Homologs of GFF188 from Sphingobium sp. HT1-2

Conjugative transfer protein TrbB
SEED: Conjugative transfer protein TrbB
KEGG: type IV secretion system protein VirB11

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF188 Conjugative transfer protein TrbB cofit 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0389 P-type conjugative transfer ATPase TrbB insig. 73 97
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3072 P-type conjugative transfer ATPase TrbB insig. 75 96
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2912 P-type conjugative transfer ATPase TrbB insig. 73 97
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2572 P-type conjugative transfer ATPase TrbB insig. 62 98
o Rhodopseudomonas palustris CGA009 TX73_021370 P-type conjugative transfer ATPase TrbB insig. 62 96
o Xanthobacter sp. DMC5 GFF2635 hypothetical protein insig. 62 98
  Rhodopseudomonas palustris CGA009 TX73_011525 P-type conjugative transfer ATPase TrbB insig. 59 97
  Xanthobacter sp. DMC5 GFF3638 hypothetical protein insig. 59 98
o Rhodospirillum rubrum S1H Rru_A0808 type II secretion system protein E (NCBI) insig. 58 97
  Castellaniella sp019104865 MT123 ABCV34_RS00155 P-type conjugative transfer ATPase TrbB insig. 61 93
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4435 Conjugative transfer protein TrbB insig. 59 93
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3453 Conjugative transfer protein TrbB insig. 60 93
o Shewanella sp. ANA-3 Shewana3_1282 type II secretion system protein E (RefSeq) cofit 59 96
  Ralstonia solanacearum GMI1000 RS_RS12955 P-type conjugative transfer ATPase TrbB insig. 60 93
o Variovorax sp. SCN45 GFF4849 Conjugative transfer protein TrbB insig. 57 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4176 Conjugative transfer protein TrbB insig. 58 96
  Variovorax sp. SCN45 GFF6579 Conjugative transfer protein TrbB insig. 58 96
o Pseudomonas aeruginosa PA14 IKLFDK_12825 P-type conjugative transfer ATPase TrbB no data 58 96
  Rhodopseudomonas palustris CGA009 TX73_021310 P-type conjugative transfer ATPase TrbB insig. 61 84
  Variovorax sp. SCN45 GFF4414 Conjugative transfer protein TrbB insig. 58 93
  Dickeya dianthicola 67-19 HGI48_RS03925 P-type conjugative transfer ATPase TrbB insig. 58 93
  Dickeya dianthicola 67-19 HGI48_RS08420 P-type conjugative transfer ATPase TrbB insig. 56 98
o Dickeya dadantii 3937 DDA3937_RS03995 P-type conjugative transfer ATPase TrbB insig. 55 98
o Agrobacterium fabrum C58 Atu6041 conjugal transfer protein insig. 50 93
o Marinobacter adhaerens HP15 HP15_p42g52 type II secretion system protein E cofit 44 97
  Pseudomonas fluorescens FW300-N2E3 AO353_01570 pilus assembly protein CpaF insig. 39 93
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_496 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily insig. 38 93
  Burkholderia phytofirmans PsJN BPHYT_RS22920 pilus assembly protein CpaF insig. 39 93
  Shewanella loihica PV-4 Shew_0644 FHA domain-containing protein (RefSeq) insig. 35 92
  Pseudomonas sp. RS175 PFR28_03044 hypothetical protein insig. 39 93
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5915 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily insig. 38 93
  Pseudomonas fluorescens FW300-N2C3 AO356_19980 pilus assembly protein CpaF insig. 38 93
  Shewanella amazonensis SB2B Sama_0708 type II/IV secretion system protein E (RefSeq) insig. 35 93
  Ralstonia solanacearum GMI1000 RS_RS03280 CpaF family protein insig. 38 93
  Pseudomonas sp. S08-1 OH686_19900 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily insig. 36 97
  Paraburkholderia graminis OAS925 ABIE53_004998 pilus assembly protein CpaF sig. 39 94
  Pseudomonas sp. SVBP6 COO64_RS23430 CpaF family protein insig. 37 93
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2070 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily insig. 38 93
  Cupriavidus basilensis FW507-4G11 RR42_RS04100 pilus assembly protein CpaF insig. 38 94
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06368 pilus assembly protein CpaF no data 39 94
  Ralstonia sp. UNC404CL21Col ABZR87_RS08500 CpaF family protein insig. 38 93
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS12510 CpaF family protein insig. 37 94
  Ralstonia solanacearum UW163 UW163_RS01055 CpaF family protein insig. 37 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS10645 CpaF family protein insig. 37 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS17490 ATPase, T2SS/T4P/T4SS family insig. 37 96
  Agrobacterium fabrum C58 Atu0218 component of type IV pilus insig. 36 95
  Rhizobium sp. OAE497 ABIE40_RS00885 CpaF family protein insig. 37 95
  Castellaniella sp019104865 MT123 ABCV34_RS08110 CpaF family protein insig. 37 93
  Desulfovibrio vulgaris Miyazaki F DvMF_2738 type II secretion system protein E (RefSeq) insig. 37 93
  Rhodopseudomonas palustris CGA009 TX73_019075 CpaF family protein insig. 38 93
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS12005 CpaF family protein insig. 36 95
  Burkholderia phytofirmans PsJN BPHYT_RS34040 hypothetical protein insig. 35 97
  Burkholderia phytofirmans PsJN BPHYT_RS08185 pilus assembly protein CpaF insig. 39 93
  Desulfovibrio vulgaris Hildenborough JW710 DVU2122 cpaF type II/IV secretion system protein (TIGR) insig. 36 93
  Sinorhizobium meliloti 1021 SMc02820 pilus assembly protein insig. 35 95
  Paraburkholderia graminis OAS925 ABIE53_002438 pilus assembly protein CpaF cofit 39 93
  Pseudomonas stutzeri RCH2 Psest_2619 Flp pilus assembly protein, ATPase CpaF insig. 39 92
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS18510 CpaF family protein insig. 39 100
  Ralstonia solanacearum UW163 UW163_RS20620 CpaF family protein insig. 39 100
  Ralstonia solanacearum PSI07 RPSI07_RS05045 CpaF family protein insig. 38 100
  Magnetospirillum magneticum AMB-1 AMB_RS18950 CpaF family protein insig. 37 95
  Cupriavidus basilensis FW507-4G11 RR42_RS35985 pilus assembly protein CpaF sig. 41 93
  Variovorax sp. OAS795 ABID97_RS09105 CpaF family protein insig. 37 94
  Ralstonia solanacearum GMI1000 RS_RS22355 CpaF family protein insig. 38 100
  Variovorax sp. OAS795 ABID97_RS24290 CpaF family protein no data 38 100
  Bosea sp. OAE506 ABIE41_RS03685 CpaF family protein insig. 38 91
  Paraburkholderia sabiae LMG 24235 QEN71_RS43755 ATPase, T2SS/T4P/T4SS family insig. 37 92
  Pseudomonas aeruginosa PA14 IKLFDK_02600 type 4b pilus Flp biogenesis ATPase TadA insig. 38 97
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4121 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily no data 38 93
  Caulobacter crescentus NA1000 CCNA_03037 pilus assembly ATPase CpaF cofit 37 95
  Caulobacter crescentus NA1000 Δfur CCNA_03037 pilus assembly ATPase CpaF cofit 37 95
  Pseudomonas segetis P6 MPMX49_04040 hypothetical protein insig. 37 93
  Pseudomonas sp. S08-1 OH686_02520 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily insig. 38 93
  Variovorax sp. SCN45 GFF2208 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily insig. 37 100
  Pectobacterium carotovorum WPP14 HER17_RS17705 CpaF family protein insig. 34 97
  Castellaniella sp019104865 MT123 ABCV34_RS04365 ATPase, T2SS/T4P/T4SS family insig. 36 100
  Sphingobium sp. HT1-2 GFF4554 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily cofit 34 92
  Ralstonia sp. UNC404CL21Col ABZR87_RS19545 CpaF family protein strong 37 100
  Pseudomonas syringae pv. syringae B728a Psyr_4393 type II secretion system protein E sig. 36 97
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4393 type II secretion system protein E sig. 36 97
  Sinorhizobium meliloti 1021 SMa1568 CpaF2 pilus assembly protein insig. 36 92
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1278 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily insig. 35 100
  Ralstonia solanacearum PSI07 RPSI07_RS20760 CpaF family protein insig. 37 94
  Phaeobacter inhibens DSM 17395 PGA1_c06110 Flp pilus assembly protein, ATPase CpaF insig. 38 93
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0975 Flp pilus assembly protein, ATPase CpaF insig. 33 92
  Pseudomonas fluorescens SBW25 PFLU_RS03175 CpaF family protein insig. 36 86
  Pseudomonas fluorescens SBW25-INTG PFLU_RS03175 CpaF family protein strong 36 86
  Pseudomonas simiae WCS417 PS417_03095 ATPase sig. 36 86
  Pseudomonas fluorescens FW300-N2E3 AO353_13820 ATPase insig. 35 97
  Pseudomonas sp. SVBP6 COO64_RS18465 CpaF family protein insig. 35 93
  Pseudomonas sp. DMC3 GFF3341 hypothetical protein cofit 35 93
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS01870 P-type DNA transfer ATPase VirB11 insig. 34 85
  Dinoroseobacter shibae DFL-12 Dshi_1126 type II secretion system protein E (RefSeq) insig. 36 93
  Dechlorosoma suillum PS Dsui_2579 Flp pilus assembly protein, ATPase CpaF cofit 32 97
  Caulobacter crescentus NA1000 CCNA_02505 type IV secretory pathway, VirB11 ATPase sig. 33 80
  Caulobacter crescentus NA1000 Δfur CCNA_02505 type IV secretory pathway, VirB11 ATPase cofit 33 80
  Marinobacter adhaerens HP15 HP15_p187g9 type II secretion system protein E strong 38 75
  Agrobacterium fabrum C58 Atu5172 type IV secretion protein AvhB11 insig. 32 81
  Sinorhizobium meliloti 1021 SMa1302 VirB11-like ATPase insig. 32 80