Homologs of Echvi_2376 from Echinicola vietnamensis KMM 6221, DSM 17526

tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
SEED: tRNA-i(6)A37 methylthiotransferase
KEGG: bifunctional enzyme involved in thiolation and methylation of tRNA

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2376 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB strong 100 100
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05315 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 72 98
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18330 MiaB/RimO family radical SAM methylthiotransferase insig. 63 97
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS21675 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 67 93
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS11280 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 54 97
o Phocaeicola dorei CL03T12C01 ABI39_RS05650 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 54 97
o Bacteroides ovatus ATCC 8483 BACOVA_02895 tRNA-i(6)A37 thiotransferase enzyme MiaB insig. 52 97
o Bacteroides thetaiotaomicron VPI-5482 BT3195 conserved hypothetical protein (NCBI ptt file) strong 52 97
o Bacteroides stercoris CC31F HMPREF1181_RS01770 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB sig. 53 97
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS17135 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 55 93
o Dinoroseobacter shibae DFL-12 Dshi_1019 RNA modification enzyme, MiaB family (RefSeq) insig. 38 93
o Alteromonas macleodii MIT1002 MIT1002_01480 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB insig. 39 93
o Erwinia tracheiphila SCR3 LU632_RS16305 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 40 93
o Pseudomonas sp. S08-1 OH686_09215 tRNA-i(6)A37 thiotransferase enzyme MiaB insig. 38 93
o Castellaniella sp019104865 MT123 ABCV34_RS15345 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 38 94
o Pectobacterium carotovorum WPP14 HER17_RS15165 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 39 93
o Escherichia coli ECRC62 BNILDI_21610 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 38 93
o Klebsiella michiganensis M5al BWI76_RS08135 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB no data 38 93
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04239 tRNA-i(6)A37 thiotransferase enzyme MiaB insig. 38 93
o Escherichia coli BL21 ECD_00629 tRNA-i(6)A37 methylthiotransferase strong 38 93
o Escherichia fergusonii Becca EFB2_03438 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase insig. 38 93
o Escherichia coli ECOR27 NOLOHH_23605 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 38 93
o Escherichia coli ECOR38 HEPCGN_01005 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 38 93
o Escherichia coli ECRC100 OKFHMN_07225 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 38 93
o Escherichia coli ECRC101 MCAODC_26440 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 38 93
o Escherichia coli ECRC102 NIAGMN_05280 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 38 93
o Escherichia coli ECRC98 JDDGAC_10870 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 38 93
o Escherichia coli ECRC99 KEDOAH_20745 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB no data 38 93
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03051 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase cofit 38 93
o Escherichia coli BW25113 b0661 miaB isopentenyl-adenosine A37 tRNA methylthiolase (NCBI) sig. 38 93
o Dechlorosoma suillum PS Dsui_1194 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB cofit 37 93
o Rahnella sp. WP5 EX31_RS23205 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 38 93
o Escherichia coli Nissle 1917 ECOLIN_RS03555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB no data 38 93
o Burkholderia phytofirmans PsJN BPHYT_RS16535 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase sig. 38 93
o Paraburkholderia sabiae LMG 24235 QEN71_RS02195 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 37 93
o Herbaspirillum seropedicae SmR1 HSERO_RS03615 (dimethylallyl)adenosine tRNA methylthiotransferase insig. 37 94
o Shewanella amazonensis SB2B Sama_2575 tRNA-i(6)A37 modification enzyme MiaB (RefSeq) strong 38 93
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4579 tRNA-i(6)A37 methylthiotransferase strong 37 93
o Shewanella sp. ANA-3 Shewana3_1008 tRNA-i(6)A37 thiotransferase enzyme MiaB (RefSeq) strong 37 93
o Shewanella oneidensis MR-1 SO1181 miaB tRNA-i(6)A37 modification enzyme MiaB (NCBI ptt file) strong 37 93
o Fusobacterium nucleatum SB010 HUW76_07655 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 38 93
o Phaeobacter inhibens DSM 17395 PGA1_c04710 (dimethylallyl)adenosine tRNA methylthiotransferase MiaB sig. 38 93
o Acidovorax sp. GW101-3H11 Ac3H11_4008 tRNA-i(6)A37 methylthiotransferase insig. 39 93
o Dickeya dianthicola 67-19 HGI48_RS06295 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 37 93
o Cupriavidus basilensis FW507-4G11 RR42_RS02855 dimethylallyladenosine tRNA methylthiotransferase insig. 36 93
o Dickeya dadantii 3937 DDA3937_RS06250 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 37 93
o Dickeya dianthicola ME23 DZA65_RS06640 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 37 93
o Kangiella aquimarina DSM 16071 B158DRAFT_0099 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB sig. 36 93
o Pseudomonas stutzeri RCH2 Psest_0532 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB sig. 38 93
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14720 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 36 94
o Enterobacter sp. TBS_079 MPMX20_01311 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase insig. 37 93
o Serratia liquefaciens MT49 IAI46_06025 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 37 93
o Shewanella loihica PV-4 Shew_2923 tRNA-i(6)A37 thiotransferase enzyme MiaB (RefSeq) strong 36 93
o Enterobacter asburiae PDN3 EX28DRAFT_2310 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB insig. 37 92
o Vibrio cholerae E7946 ATCC 55056 CSW01_04915 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 38 93
o Lysobacter sp. OAE881 ABIE51_RS15455 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 35 96
o Agrobacterium fabrum C58 Atu0356 miaB protein sig. 36 93
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF613 tRNA-i(6)A37 methylthiotransferase cofit 38 93
o Pseudomonas fluorescens FW300-N2C3 AO356_15410 (dimethylallyl)adenosine tRNA methylthiotransferase insig. 38 87
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5018 tRNA-i(6)A37 methylthiotransferase sig. 38 87
o Variovorax sp. SCN45 GFF7320 tRNA-i(6)A37 methylthiotransferase (EC 2.8.4.3) insig. 36 93
o Ralstonia sp. UNC404CL21Col ABZR87_RS07780 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 37 93
o Pantoea sp. MT58 IAI47_13945 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 36 93
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS11825 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 37 93
o Ralstonia solanacearum UW163 UW163_RS01760 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 37 93
o Pseudomonas fluorescens SBW25 PFLU_RS26555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 37 93
o Pseudomonas fluorescens SBW25-INTG PFLU_RS26555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB sig. 37 93
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2224.1 tRNA-i(6)A37 methylthiotransferase strong 36 93
o Rhodanobacter sp. FW510-T8 OKGIIK_02990 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 36 93
o Pseudomonas sp. RS175 PFR28_03848 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase insig. 38 87
o Pseudomonas syringae pv. syringae B728a Psyr_4345 tRNA-i(6)A37 thiotransferase enzyme MiaB sig. 37 93
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4345 tRNA-i(6)A37 thiotransferase enzyme MiaB insig. 37 93
o Pseudomonas simiae WCS417 PS417_24625 (dimethylallyl)adenosine tRNA methylthiotransferase sig. 37 93
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1380 tRNA-i(6)A37 methylthiotransferase insig. 37 93
o Variovorax sp. OAS795 ABID97_RS06475 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 37 93
o Marinobacter adhaerens HP15 HP15_2466 tRNA-i(6)A37 thiotransferase enzyme MiaB strong 35 93
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2712 tRNA-i(6)A37 methylthiotransferase sig. 36 93
o Pseudomonas fluorescens FW300-N2E3 AO353_06375 (dimethylallyl)adenosine tRNA methylthiotransferase sig. 36 93
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS09895 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB sig. 35 93
o Ralstonia solanacearum PSI07 RPSI07_RS21380 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 37 93
o Bosea sp. OAE506 ABIE41_RS04495 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 36 93
o Acinetobacter radioresistens SK82 MPMX26_02667 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase cofit 35 98
o Rhodanobacter denitrificans MT42 LRK55_RS13465 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB sig. 36 93
o Rhizobium sp. OAE497 ABIE40_RS01705 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 35 93
o Synechococcus elongatus PCC 7942 Synpcc7942_2374 tRNA-i(6)A37 thiotransferase enzyme MiaB strong 35 93
o Ralstonia solanacearum GMI1000 RS_RS02645 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 36 93
o Sinorhizobium meliloti 1021 SMc01115 (dimethylallyl)adenosine tRNA methylthiotransferase insig. 34 93
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS13750 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB sig. 35 93
o Mycobacterium tuberculosis H37Rv Rv2733c Conserved hypothetical alanine, arginine-rich protein sig. 35 92
o Rhodospirillum rubrum S1H Rru_A3770 tRNA-i(6)A37 modification enzyme MiaB (NCBI) strong 36 86
o Rhodopseudomonas palustris CGA009 TX73_002325 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 34 93
o Desulfovibrio vulgaris Hildenborough JW710 DVU0984 miaB tRNA-i(6)A37 modification enzyme MiaB (TIGR) sig. 35 93
o Caulobacter crescentus NA1000 CCNA_00054 tRNA 2-methylthioadenosine synthase strong 35 93
o Caulobacter crescentus NA1000 Δfur CCNA_00054 tRNA 2-methylthioadenosine synthase cofit 35 93
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1604 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB insig. 34 93
o Magnetospirillum magneticum AMB-1 AMB_RS22585 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase insig. 33 91
o Azospirillum sp. SherDot2 MPMX19_02511 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase insig. 32 93
o Desulfovibrio vulgaris Miyazaki F DvMF_1330 RNA modification enzyme, MiaB family (RefSeq) strong 36 84
o Azospirillum brasilense Sp245 AZOBR_RS01475 (dimethylallyl)adenosine tRNA methylthiotransferase insig. 32 93
o Bifidobacterium breve UCC2003 BBR_RS16570 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 31 95