Homologs of PS417_05870 from Pseudomonas simiae WCS417

RNA-binding protein S4
SEED: tRNA pseudouridine synthase A (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase F

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_05870 RNA-binding protein S4 insig. 100 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01345 Dual-specificity RNA pseudouridine synthase RluF cofit 98 100
o Pseudomonas fluorescens SBW25 PFLU_RS05940 RNA-binding protein S4 insig. 98 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS05940 RNA-binding protein S4 insig. 98 100
o Pseudomonas orientalis W4I3 QF045_RS08785 rRNA pseudouridine synthase no data 98 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3158 tRNA pseudouridine synthase A (EC 4.2.1.70) insig. 92 100
o Pseudomonas fluorescens FW300-N2C3 AO356_05610 RNA-binding protein insig. 92 100
o Pseudomonas fluorescens FW300-N2E3 AO353_16865 RNA-binding protein insig. 91 100
o Pseudomonas sp. RS175 PFR28_00484 Dual-specificity RNA pseudouridine synthase RluF insig. 89 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4655 tRNA pseudouridine synthase A (EC 4.2.1.70) insig. 89 100
o Pseudomonas protegens RBAN4 FABNJH_06515 S4 domain protein insig. 86 100
o Pseudomonas sp. DMC3 GFF2124 Ribosomal small subunit pseudouridine synthase A cofit 88 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2980 tRNA pseudouridine synthase A (EC 4.2.1.70) insig. 90 90
o Pseudomonas syringae pv. syringae B728a Psyr_1390 RNA-binding S4 insig. 78 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1390 RNA-binding S4 insig. 78 100
o Pseudomonas sp. SVBP6 COO64_RS19990 rRNA pseudouridine synthase insig. 65 100
o Pseudomonas segetis P6 ACVTMO_RS16405 rRNA pseudouridine synthase insig. 60 100
o Pseudomonas putida KT2440 PP_1191 S4 domain protein insig. 56 100
o Pseudomonas sp. BP01 JOY50_RS01950 rRNA pseudouridine synthase insig. 56 100
o Lysobacter sp. OAE881 ABIE51_RS13020 rRNA pseudouridine synthase insig. 58 100
o Pseudomonas aeruginosa MRSN321 DY961_RS06900 rRNA pseudouridine synthase insig. 55 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS45935 rRNA pseudouridine synthase insig. 55 100
o Pseudomonas aeruginosa PA14 IKLFDK_05110 RNA-binding protein insig. 54 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1469.1 tRNA pseudouridine synthase A (EC 4.2.1.70) insig. 53 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS18320 rRNA pseudouridine synthase insig. 52 100
o Rhodanobacter denitrificans MT42 LRK55_RS15640 rRNA pseudouridine synthase insig. 52 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS15885 rRNA pseudouridine synthase insig. 52 100
o Rhodanobacter sp. FW510-T8 OKGIIK_04535 rsuA RNA-binding protein insig. 51 100
o Pseudomonas sp. S08-1 OH686_05400 Pseudouridine synthase insig. 51 100
o Pseudomonas stutzeri RCH2 Psest_2917 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases insig. 48 100
o Acidovorax sp. GW101-3H11 Ac3H11_1984 tRNA pseudouridine synthase A (EC 4.2.1.70) insig. 48 99
  Dechlorosoma suillum PS Dsui_2759 pseudouridine synthase family protein insig. 43 98
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF631 tRNA pseudouridine synthase A (EC 4.2.1.70) insig. 41 99
  Methylophilus sp. DMC18 GFF2067 hypothetical protein insig. 41 98
o Variovorax sp. OAS795 ABID97_RS06090 RNA pseudouridine synthase insig. 45 98
o Castellaniella sp019104865 MT123 ABCV34_RS03070 pseudouridine synthase insig. 39 99
o Herbaspirillum seropedicae SmR1 HSERO_RS10860 RNA pseudouridylate synthase insig. 42 100
o Burkholderia phytofirmans PsJN BPHYT_RS12155 RNA-binding protein S4 insig. 37 98
o Variovorax sp. SCN45 GFF4531 Pseudouridine synthase insig. 40 98
  Paraburkholderia graminis OAS925 ABIE53_002509 23S rRNA pseudouridine2604 synthase insig. 37 98
  Ralstonia solanacearum GMI1000 RS_RS07030 16S rRNA uridine-516 pseudouridylate synthase sig. 38 98
  Ralstonia solanacearum PSI07 RPSI07_RS17115 16S rRNA uridine-516 pseudouridylate synthase sig. 39 98
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS00360 16S rRNA pseudouridylate synthase sig. 39 98
  Ralstonia solanacearum UW163 UW163_RS13690 16S rRNA pseudouridylate synthase insig. 39 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00606 23S rRNA pseudouridine2604 synthase insig. 37 95
  Variovorax sp. OAS795 ABID97_RS00980 pseudouridine synthase strong 37 100
  Cupriavidus basilensis FW507-4G11 RR42_RS11890 16S rRNA pseudouridylate synthase insig. 35 98
  Acidovorax sp. GW101-3H11 Ac3H11_4641 tRNA pseudouridine synthase A (EC 4.2.1.70) sig. 35 98
  Variovorax sp. SCN45 GFF3530 Pseudouridine synthase insig. 35 100
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF343 tRNA pseudouridine synthase A (EC 4.2.1.70) cofit 34 98
  Ralstonia sp. UNC404CL21Col ABZR87_RS11810 pseudouridine synthase insig. 36 98
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07850 pseudouridine synthase insig. 32 99
  Paraburkholderia sabiae LMG 24235 QEN71_RS06405 pseudouridine synthase cofit 39 98
  Caulobacter crescentus NA1000 CCNA_00898 ribosomal large subunit pseudouridine synthase F cofit 31 99
  Caulobacter crescentus NA1000 Δfur CCNA_00898 ribosomal large subunit pseudouridine synthase F cofit 31 99
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08925 23S rRNA pseudouridine synthase F insig. 28 97
  Vibrio cholerae E7946 ATCC 55056 CSW01_11335 23S rRNA pseudouridine(2604) synthase RluF insig. 28 99
  Marinobacter adhaerens HP15 HP15_886 pseudouridine synthase family 1 protein insig. 29 97
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08930 hypothetical protein insig. 28 98
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS11165 pseudouridine synthase no data 24 99
  Desulfovibrio vulgaris Miyazaki F DvMF_0369 pseudouridine synthase (RefSeq) sig. 29 97
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1010 pseudouridine synthase insig. 24 98
  Bacteroides thetaiotaomicron VPI-5482 BT3872 ribosomal large subunit pseudouridine synthase B (NCBI ptt file) no data 26 97
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0719 pseudouridine synthase no data 27 97
  Lysobacter sp. OAE881 ABIE51_RS12720 pseudouridine synthase insig. 27 97
  Phocaeicola dorei CL03T12C01 ABI39_RS08040 pseudouridine synthase no data 27 99
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00420 pseudouridine synthase no data 27 99
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17510 pseudouridylate synthase strong 26 97
  Bacteroides stercoris CC31F HMPREF1181_RS07005 pseudouridine synthase no data 24 99
  Vibrio cholerae E7946 ATCC 55056 CSW01_08220 16S rRNA pseudouridine(516) synthase insig. 24 97
  Alteromonas macleodii MIT1002 MIT1002_01776 Ribosomal large subunit pseudouridine synthase F insig. 25 98
  Rhizobium sp. OAE497 ABIE40_RS15330 pseudouridine synthase cofit 26 97
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1362 Ribosomal large subunit pseudouridine synthase F (EC 4.2.1.70) insig. 26 97
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01375 pseudouridine synthase insig. 24 97
  Enterobacter sp. TBS_079 MPMX20_00237 Dual-specificity RNA pseudouridine synthase RluF insig. 26 99
  Enterobacter asburiae PDN3 EX28DRAFT_4322 pseudouridine synthase insig. 26 99
  Rhodanobacter sp. FW510-T8 OKGIIK_16610 Pseudouridine synthase insig. 24 97
  Pseudomonas aeruginosa PUPa3 DQ20_RS44005 16S rRNA pseudouridine(516) synthase insig. 23 97
  Rhodanobacter denitrificans MT42 LRK55_RS06765 pseudouridine synthase insig. 25 97
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08410 pseudouridine synthase insig. 27 97
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07025 pseudouridine synthase insig. 25 97
  Klebsiella pneumoniae MKP103 KDGMDA_10215 23S rRNA pseudouridine(2604) synthase RluF insig. 25 97
  Klebsiella pneumoniae MRSN742743 KFA93_RS21885 rluF;go_function=RNA 23S rRNA pseudouridine(2604) synthase RluF sig. 25 97
  Pseudomonas aeruginosa PA14 IKLFDK_03105 Ribosomal small subunit pseudouridine synthase A insig. 24 97
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1843.1 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 23 97
  Pantoea sp. MT58 IAI47_19435 23S rRNA pseudouridine(2604) synthase RluF insig. 25 99
  Escherichia coli BL21 ECD_03894 23S rRNA pseudouridine(2604) synthase insig. 25 97
  Escherichia coli BW25113 b4022 yjbC 23S rRNA pseudouridine synthase (NCBI) sig. 25 97
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS19615 rluF 23S rRNA pseudouridine(2604) synthase RluF cofit 25 99
  Lysobacter sp. OAE881 ABIE51_RS18480 pseudouridine synthase cofit 26 97
  Escherichia fergusonii Becca EFB2_04580 Dual-specificity RNA pseudouridine synthase RluF insig. 25 97
  Escherichia coli ECOR38 HEPCGN_11820 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 25 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04027 23S rRNA pseudouridine(2604) synthase insig. 25 97
  Escherichia coli Nissle 1917 ECOLIN_RS23225 23S rRNA pseudouridine(2604) synthase RluF insig. 25 97
  Escherichia coli ECRC100 OKFHMN_13190 rluF 23S rRNA pseudouridine(2604) synthase RluF cofit 25 97
  Escherichia coli ECRC101 MCAODC_03690 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 25 97
  Escherichia coli ECRC102 NIAGMN_10940 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 25 97
  Escherichia coli ECRC62 BNILDI_06155 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 25 97
  Escherichia coli ECRC98 JDDGAC_16815 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 25 97
  Escherichia coli ECRC99 KEDOAH_14970 rluF 23S rRNA pseudouridine(2604) synthase RluF no data 25 97
  Klebsiella michiganensis M5al BWI76_RS01755 23S rRNA pseudouridine synthase F insig. 25 97
  Escherichia coli ECOR27 NOLOHH_05365 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 25 97
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19110 23S rRNA pseudouridine synthase F insig. 24 97
  Shewanella loihica PV-4 Shew_2975 pseudouridine synthase (RefSeq) insig. 25 97
  Rahnella sp. WP5 EX31_RS06075 23S rRNA pseudouridine(2604) synthase RluF insig. 24 97
  Fusobacterium nucleatum SB010 HUW76_04625 rRNA pseudouridine synthase cofit 23 97
  Rhodanobacter sp. FW510-T8 OKGIIK_06590 Pseudouridine synthase insig. 27 97
  Magnetospirillum magneticum AMB-1 AMB_RS20865 rRNA pseudouridine synthase cofit 27 97
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00665 rRNA pseudouridine synthase insig. 27 97
  Rhodanobacter denitrificans MT42 LRK55_RS00435 pseudouridine synthase cofit 27 97
  Erwinia tracheiphila SCR3 LU632_RS22175 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 26 97
  Erwinia amylovora T8 OLJFJH_05535 23S rRNA pseudouridine(2604) synthase RluF sig. 25 99
  Serratia liquefaciens MT49 IAI46_21130 23S rRNA pseudouridine(2604) synthase RluF insig. 25 99
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS09485 rRNA pseudouridine synthase insig. 26 97
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_08325 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 25 97
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS16400 pseudouridine synthase cofit 23 97
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_16035 rsuA 16S rRNA pseudouridine(516) synthase RsuA cofit 25 99
  Dinoroseobacter shibae DFL-12 Dshi_2790 RNA-binding S4 domain protein (RefSeq) insig. 27 97
  Synechococcus elongatus PCC 7942 Synpcc7942_1010 ribosomal large subunit pseudouridine synthase B strong 26 98
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18660 pseudouridine synthase no data 24 96
  Dickeya dadantii 3937 DDA3937_RS09160 16S rRNA pseudouridine(516) synthase RsuA insig. 24 97
  Sinorhizobium meliloti 1021 SMc00904 hypothetical protein sig. 26 98
  Escherichia coli ECOR38 HEPCGN_22625 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 25 97
  Escherichia coli BL21 ECD_02113 16S rRNA pseudouridine(516) synthase insig. 25 97
  Escherichia fergusonii Becca EFB2_01673 Ribosomal small subunit pseudouridine synthase A insig. 25 97
  Escherichia coli ECOR27 NOLOHH_14935 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 25 97
  Escherichia coli ECRC100 OKFHMN_23360 rsuA 16S rRNA pseudouridine(516) synthase RsuA cofit 25 97
  Escherichia coli ECRC101 MCAODC_14410 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 25 97
  Escherichia coli ECRC102 NIAGMN_21125 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 25 97
  Escherichia coli ECRC62 BNILDI_13855 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 25 97
  Escherichia coli ECRC98 JDDGAC_27320 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 25 97
  Escherichia coli ECRC99 KEDOAH_04825 rsuA 16S rRNA pseudouridine(516) synthase RsuA no data 25 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01526 Ribosomal small subunit pseudouridine synthase A insig. 25 97
  Escherichia coli Nissle 1917 ECOLIN_RS12760 16S rRNA pseudouridine(516) synthase RsuA no data 25 97
  Escherichia coli BW25113 b2183 rsuA 16S rRNA pseudouridylate 516 synthase (NCBI) strong 25 97
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0245 pseudouridine synthase insig. 25 93
  Pseudomonas aeruginosa MRSN321 DY961_RS08850 pseudouridine synthase insig. 24 97
  Dechlorosoma suillum PS Dsui_0824 pseudouridine synthase family protein insig. 20 92
  Bifidobacterium breve UCC2003 BBR_RS15700 rRNA pseudouridine synthase no data 24 99
  Dickeya dianthicola 67-19 HGI48_RS09200 16S rRNA pseudouridine(516) synthase RsuA insig. 24 97
  Mycobacterium tuberculosis H37Rv Rv1711 Conserved hypothetical protein no data 27 97
  Serratia liquefaciens MT49 IAI46_17345 16S rRNA pseudouridine(516) synthase RsuA insig. 24 97
  Variovorax sp. SCN45 GFF3076 SSU rRNA pseudouridine(516) synthase (EC 5.4.99.19) insig. 22 92
  Cellulophaga baltica 18 M666_RS18620 23S rRNA pseudouridine(2604) synthase RluF insig. 22 99
  Variovorax sp. OAS795 ABID97_RS09900 16S rRNA pseudouridine(516) synthase insig. 23 92
  Serratia liquefaciens MT49 IAI46_13995 23S rRNA pseudouridine(2605) synthase RluB insig. 28 90
  Caulobacter crescentus NA1000 CCNA_00230 ribosomal large subunit pseudouridine synthase B sig. 25 94
  Caulobacter crescentus NA1000 Δfur CCNA_00230 ribosomal large subunit pseudouridine synthase B cofit 25 94
  Pseudomonas putida KT2440 PP_1409 ribosomal small subunit pseudouridine synthase A insig. 25 97
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4611.1 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 24 96
  Dickeya dianthicola ME23 DZA65_RS09500 16S rRNA pseudouridine(516) synthase RsuA insig. 23 97
  Shewanella loihica PV-4 Shew_3180 pseudouridine synthase (RefSeq) insig. 21 97
  Erwinia tracheiphila SCR3 LU632_RS17595 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 24 97
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4091.1 Pseudouridylate synthase insig. 26 97
  Lysobacter sp. OAE881 ABIE51_RS06125 pseudouridine synthase insig. 26 91
  Bacteroides ovatus ATCC 8483 BACOVA_00362 pseudouridylate synthase no data 22 86
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3753 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 23 97
  Cellulophaga baltica 18 M666_RS02705 pseudouridine synthase no data 22 97
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS25065 pseudouridylate synthase no data 25 97
  Shewanella amazonensis SB2B Sama_2937 pseudouridine synthase, Rsu (RefSeq) insig. 25 97
  Ralstonia solanacearum GMI1000 RS_RS03390 16S rRNA pseudouridine(516) synthase insig. 22 92
  Caulobacter crescentus NA1000 CCNA_01915 ribosomal small subunit pseudouridine synthase A strong 23 96
  Caulobacter crescentus NA1000 Δfur CCNA_01915 ribosomal small subunit pseudouridine synthase A cofit 23 96
  Rahnella sp. WP5 EX31_RS19195 16S rRNA pseudouridine(516) synthase RsuA insig. 22 97
  Dickeya dianthicola 67-19 HGI48_RS10500 23S rRNA pseudouridine(2605) synthase RluB sig. 26 89
  Dickeya dianthicola ME23 DZA65_RS10980 23S rRNA pseudouridine(2605) synthase RluB sig. 26 89
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS12840 rRNA pseudouridine synthase insig. 24 97
  Pectobacterium carotovorum WPP14 HER17_RS10900 23S rRNA pseudouridine(2605) synthase RluB strong 26 89
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15935 rRNA pseudouridine synthase strong 24 97
  Ralstonia sp. UNC404CL21Col ABZR87_RS08605 pseudouridine synthase insig. 23 99
  Rhodanobacter denitrificans MT42 LRK55_RS15690 pseudouridine synthase cofit 24 97
  Shewanella loihica PV-4 Shew_0916 pseudouridine synthase (RefSeq) insig. 22 97
  Pseudomonas sp. SVBP6 COO64_RS15465 pseudouridine synthase insig. 29 52
  Pseudomonas fluorescens SBW25 PFLU_RS26510 pseudouridine synthase insig. 26 75
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26510 pseudouridine synthase insig. 26 75
  Pseudomonas sp. S08-1 OH686_05950 SSU rRNA pseudouridine(516) synthase insig. 26 97
  Magnetospirillum magneticum AMB-1 AMB_RS12445 rRNA pseudouridine synthase insig. 24 97
  Phaeobacter inhibens DSM 17395 PGA1_c22020 putative ribosomal large subunit pseudouridine synthase B insig. 28 70
  Pseudomonas segetis P6 ACVTMO_RS05370 pseudouridine synthase insig. 27 52
  Shewanella amazonensis SB2B Sama_2614 pseudouridine synthase, Rsu (RefSeq) insig. 27 97
  Dinoroseobacter shibae DFL-12 Dshi_2908 pseudouridine synthase (RefSeq) insig. 27 53
  Pseudomonas stutzeri RCH2 Psest_0568 pseudouridine synthase insig. 26 52
  Acinetobacter baumannii LAC-4 RR41_RS07045 rRNA pseudouridine synthase sig. 23 92
  Serratia liquefaciens MT49 IAI46_19150 23S rRNA pseudouridine(2604) synthase RluF insig. 22 98
  Alteromonas macleodii MIT1002 MIT1002_01435 Ribosomal large subunit pseudouridine synthase B cofit 26 89
  Pseudomonas segetis P6 ACVTMO_RS06785 pseudouridine synthase insig. 24 97
  Ralstonia solanacearum PSI07 RPSI07_RS20655 16S rRNA pseudouridine(516) synthase insig. 24 90
  Klebsiella michiganensis M5al BWI76_RS19810 16S rRNA pseudouridine(516) synthase no data 24 97
  Shewanella sp. ANA-3 Shewana3_0916 pseudouridine synthase, Rsu (RefSeq) insig. 22 97
  Pseudomonas sp. BP01 JOY50_RS14575 pseudouridine synthase insig. 21 97
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS12605 16S rRNA pseudouridine(516) synthase insig. 23 90
  Ralstonia solanacearum UW163 UW163_RS00960 16S rRNA pseudouridine(516) synthase insig. 23 90
  Sphingobium sp. HT1-2 GFF872 LSU rRNA pseudouridine(2457) synthase (EC 5.4.99.20) cofit 26 69
  Pseudomonas simiae WCS417 PS417_24580 pseudouridine synthase sig. 26 75
  Erwinia amylovora T8 OLJFJH_11710 16S rRNA pseudouridine(516) synthase RsuA insig. 24 97
  Pectobacterium carotovorum WPP14 HER17_RS12950 16S rRNA pseudouridine(516) synthase RsuA insig. 22 97
  Pseudomonas sp. DMC3 GFF3909 Ribosomal large subunit pseudouridine synthase E insig. 27 52
  Synechocystis sp000284455 PCC 6803 SGL_RS12865 pseudouridine synthase strong 27 97
  Pantoea sp. MT58 IAI47_09210 23S rRNA pseudouridine(2605) synthase RluB sig. 25 90
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS09340 rluB 23S rRNA pseudouridine(2605) synthase RluB strong 25 90
  Enterobacter asburiae PDN3 EX28DRAFT_0378 pseudouridine synthase insig. 23 97
  Rhodanobacter sp. FW510-T8 OKGIIK_09050 Pseudouridine synthase insig. 24 97
  Pseudomonas syringae pv. syringae B728a Psyr_3981 ribosomal small subunit pseudouridine synthase A insig. 28 61
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3981 ribosomal small subunit pseudouridine synthase A insig. 28 61
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05064 Ribosomal large subunit pseudouridine synthase E insig. 26 75
  Marinobacter adhaerens HP15 HP15_2675 pseudouridine synthase, Rsu insig. 23 97
  Shewanella loihica PV-4 Shew_2246 pseudouridine synthase (RefSeq) sig. 29 62
  Kangiella aquimarina DSM 16071 B158DRAFT_2311 ribosomal large subunit pseudouridine synthase B (EC 5.4.99.-) strong 25 64
  Sphingobium sp. HT1-2 GFF1634 LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) cofit 27 75
  Pseudomonas aeruginosa PUPa3 DQ20_RS48340 pseudouridine synthase sig. 25 75
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2722 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) insig. 27 52
  Pseudomonas segetis P6 ACVTMO_RS14420 rluB 23S rRNA pseudouridine(2605) synthase RluB insig. 26 97
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2719 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) sig. 25 90
  Pseudomonas fluorescens SBW25 PFLU_RS07085 pseudouridine synthase insig. 23 97
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07085 pseudouridine synthase insig. 23 97
  Pseudomonas fluorescens FW300-N2C3 AO356_04690 16S rRNA pseudouridine(516) synthase insig. 23 97
  Paraburkholderia graminis OAS925 ABIE53_003276 16S rRNA pseudouridine516 synthase insig. 23 92
  Pseudomonas aeruginosa PA14 IKLFDK_20470 Ribosomal large subunit pseudouridine synthase E insig. 26 52
  Pseudomonas fluorescens FW300-N2E3 AO353_06330 pseudouridine synthase insig. 26 52
  Escherichia fergusonii Becca EFB2_02658 Ribosomal large subunit pseudouridine synthase B insig. 25 91
  Escherichia coli Nissle 1917 ECOLIN_RS07635 23S rRNA pseudouridine(2605) synthase RluB insig. 25 91
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4535 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 24 97
  Pseudomonas aeruginosa MRSN321 DY961_RS13015 pseudouridine synthase strong 26 52
  Klebsiella pneumoniae MKP103 KDGMDA_26750 16S rRNA pseudouridine(516) synthase RsuA insig. 23 97
  Klebsiella pneumoniae MRSN742743 KFA93_RS06395 rsuA;inference=COORDINATES 16S rRNA pseudouridine(516) synthase RsuA sig. 23 97
  Xanthobacter sp. DMC5 GFF108 hypothetical protein insig. 28 88
  Azospirillum sp. SherDot2 MPMX19_00077 Ribosomal large subunit pseudouridine synthase E insig. 27 70
  Pseudomonas sp. RS175 PFR28_03839 Ribosomal large subunit pseudouridine synthase E insig. 27 52
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5028 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) insig. 26 52
  Pseudomonas protegens RBAN4 FABNJH_27385 Pseudouridine synthase insig. 26 52
  Pseudomonas orientalis W4I3 QF045_RS26865 pseudouridine synthase insig. 26 75
  Escherichia coli BL21 ECD_01245 23S rRNA pseudouridine(2605) synthase strong 25 91
  Escherichia coli ECOR27 NOLOHH_20295 rluB 23S rRNA pseudouridine(2605) synthase RluB strong 25 91
  Escherichia coli ECOR38 HEPCGN_25560 rluB 23S rRNA pseudouridine(2605) synthase RluB sig. 25 91
  Escherichia coli ECRC100 OKFHMN_02630 rluB 23S rRNA pseudouridine(2605) synthase RluB cofit 25 91
  Escherichia coli ECRC101 MCAODC_15635 rluB 23S rRNA pseudouridine(2605) synthase RluB sig. 25 91
  Escherichia coli ECRC102 NIAGMN_26800 rluB 23S rRNA pseudouridine(2605) synthase RluB no data 25 91
  Escherichia coli ECRC62 BNILDI_18445 rluB 23S rRNA pseudouridine(2605) synthase RluB strong 25 91
  Escherichia coli ECRC98 JDDGAC_05175 rluB 23S rRNA pseudouridine(2605) synthase RluB insig. 25 91
  Escherichia coli ECRC99 KEDOAH_26135 rluB 23S rRNA pseudouridine(2605) synthase RluB no data 25 91
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02415 Ribosomal large subunit pseudouridine synthase B strong 25 91
  Escherichia coli BW25113 b1269 rluB 23S rRNA pseudouridylate synthase (NCBI) strong 25 91
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3297 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 25 97
  Pseudomonas orientalis W4I3 QF045_RS09740 16S rRNA pseudouridine(516) synthase cofit 24 97
  Fusobacterium nucleatum SB010 HUW76_04445 rRNA pseudouridine synthase cofit 23 50
  Vibrio cholerae E7946 ATCC 55056 CSW01_05785 23S rRNA pseudouridine synthase E insig. 26 53
  Dickeya dadantii 3937 DDA3937_RS10500 23S rRNA pseudouridine(2605) synthase RluB strong 25 89
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02130 pseudouridine synthase sig. 24 52
  Enterobacter sp. TBS_079 MPMX20_03149 Ribosomal small subunit pseudouridine synthase A insig. 23 97
  Pseudomonas sp. RS175 PFR28_03314 hypothetical protein no data 25 58