| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2188 | | Methyltransferase domain. | strong | 100 | 100 |
| | Mycobacterium tuberculosis H37Rv | Rv3030 | | Conserved protein | no data | 34 | 54 |
| | Paraburkholderia graminis OAS925 | ABIE53_001147 | | ubiquinone/menaquinone biosynthesis C-methylase UbiE/glycosyltransferase involved in cell wall biosynthesis/regulator of replication initiation timing | strong | 32 | 59 |
| | Shewanella oneidensis MR-1 | SO3266 | | conserved domain protein (NCBI ptt file) | insig. | 33 | 64 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS18760 | | glycosyltransferase | strong | 33 | 55 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS05645 | | glycosyltransferase | strong | 32 | 54 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS33185 | | methyltransferase type 11 | strong | 29 | 48 |
| | Paraburkholderia graminis OAS925 | ABIE53_001949 | | SAM-dependent methyltransferase | strong | 32 | 43 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1903 | | hypothetical protein | strong | 31 | 50 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS23400 | | class I SAM-dependent methyltransferase | insig. | 26 | 52 |
| | Sphingobium sp. HT1-2 | GFF3861 | | 3-demethylubiquinol 3-O-methyltransferase (EC 2.1.1.64) @ 2-polyprenyl-6-hydroxyphenyl methylase (EC 2.1.1.222) | no data | 33 | 49 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_01230 | | class I SAM-dependent methyltransferase | cofit | 28 | 48 |
| | Dechlorosoma suillum PS | Dsui_1767 | | methyltransferase family protein | insig. | 33 | 40 |
| | Pseudomonas sp. S08-1 | OH686_16710 | | Glycosyltransferase | insig. | 29 | 61 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS01720 | | hypothetical protein | insig. | 27 | 48 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_10780 | | class I SAM-dependent methyltransferase | insig. | 32 | 40 |
| | Rhodospirillum rubrum S1H | Rru_A1529 | | Transcriptional Regulator, ArsR family (NCBI) | cofit | 27 | 57 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_21090 | | trans-aconitate methyltransferase | insig. | 26 | 44 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS07225 | | class I SAM-dependent methyltransferase | insig. | 28 | 38 |
| | Ralstonia solanacearum UW163 | UW163_RS06395 | | class I SAM-dependent methyltransferase | insig. | 28 | 38 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1 | | Trans-aconitate 2-methyltransferase (EC 2.1.1.144) | insig. | 26 | 44 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_25200 | | 23S rRNA (guanine(745)-N(1))-methyltransferase | insig. | 33 | 40 |
| | Rhodospirillum rubrum S1H | Rru_A2123 | | hypothetical protein (NCBI) | insig. | 31 | 63 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1301 | | Methyltransferase domain | strong | 28 | 51 |
| | Azospirillum sp. SherDot2 | MPMX19_02672 | | Ubiquinone biosynthesis O-methyltransferase | no data | 28 | 45 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00737 | | Methylase involved in ubiquinone/menaquinone biosynthesis | sig. | 28 | 44 |
| | Ralstonia solanacearum GMI1000 | RS_RS15160 | | class I SAM-dependent methyltransferase | insig. | 28 | 38 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS10020 | | class I SAM-dependent methyltransferase | insig. | 28 | 38 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS02885 | | class I SAM-dependent methyltransferase | insig. | 27 | 38 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4540 | | Trans-aconitate 2-methyltransferase (EC 2.1.1.144) | insig. | 26 | 48 |
| | Caulobacter crescentus NA1000 | CCNA_01922 | | SAM-dependent methyltransferase | strong | 31 | 47 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_01922 | | SAM-dependent methyltransferase | cofit | 31 | 47 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS08525 | | SAM-dependent methyltransferase | insig. | 29 | 43 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0330 | | hypothetical protein | insig. | 29 | 42 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0330 | | hypothetical protein | insig. | 29 | 42 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS03900 | | class I SAM-dependent methyltransferase | cofit | 31 | 38 |
| | Shewanella amazonensis SB2B | Sama_2034 | | methyltransferase (RefSeq) | insig. | 29 | 60 |
| | Mycobacterium tuberculosis H37Rv | Rv0089 | | Possible methyltransferase/methylase | insig. | 27 | 49 |
| | Xanthobacter sp. DMC5 | GFF169 | | Ubiquinone biosynthesis O-methyltransferase, mitochondrial | insig. | 28 | 50 |
| | Pseudomonas simiae WCS417 | PS417_25365 | | trans-aconitate methyltransferase | insig. | 26 | 43 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1408 | mapA | membrane-associated protein | insig. | 30 | 38 |
| | Rhodospirillum rubrum S1H | Rru_A0742 | | Ubiquinone biosynthesis O-methyltransferase (NCBI) | no data | 25 | 46 |
| | Azospirillum sp. SherDot2 | MPMX19_00634 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | cofit | 29 | 48 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS03430 | | SAM-dependent methyltransferase | insig. | 29 | 50 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0427 | | conserved hypothetical protein | insig. | 28 | 55 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0427 | | conserved hypothetical protein | insig. | 28 | 55 |
| | Mycobacterium tuberculosis H37Rv | Rv2952 | | Possible methyltransferase (methylase) | insig. | 28 | 54 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_05181 | | Trans-aconitate 2-methyltransferase | cofit | 26 | 43 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1218 | | S-adenosyl-L-methionine dependent methyltransferase, similar to cyclopropane-fatty-acyl-phospholipid synthase | insig. | 26 | 47 |
| | Pseudomonas sp. DMC3 | GFF4682 | | Ubiquinone biosynthesis O-methyltransferase | no data | 28 | 43 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2171 | | 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) | no data | 28 | 43 |
| | Pseudomonas sp. RS175 | PFR28_02884 | | Trans-aconitate 2-methyltransferase | insig. | 27 | 47 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS14495 | | bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG | no data | 26 | 44 |
| | Pseudomonas sp. S08-1 | OH686_12015 | | hypothetical protein | strong | 28 | 38 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS08070 | | bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | no data | 28 | 43 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS08070 | | bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | no data | 28 | 43 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01756 | | Ubiquinone biosynthesis O-methyltransferase | no data | 28 | 43 |
| | Pseudomonas sp. SVBP6 | COO64_RS06630 | | class I SAM-dependent methyltransferase | cofit | 35 | 38 |
| | Klebsiella michiganensis M5al | BWI76_RS17920 | | 23S rRNA (guanine(745)-N(1))-methyltransferase | insig. | 32 | 40 |
| | Azospirillum brasilense Sp245 | AZOBR_RS19390 | | methyltransferase | sig. | 29 | 51 |
| | Azospirillum brasilense Sp245 | AZOBR_RS09535 | | ArsR family transcriptional regulator | strong | 26 | 49 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_09520 | ubiG | bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG | no data | 26 | 46 |
| | Variovorax sp. OAS795 | ABID97_RS02175 | | class I SAM-dependent methyltransferase | strong | 25 | 67 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_03940 | | methyltransferase type 12 | insig. | 25 | 40 |
| | Lysobacter sp. OAE881 | ABIE51_RS13490 | | bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG | no data | 25 | 42 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS09935 | | trans-aconitate 2-methyltransferase | no data | 24 | 41 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3650 | | 3-demethylubiquinone-9 3-methyltransferase | no data | 29 | 43 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3650 | | 3-demethylubiquinone-9 3-methyltransferase | no data | 29 | 43 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_02095 | | 3-demethylubiquinone-9 3-methyltransferase | no data | 28 | 43 |
| | Pseudomonas simiae WCS417 | PS417_08100 | | 3-demethylubiquinone-9 3-methyltransferase | no data | 27 | 43 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS05220 | | S-adenosyl-L-methionine (SAM)-dependent methyltransferase PhcB | insig. | 29 | 53 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2525 | | 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) | no data | 28 | 43 |
| | Bosea sp. OAE506 | ABIE41_RS02030 | | class I SAM-dependent methyltransferase | insig. | 28 | 38 |
| | Pseudomonas sp. BP01 | JOY50_RS16160 | ubiG | bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG | no data | 27 | 43 |
| | Pseudomonas putida KT2440 | PP_1765 | | Ubiquinone biosynthesis O-methyltransferase | no data | 27 | 43 |
| | Mycobacterium tuberculosis H37Rv | Rv2258c | | Possible transcriptional regulatory protein | insig. | 27 | 59 |
| | Variovorax sp. SCN45 | GFF2415 | | Trans-aconitate 2-methyltransferase (EC 2.1.1.144) | insig. | 25 | 38 |
| | Agrobacterium fabrum C58 | Atu2124 | | transcriptional regulator, ArsR family | sig. | 29 | 46 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1849 | | Conserved domain protein | cofit | 28 | 62 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS06060 | | class I SAM-dependent methyltransferase | insig. | 29 | 39 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_356 | | 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) | no data | 27 | 43 |
| | Bosea sp. OAE506 | ABIE41_RS02980 | | class I SAM-dependent methyltransferase | insig. | 26 | 46 |
| | Escherichia coli ECRC100 | OKFHMN_09990 | ubiE | SAM-dependent methyltransferase | insig. | 25 | 55 |
| | Escherichia coli ECRC101 | MCAODC_00505 | ubiE | SAM-dependent methyltransferase | insig. | 25 | 55 |
| | Escherichia coli ECRC102 | NIAGMN_07840 | ubiE | SAM-dependent methyltransferase | insig. | 25 | 55 |
| | Escherichia coli ECRC98 | JDDGAC_13585 | ubiE | SAM-dependent methyltransferase | insig. | 25 | 55 |
| | Escherichia coli ECRC99 | KEDOAH_18165 | ubiE | SAM-dependent methyltransferase | no data | 25 | 55 |
| | Azospirillum brasilense Sp245 | AZOBR_RS18885 | | 3-demethylubiquinone-9 3-methyltransferase | no data | 25 | 45 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS05985 | | class I SAM-dependent methyltransferase | insig. | 24 | 78 |
| | Pseudomonas orientalis W4I3 | QF045_RS27340 | | trans-aconitate 2-methyltransferase | insig. | 24 | 48 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_19210 | | SAM-dependent methyltransferase | sig. | 33 | 43 |
| | Escherichia coli ECRC62 | BNILDI_15805 | rlmA | 23S rRNA (guanine(745)-N(1))-methyltransferase | insig. | 35 | 40 |
| | Shewanella oneidensis MR-1 | SO1988 | | hypothetical methyltransferase (NCBI ptt file) | insig. | 33 | 36 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS29785 | | methyltransferase domain-containing protein | no data | 32 | 41 |
| | Mycobacterium tuberculosis H37Rv | Rv1523 | | Probable methyltransferase | insig. | 30 | 37 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00644 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | cofit | 30 | 49 |
| | Pseudomonas segetis P6 | ACVTMO_RS14400 | ubiG | bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG | no data | 28 | 43 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0323 | | Cyclopropane fatty acid synthase and related methyltransferases | insig. | 27 | 67 |
| | Caulobacter crescentus NA1000 | CCNA_02985 | | methyltransferase | sig. | 27 | 40 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_02985 | | methyltransferase | cofit | 27 | 40 |