Homologs of Echvi_1304 from Echinicola vietnamensis KMM 6221, DSM 17526

RNA polymerase sigma factor, sigma-70 family
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1304 RNA polymerase sigma factor, sigma-70 family insig. 100 100
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS09150 sigma-70 family RNA polymerase sigma factor insig. 44 80
o Bacteroides ovatus ATCC 8483 BACOVA_00397 Sigma-70 region 2 sig. 42 81
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS02825 sigma-70 family RNA polymerase sigma factor insig. 38 88
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1840.1 FIG01210863: hypothetical protein insig. 37 85
o Rhodanobacter denitrificans MT42 LRK55_RS02580 sigma-70 family RNA polymerase sigma factor insig. 38 83
o Bacteroides stercoris CC31F HMPREF1181_RS04660 sigma-70 family RNA polymerase sigma factor insig. 39 81
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12735 RNA polymerase subunit sigma-70 insig. 34 83
  Bacteroides thetaiotaomicron VPI-5482 BT0248 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 38 79
  Bacteroides thetaiotaomicron VPI-5482 BT2184 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 36 81
o Cellulophaga baltica 18 M666_RS11290 sigma-70 family RNA polymerase sigma factor insig. 34 85
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14620 hypothetical protein insig. 35 81
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS07350 sigma-70 family RNA polymerase sigma factor insig. 33 81
  Bacteroides thetaiotaomicron VPI-5482 BT2492 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 31 83
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07715 RNA polymerase sigma factor no data 28 84
  Caulobacter crescentus NA1000 CCNA_03419 RNA polymerase ECF-type sigma factor sig. 28 85
  Caulobacter crescentus NA1000 Δfur CCNA_03419 RNA polymerase ECF-type sigma factor cofit 28 85
  Cellulophaga baltica 18 M666_RS05355 sigma-70 family RNA polymerase sigma factor insig. 33 65
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS10600 RNA polymerase subunit sigma-24 strong 30 73
  Dechlorosoma suillum PS Dsui_2453 RNA polymerase sigma factor RpoE no data 27 79
  Lysobacter sp. OAE881 ABIE51_RS16295 sigma-70 family RNA polymerase sigma factor insig. 26 84
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04360 sigma-70 family RNA polymerase sigma factor insig. 26 84
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS16905 sigma-70 family RNA polymerase sigma factor insig. 30 80
  Burkholderia phytofirmans PsJN BPHYT_RS14405 RNA polymerase sigma factor RpoE no data 26 89
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04355 RNA polymerase, sigma-24 subunit, RpoE no data 26 89
  Paraburkholderia graminis OAS925 ABIE53_003043 RNA polymerase sigma-70 factor (ECF subfamily) strong 26 89
  Paraburkholderia sabiae LMG 24235 QEN71_RS04575 RNA polymerase sigma factor RpoE strong 27 84
  Xanthobacter sp. DMC5 GFF1406 RNA polymerase sigma-H factor insig. 26 82
  Kangiella aquimarina DSM 16071 B158DRAFT_2180 RNA polymerase, sigma-24 subunit, RpoE strong 26 79
  Phocaeicola dorei CL03T12C01 ABI39_RS12815 sigma-70 family RNA polymerase sigma factor insig. 30 80
  Herbaspirillum seropedicae SmR1 HSERO_RS09625 RNA polymerase sigma factor RpoE no data 26 83
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18855 RNA polymerase sigma factor insig. 28 68
  Alteromonas macleodii MIT1002 MIT1002_04051 Sigma-24 insig. 25 78
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15190 RNA polymerase sigma factor insig. 26 80
  Shewanella loihica PV-4 Shew_1048 RNA polymerase sigma factor RpoE (RefSeq) cofit 24 83
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4578 RNA polymerase sigma factor, sigma-70 family insig. 21 80
  Bacteroides ovatus ATCC 8483 BACOVA_04312 Sigma-70 region 2 insig. 28 68
  Klebsiella pneumoniae MKP103 KDGMDA_28480 RNA polymerase sigma factor RpoE no data 26 83
  Klebsiella pneumoniae MRSN742743 GJGHJB_01209 rpoE RNA polymerase sigma factor RpoE no data 26 83
  Rhodanobacter denitrificans MT42 LRK55_RS16655 RNA polymerase sigma factor RpoE no data 24 83
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16940 RNA polymerase sigma factor RpoE strong 24 83
  Cupriavidus basilensis FW507-4G11 RR42_RS14080 RNA polymerase sigma factor RpoE strong 24 83
  Klebsiella michiganensis M5al BWI76_RS21355 RNA polymerase sigma factor RpoE no data 26 83
  Shewanella oneidensis MR-1 SO1342 rpoE RNA polymerase sigma-24 factor (NCBI ptt file) no data 24 83
  Bacteroides thetaiotaomicron VPI-5482 BT1572 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 28 68
  Shewanella amazonensis SB2B Sama_2611 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 26 81
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS12005 RNA polymerase sigma factor RpoE no data 24 91
  Shewanella sp. ANA-3 Shewana3_3032 RNA polymerase sigma factor RpoE (RefSeq) no data 24 83
  Pectobacterium carotovorum WPP14 HER17_RS05780 RNA polymerase sigma factor RpoE no data 26 83
  Sphingobium sp. HT1-2 GFF5151 RNA polymerase ECF-type sigma factor cofit 26 91
  Bacteroides stercoris CC31F HMPREF1181_RS08110 sigma-70 family RNA polymerase sigma factor insig. 28 83
  Rahnella sp. WP5 EX31_RS21800 RNA polymerase sigma factor RpoE no data 26 83
  Alteromonas macleodii MIT1002 MIT1002_03807 Sigma-W factor insig. 25 88
  Rhodanobacter sp. FW510-T8 OKGIIK_07900 rpoE RNA polymerase sigma factor RpoE strong 24 91
  Pseudomonas sp. S08-1 OH686_20045 RNA polymerase sigma factor RpoE strong 25 83
  Marinobacter adhaerens HP15 HP15_775 RNA polymerase sigma-70 RpoE type insig. 28 78
  Phocaeicola dorei CL03T12C01 ABI39_RS00235 sigma-70 family RNA polymerase sigma factor sig. 27 79
  Serratia liquefaciens MT49 IAI46_19585 RNA polymerase sigma factor RpoE no data 25 83
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS07720 sigma-70 family RNA polymerase sigma factor strong 27 79
  Azospirillum sp. SherDot2 MPMX19_05214 ECF RNA polymerase sigma factor SigE insig. 26 82
  Alteromonas macleodii MIT1002 MIT1002_02719 Sigma-24 no data 21 83
  Shewanella sp. ANA-3 Shewana3_0763 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 25 68
  Pseudomonas syringae pv. syringae B728a Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE strong 24 83
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE strong 24 83
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3635.1 RNA polymerase ECF-type sigma factor insig. 24 79
  Pseudomonas fluorescens SBW25 PFLU_RS07230 RNA polymerase sigma factor RpoE sig. 25 83
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07230 RNA polymerase sigma factor RpoE strong 25 83
  Pseudomonas segetis P6 ACVTMO_RS06940 rpoE RNA polymerase sigma factor RpoE strong 25 83
  Pseudomonas sp. DMC3 GFF2277 RNA polymerase sigma-H factor cofit 25 83
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01572 RNA polymerase sigma-H factor cofit 25 83
  Pseudomonas protegens RBAN4 FABNJH_07555 algU alginate biosynthesis protein AlgZ/FimS insig. 25 83
  Pseudomonas sp. RS175 PFR28_00690 RNA polymerase sigma-H factor strong 25 83
  Pseudomonas orientalis W4I3 QF045_RS09835 RNA polymerase sigma factor RpoE cofit 25 83
  Pseudomonas simiae WCS417 PS417_07120 RNA polymerase sigma-H factor strong 25 83
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4516 RNA polymerase sigma-H factor AlgT sig. 25 83
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3323 RNA polymerase sigma-H factor AlgT no data 25 83
  Pseudomonas fluorescens FW300-N2E3 AO353_17625 RNA polymerase subunit sigma strong 25 83
  Pseudomonas fluorescens FW300-N2C3 AO356_04575 RNA polymerase subunit sigma strong 25 83
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2756 RNA polymerase sigma-H factor AlgT strong 25 83
  Pantoea sp. MT58 IAI47_04850 RNA polymerase sigma factor RpoE no data 27 83
  Pseudomonas sp. BP01 JOY50_RS14665 rpoE RNA polymerase sigma factor RpoE insig. 25 83
  Pseudomonas sp. SVBP6 COO64_RS16525 rpoE RNA polymerase sigma factor RpoE insig. 25 83
  Pseudomonas putida KT2440 PP_1427 RNA polymerase sigma E factor sig. 25 83
  Bacteroides thetaiotaomicron VPI-5482 BT1817 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 27 80
  Escherichia coli BL21 ECD_02467 RNA polymerase sigma E factor no data 27 83
  Escherichia fergusonii Becca EFB2_01323 ECF RNA polymerase sigma-E factor no data 27 83
  Escherichia coli ECOR27 NOLOHH_13050 rpoE RNA polymerase sigma factor RpoE no data 27 83
  Escherichia coli ECOR38 HEPCGN_20520 rpoE RNA polymerase sigma factor RpoE no data 27 83
  Escherichia coli ECRC100 OKFHMN_21375 rpoE RNA polymerase sigma factor RpoE no data 27 83
  Escherichia coli ECRC101 MCAODC_11905 rpoE RNA polymerase sigma factor RpoE no data 27 83
  Escherichia coli ECRC102 NIAGMN_19145 rpoE RNA polymerase sigma factor RpoE no data 27 83
  Escherichia coli ECRC62 BNILDI_11850 rpoE RNA polymerase sigma factor RpoE no data 27 83
  Escherichia coli ECRC98 JDDGAC_25040 rpoE RNA polymerase sigma factor RpoE no data 27 83
  Escherichia coli ECRC99 KEDOAH_06845 rpoE RNA polymerase sigma factor RpoE no data 27 83
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01134 ECF RNA polymerase sigma-E factor no data 27 83
  Escherichia coli Nissle 1917 ECOLIN_RS14560 RNA polymerase sigma factor RpoE no data 27 83
  Escherichia coli BW25113 b2573 rpoE RNA polymerase, sigma 24 (sigma E) factor (NCBI) no data 27 83
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14445 RNA polymerase sigma factor RpoE strong 23 83
  Ralstonia solanacearum GMI1000 RS_RS05225 RNA polymerase sigma factor RpoE strong 23 83
  Ralstonia solanacearum PSI07 RPSI07_RS19015 RNA polymerase sigma factor RpoE strong 23 83
  Ralstonia solanacearum UW163 UW163_RS11910 RNA polymerase sigma factor RpoE insig. 23 83
  Sphingobium sp. HT1-2 GFF4551 hypothetical protein cofit 26 72
  Dickeya dianthicola 67-19 HGI48_RS15850 RNA polymerase sigma factor RpoE cofit 26 83
  Dickeya dianthicola ME23 DZA65_RS16930 RNA polymerase sigma factor RpoE strong 26 83
  Castellaniella sp019104865 MT123 ABCV34_RS08355 RNA polymerase sigma factor RpoE strong 25 78
  Ralstonia sp. UNC404CL21Col ABZR87_RS10165 RNA polymerase sigma factor RpoE strong 24 83
  Pseudomonas stutzeri RCH2 Psest_3100 RNA polymerase sigma factor RpoE strong 24 83
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2107 RNA polymerase sigma factor RpoE no data 27 83
  Phocaeicola dorei CL03T12C01 ABI39_RS09920 sigma-70 family RNA polymerase sigma factor insig. 26 83
  Pseudomonas aeruginosa MRSN321 PFGADD_04374 algU alginate biosynthesis protein AlgZ/FimS strong 25 83
  Pseudomonas aeruginosa PA14 IKLFDK_03265 alginate biosynthesis protein AlgZ/FimS strong 25 83
  Pseudomonas aeruginosa PUPa3 NPBIFN_04430 algU alginate biosynthesis protein AlgZ/FimS strong 25 83
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07180 RNA polymerase sigma factor RpoE strong 23 83
  Sinorhizobium meliloti 1021 SM_b20592 RNA polymerase sigma factor insig. 23 82
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS01700 RNA polymerase sigma factor insig. 29 41
  Kangiella aquimarina DSM 16071 B158DRAFT_2027 RNA polymerase sigma factor, sigma-70 family insig. 26 66
  Enterobacter asburiae PDN3 EX28DRAFT_0072 RNA polymerase sigma factor RpoE no data 26 83
  Enterobacter sp. TBS_079 MPMX20_03444 ECF RNA polymerase sigma-E factor no data 26 83
  Erwinia amylovora T8 OLJFJH_10215 RNA polymerase sigma factor RpoE strong 26 83
  Sphingobium sp. HT1-2 GFF4975 RNA polymerase ECF-type sigma factor cofit 25 91
  Synechocystis sp000284455 PCC 6803 SGL_RS06480 sigma-70 family RNA polymerase sigma factor no data 25 82
  Shewanella oneidensis MR-1 SO3840 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) insig. 24 68
  Synechocystis sp000284455 PCC 6803 SGL_RS08165 sigma-70 family RNA polymerase sigma factor strong 23 89
  Pseudomonas putida KT2440 PP_3006 RNA polymerase sigma-70 factor, ECF subfamily insig. 27 79
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14290 sigma-70 family RNA polymerase sigma factor insig. 26 83
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS04580 sigma-70 family RNA polymerase sigma factor insig. 26 75
  Bacteroides ovatus ATCC 8483 BACOVA_00669 Sigma-70 region 2 insig. 26 83
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_01235 rpoE RNA polymerase sigma factor RpoE strong 26 83
  Dickeya dadantii 3937 DDA3937_RS15765 RNA polymerase sigma factor RpoE strong 26 83
  Bacteroides ovatus ATCC 8483 BACOVA_05165 Sigma-70 region 2 insig. 26 86
  Vibrio cholerae E7946 ATCC 55056 CSW01_12485 RNA polymerase sigma factor RpoE no data 23 83
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS05140 rpoE RNA polymerase sigma factor RpoE no data 27 83
  Phocaeicola dorei CL03T12C01 ABI39_RS18195 sigma-70 family RNA polymerase sigma factor insig. 26 68
  Bacteroides thetaiotaomicron VPI-5482 BT2044 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 25 83
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3492 RNA polymerase sigma factor, sigma-70 family strong 24 88
  Erwinia tracheiphila SCR3 LU632_RS15425 rpoE RNA polymerase sigma factor RpoE strong 26 83
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11965 RNA polymerase subunit sigma insig. 32 44
  Bacteroides thetaiotaomicron VPI-5482 BT4347 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 26 86
  Lysobacter sp. OAE881 ABIE51_RS13890 RNA polymerase sigma factor RpoE strong 25 78
  Alteromonas macleodii MIT1002 MIT1002_01278 RNA polymerase sigma factor SigV insig. 24 85
  Shewanella amazonensis SB2B Sama_0874 RNA polymerase sigma factor RpoE (RefSeq) strong 23 85
  Pseudomonas sp. BP01 JOY50_RS12975 sigma-70 family RNA polymerase sigma factor insig. 24 72
  Variovorax sp. OAS795 ABID97_RS28845 RNA polymerase sigma factor insig. 23 80
  Shewanella loihica PV-4 Shew_2433 RNA polymerase sigma factor (RefSeq) no data 26 70
  Pseudomonas sp. SVBP6 COO64_RS11395 RNA polymerase sigma factor insig. 30 62
  Pseudomonas putida KT2440 PP_4608 RNA polymerase sigma-70 factor, ECF subfamily insig. 30 77
  Rhodopseudomonas palustris CGA009 TX73_002850 sigma-70 family RNA polymerase sigma factor insig. 27 69
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01230 putative RNA polymerase sigma factor FecI insig. 26 84
  Pseudomonas orientalis W4I3 QF045_RS22815 RNA polymerase sigma factor SigX strong 24 77
  Rhizobium sp. OAE497 ABIE40_RS26955 sigma-70 family RNA polymerase sigma factor insig. 31 61
  Bacteroides stercoris CC31F HMPREF1181_RS05860 sigma-70 family RNA polymerase sigma factor insig. 27 76
  Pseudomonas fluorescens SBW25 PFLU_RS22600 RNA polymerase sigma factor SigX strong 24 77
  Pseudomonas fluorescens SBW25-INTG PFLU_RS22600 RNA polymerase sigma factor SigX strong 24 77
  Pseudomonas simiae WCS417 PS417_20990 RNA polymerase sigma factor SigX no data 24 77
  Pseudomonas fluorescens FW300-N2C3 AO356_02795 RNA polymerase subunit sigma no data 24 77
  Rhodanobacter denitrificans MT42 LRK55_RS05200 sigma-70 family RNA polymerase sigma factor insig. 24 72
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05425 sigma-70 family RNA polymerase sigma factor insig. 24 72
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS04205 sigma-70 family RNA polymerase sigma factor insig. 22 82
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02680 RNA polymerase subunit sigma-70 insig. 25 75
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS16945 RNA polymerase sigma factor sig. 34 43
  Caulobacter crescentus NA1000 CCNA_02977 RNA polymerase ECF-type sigma factor sigU strong 25 87
  Caulobacter crescentus NA1000 Δfur CCNA_02977 RNA polymerase ECF-type sigma factor sigU cofit 25 87
  Sinorhizobium meliloti 1021 SMc01419 RNA polymerase sigma factor protein sig. 24 79
  Pseudomonas syringae pv. syringae B728a Psyr_2096 Sigma-70 region 2 no data 24 77
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2096 Sigma-70 region 2 no data 24 77
  Phocaeicola dorei CL03T12C01 ABI39_RS12855 RNA polymerase sigma factor insig. 36 40
  Pseudomonas segetis P6 ACVTMO_RS12985 sigX RNA polymerase sigma factor SigX no data 24 77
  Pseudomonas fluorescens FW300-N2E3 AO353_00830 RNA polymerase subunit sigma no data 24 77
  Pseudomonas putida KT2440 PP_2088 RNA polymerase sigma factor SigX strong 23 77
  Pseudomonas aeruginosa MRSN321 PFGADD_03358 sigX RNA polymerase sigma factor SigX no data 24 77
  Pseudomonas aeruginosa PA14 IKLFDK_08585 RNA polymerase sigma factor SigX no data 24 77
  Pseudomonas aeruginosa PUPa3 NPBIFN_03394 sigX RNA polymerase sigma factor SigX no data 24 77
  Pseudomonas sp. BP01 JOY50_RS22140 sigX RNA polymerase sigma factor SigX insig. 23 77
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS18950 sigma-70 family RNA polymerase sigma factor insig. 22 81
  Bacteroides stercoris CC31F HMPREF1181_RS11830 sigma-70 family RNA polymerase sigma factor insig. 26 69
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02732 RNA polymerase sigma-70 factor, ECF subfamily insig. 24 68
  Pseudomonas sp. BP01 JOY50_RS15495 RNA polymerase sigma factor insig. 29 62
  Bacteroides stercoris CC31F HMPREF1181_RS02840 RNA polymerase sigma factor sig. 26 74
  Erwinia tracheiphila SCR3 LU632_RS03185 sigma-70 family RNA polymerase sigma factor strong 25 68
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2047 RNA polymerase sigma factor, sigma-70 family strong 26 76
  Bosea sp. OAE506 ABIE41_RS10280 sigma-70 family RNA polymerase sigma factor insig. 25 69
  Pseudomonas sp. SVBP6 COO64_RS05350 sigX RNA polymerase sigma factor SigX no data 23 77
  Pseudomonas stutzeri RCH2 Psest_3456 RNA polymerase sigma factor, sigma-70 family insig. 21 80
  Pseudomonas fluorescens SBW25 PFLU_RS05190 RNA polymerase sigma factor insig. 30 62
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05190 RNA polymerase sigma factor insig. 30 62
  Sphingobium sp. HT1-2 GFF2317 RNA polymerase ECF-type sigma factor cofit 25 84
  Pseudomonas simiae WCS417 PS417_11995 RNA polymerase sigma factor insig. 25 79
  Bacteroides stercoris CC31F HMPREF1181_RS12355 sigma-70 family RNA polymerase sigma factor insig. 24 69
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13725 sigma-70 family RNA polymerase sigma factor strong 23 82
  Rhodanobacter denitrificans MT42 LRK55_RS11045 sigma-70 family RNA polymerase sigma factor cofit 21 82
  Pseudomonas simiae WCS417 PS417_05120 RNA polymerase subunit sigma-24 insig. 29 62
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS09080 sigma-70 family RNA polymerase sigma factor cofit 28 78
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2774 RNA polymerase sigma factor, sigma-70 family insig. 28 42
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19950 RNA polymerase subunit sigma-24 insig. 27 86
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_05665 RNA polymerase subunit sigma strong 25 68
  Mycobacterium tuberculosis H37Rv Rv0182c Probable alternative RNA polymerase sigma factor SigG (RNA polymerase ECF type sigma factor) insig. 25 68
  Bacteroides thetaiotaomicron VPI-5482 BT4720 putative RNA polymerase ECF-type sigma factor (NCBI ptt file) cofit 22 77
  Pseudomonas protegens RBAN4 FABNJH_05120 RNA polymerase sigma factor insig. 30 62
  Sphingobium sp. HT1-2 GFF4485 RNA polymerase sigma factor cnrH cofit 25 81
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05905 sigma-70 family RNA polymerase sigma factor insig. 24 68
  Shewanella loihica PV-4 Shew_2956 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 23 80
  Shewanella sp. ANA-3 Shewana3_1453 RNA polymerase sigma factor (RefSeq) sig. 23 93
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11315 sigma-70 family RNA polymerase sigma factor insig. 21 82
  Pseudomonas orientalis W4I3 QF045_RS08105 RNA polymerase sigma factor insig. 29 62
  Bacteroides stercoris CC31F HMPREF1181_RS16950 RNA polymerase sigma factor strong 25 74
  Acidovorax sp. GW101-3H11 Ac3H11_1573 RNA polymerase sigma factor RpoE no data 25 81
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12805 RNA polymerase sigma factor strong 23 80
  Phocaeicola dorei CL03T12C01 ABI39_RS07815 RNA polymerase sigma factor strong 23 80
  Rhodanobacter sp. FW510-T8 OKGIIK_12575 rpoE RNA polymerase subunit sigma-24 insig. 20 85
  Rhodanobacter sp. FW510-T8 OKGIIK_13920 RNA polymerase subunit sigma insig. 28 65
  Synechococcus elongatus PCC 7942 Synpcc7942_1923 sigG RNA polymerase sigma factor RpoE strong 27 79
  Bacteroides stercoris CC31F HMPREF1181_RS02545 sigma-70 family RNA polymerase sigma factor insig. 23 76
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0443 RNA polymerase sigma factor, sigma-70 family insig. 21 80
  Variovorax sp. OAS795 ABID97_RS08330 RNA polymerase sigma factor RpoE strong 22 86
  Rhizobium sp. OAE497 ABIE40_RS18210 sigma-70 family RNA polymerase sigma factor insig. 26 71
  Methylophilus sp. DMC18 GFF2730 RNA polymerase sigma-H factor no data 25 76
  Bacteroides thetaiotaomicron VPI-5482 BT3269 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 25 61
  Bacteroides thetaiotaomicron VPI-5482 BT4571 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 21 86
  Dinoroseobacter shibae DFL-12 Dshi_3423 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 25 65
  Mycobacterium tuberculosis H37Rv Rv3911 Possible alternative RNA polymerase sigma factor SigM insig. 23 64
  Rhodanobacter sp. FW510-T8 OKGIIK_01380 rpoE RNA polymerase subunit sigma-24 insig. 22 66
  Pseudomonas fluorescens FW300-N2E3 AO353_04915 RNA polymerase subunit sigma-24 insig. 29 70
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03310 RNA polymerase sigma factor insig. 28 79
  Phocaeicola dorei CL03T12C01 ABI39_RS03415 RNA polymerase sigma-70 factor insig. 27 84
  Xanthobacter sp. DMC5 GFF2321 ECF RNA polymerase sigma factor EcfG no data 23 85
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3681.1 RNA polymerase sigma factor RpoE insig. 22 80
  Bacteroides ovatus ATCC 8483 BACOVA_05570 Sigma-70 region 2 strong 22 77
  Pseudomonas syringae pv. syringae B728a Psyr_0892 Sigma-70 region 2:Sigma-70 region 4 insig. 27 70
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0892 Sigma-70 region 2:Sigma-70 region 4 insig. 27 70
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS16435 RNA polymerase sigma-70 factor strong 26 82
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01799 RNA polymerase sigma-70 factor, ECF subfamily insig. 24 81
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07500 sigma-70 family RNA polymerase sigma factor insig. 28 68
  Bacteroides thetaiotaomicron VPI-5482 BT3993 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 27 77
  Phocaeicola dorei CL03T12C01 ABI39_RS12275 RNA polymerase sigma-70 factor insig. 26 82
  Variovorax sp. OAS795 ABID97_RS21865 sigma-70 family RNA polymerase sigma factor insig. 25 70
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05665 RNA polymerase sigma-70 factor insig. 25 63
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24900 RNA polymerase subunit sigma-70 insig. 25 82
  Pseudomonas fluorescens SBW25 PFLU_RS12745 RNA polymerase sigma factor insig. 23 89
  Pseudomonas fluorescens SBW25-INTG PFLU_RS12745 RNA polymerase sigma factor insig. 23 89
  Burkholderia phytofirmans PsJN BPHYT_RS25505 RNA polymerase sigma factor insig. 23 84
  Magnetospirillum magneticum AMB-1 AMB_RS14160 RNA polymerase sigma factor cofit 21 90
  Vibrio cholerae E7946 ATCC 55056 CSW01_05315 RNA polymerase subunit sigma insig. 21 93
  Azospirillum brasilense Sp245 AZOBR_RS28490 hypothetical protein sig. 26 82
  Phocaeicola dorei CL03T12C01 ABI39_RS11710 RNA polymerase sigma factor insig. 36 29
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13395 sigma-70 family RNA polymerase sigma factor cofit 29 66
  Pseudomonas sp. DMC3 GFF1893 putative RNA polymerase sigma factor FecI insig. 28 62
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19215 RNA polymerase subunit sigma sig. 26 68
  Dinoroseobacter shibae DFL-12 Dshi_2428 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 25 67
  Azospirillum sp. SherDot2 MPMX19_00764 ECF RNA polymerase sigma factor EcfG insig. 25 70
  Shewanella oneidensis MR-1 SO3096 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) strong 23 85