedicae SmR1 HSERO_RS18005 ribosome maturation protein RimP no data 33 52