Homologs of BPHYT_RS01450 from Burkholderia phytofirmans PsJN

DNA-binding protein
SEED: Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake
KEGG: DNA processing protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Burkholderia phytofirmans PsJN BPHYT_RS01450 DNA-binding protein insig. 100 100
o Paraburkholderia graminis OAS925 ABIE53_000387 DNA processing protein insig. 76 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02242 DNA protecting protein DprA insig. 77 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS00150 DNA-processing protein DprA insig. 66 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS04985 DNA-processing protein DprA insig. 51 97
  Cupriavidus basilensis FW507-4G11 RR42_RS20480 DNA processing protein DprA insig. 63 72
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2571 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 49 98
o Dechlorosoma suillum PS Dsui_0819 DNA protecting protein DprA cofit 48 98
o Ralstonia solanacearum GMI1000 RS_RS00340 DNA-protecting protein DprA insig. 59 70
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS09755 DNA-protecting protein DprA insig. 58 70
o Ralstonia solanacearum UW163 UW163_RS03825 DNA-protecting protein DprA insig. 58 70
o Ralstonia solanacearum PSI07 RPSI07_RS23610 DNA-protecting protein DprA cofit 59 69
o Variovorax sp. OAS795 ABID97_RS01830 DNA-processing protein DprA insig. 46 97
o Herbaspirillum seropedicae SmR1 HSERO_RS23400 DNA processing protein DprA insig. 56 73
o Castellaniella sp019104865 MT123 ABCV34_RS14195 DNA-processing protein DprA insig. 44 98
o Acidovorax sp. GW101-3H11 Ac3H11_4411 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 44 98
o Variovorax sp. SCN45 GFF5489 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 46 91
o Rhodanobacter denitrificans MT42 LRK55_RS09785 DNA-processing protein DprA cofit 44 97
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10145 DNA-processing protein DprA sig. 44 97
o Rhodanobacter sp. FW510-T8 OKGIIK_13770 dprA DNA-processing protein DprA insig. 44 97
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS13870 DNA-processing protein DprA insig. 45 96
  Pseudomonas stutzeri RCH2 Psest_0025 DNA protecting protein DprA sig. 48 73
  Marinobacter adhaerens HP15 HP15_3746 DNA protecting protein DprA insig. 47 68
o Kangiella aquimarina DSM 16071 B158DRAFT_0400 DNA protecting protein DprA insig. 38 96
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4746.1 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 41 92
o Vibrio cholerae E7946 ATCC 55056 CSW01_00245 DNA-protecting protein DprA insig. 38 98
  Pseudomonas sp. S08-1 OH686_12505 DNA protecting protein DprA insig. 45 69
o Azospirillum brasilense Sp245 AZOBR_RS15885 DNA processing protein DprA insig. 38 95
  Pseudomonas putida KT2440 PP_0069 putative Rossmann fold nucleotide-binding protein sig. 45 70
  Pseudomonas fluorescens FW300-N2C3 AO356_11295 DNA processing protein DprA insig. 44 69
o Escherichia coli ECOR38 HEPCGN_16365 dprA DNA-protecting protein DprA cofit 39 83
o Escherichia fergusonii Becca EFB2_00538 hypothetical protein insig. 39 83
o Escherichia coli BL21 ECD_03136 DNA recombination-mediator A family protein insig. 39 83
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00418 hypothetical protein insig. 39 83
o Escherichia coli Nissle 1917 ECOLIN_RS18860 DNA-protecting protein DprA insig. 39 83
o Escherichia coli BW25113 b4473 smf hypothetical protein (NCBI) insig. 39 83
  Pseudomonas fluorescens SBW25 PFLU_RS00100 DNA-protecting protein DprA cofit 45 68
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00100 DNA-protecting protein DprA insig. 45 68
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4125 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 44 70
o Escherichia coli ECRC101 MCAODC_08065 dprA DNA-protecting protein DprA insig. 39 83
o Escherichia coli ECRC102 NIAGMN_15305 dprA DNA-protecting protein DprA insig. 39 83
o Escherichia coli ECRC98 JDDGAC_21165 dprA DNA-protecting protein DprA no data 39 83
o Klebsiella michiganensis M5al BWI76_RS25665 DNA-processing protein DprA insig. 39 83
  Shewanella sp. ANA-3 Shewana3_0037 DNA protecting protein DprA (RefSeq) insig. 48 53
  Pseudomonas syringae pv. syringae B728a Psyr_0021 DNA protecting protein DprA insig. 43 71
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0021 DNA protecting protein DprA insig. 43 71
o Escherichia coli ECRC62 BNILDI_02185 dprA DNA-protecting protein DprA insig. 39 83
  Shewanella oneidensis MR-1 SO0034 DNA processing protein DprA, putative (NCBI ptt file) insig. 47 53
o Escherichia coli ECRC99 KEDOAH_10605 dprA DNA-protecting protein DprA no data 39 83
  Pseudomonas fluorescens GW456-L13 PfGW456L13_648 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 44 70
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2393 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 39 83
o Escherichia coli ECOR27 NOLOHH_09335 dprA DNA-protecting protein DprA cofit 38 83
o Erwinia tracheiphila SCR3 LU632_RS22465 dprA DNA-protecting protein DprA insig. 35 97
  Pseudomonas fluorescens FW300-N2E3 AO353_10650 DNA processing protein DprA insig. 45 68
  Pseudomonas sp. RS175 PFR28_04659 hypothetical protein insig. 44 72
o Dickeya dianthicola 67-19 HGI48_RS19210 DNA-protecting protein DprA insig. 37 98
o Dickeya dianthicola ME23 DZA65_RS20335 DNA-protecting protein DprA insig. 37 98
o Enterobacter asburiae PDN3 EX28DRAFT_0042 DNA protecting protein DprA insig. 39 84
o Enterobacter sp. TBS_079 MPMX20_04193 hypothetical protein insig. 39 80
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1910 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 44 69
  Escherichia coli ECRC101 OKFHMN_17535 dprA DNA-protecting protein DprA insig. 46 57
  Shewanella amazonensis SB2B Sama_0045 DNA processing protein DprA, putative (RefSeq) insig. 47 53
o Pantoea sp. MT58 IAI47_02295 DNA-protecting protein DprA insig. 38 84
o Dickeya dadantii 3937 DDA3937_RS19120 DNA-protecting protein DprA insig. 35 98
o Azospirillum sp. SherDot2 MPMX19_01508 hypothetical protein insig. 36 97
o Shewanella loihica PV-4 Shew_3734 DNA protecting protein DprA (RefSeq) insig. 46 55
o Rahnella sp. WP5 EX31_RS15970 DNA-protecting protein DprA cofit 34 97
o Pectobacterium carotovorum WPP14 HER17_RS02230 DNA-protecting protein DprA insig. 37 83
o Lysobacter sp. OAE881 ABIE51_RS02235 DNA-processing protein DprA insig. 38 98
o Alteromonas macleodii MIT1002 MIT1002_00022 DNA protecting protein DprA insig. 35 81
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04240 DNA-processing protein DprA insig. 40 75
  Caulobacter crescentus NA1000 CCNA_02529 DNA recombination-mediator protein A, SMF family insig. 40 74
  Caulobacter crescentus NA1000 Δfur CCNA_02529 DNA recombination-mediator protein A, SMF family insig. 40 74
o Agrobacterium fabrum C58 Atu1305 DNA processing chain A insig. 36 95
o Bosea sp. OAE506 ABIE41_RS17215 DNA-processing protein DprA insig. 36 98
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2448 DNA protecting protein DprA insig. 42 67
o Serratia liquefaciens MT49 IAI46_23260 DNA-protecting protein DprA insig. 37 83
  Fusobacterium nucleatum SB010 HUW76_06810 DNA-protecting protein DprA strong 43 50
o Magnetospirillum magneticum AMB-1 AMB_RS03500 DNA-protecting protein DprA cofit 35 95
o Rhizobium sp. OAE497 ABIE40_RS07365 DNA-processing protein DprA insig. 36 97
  Desulfovibrio vulgaris Miyazaki F DvMF_0771 DNA protecting protein DprA (RefSeq) insig. 43 68
o Sinorhizobium meliloti 1021 SMc01363 hypothetical protein insig. 36 94
  Acinetobacter radioresistens SK82 MPMX26_00114 hypothetical protein insig. 46 50
  Synechococcus elongatus PCC 7942 Synpcc7942_0703 smf DNA processing protein DprA, putative insig. 41 65
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05335 DNA-processing protein DprA insig. 36 68
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_06145 DNA protecting protein DprA insig. 37 65
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04370 DNA protecting protein DprA insig. 28 95
  Rhodospirillum rubrum S1H Rru_A3194 SMF protein (NCBI) insig. 37 78
o Rhodopseudomonas palustris CGA009 TX73_016135 DNA-processing protein DprA insig. 35 93
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13955 DNA-processing protein DprA insig. 30 97
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3854 DNA protecting protein DprA insig. 29 95
  Desulfovibrio vulgaris Hildenborough JW710 DVU2069 dprA DNA processing protein DprA, putative (TIGR) insig. 40 77
o Phaeobacter inhibens DSM 17395 PGA1_c06230 putative protein Smf insig. 36 98
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS11685 DNA-protecting protein DprA insig. 28 97
o Phocaeicola dorei CL03T12C01 ABI39_RS05220 DNA-processing protein DprA insig. 29 97
  Dinoroseobacter shibae DFL-12 Dshi_1138 DNA protecting protein DprA (RefSeq) insig. 38 66
  Bacteroides thetaiotaomicron VPI-5482 BT3070 Smf protein DNA processing chain A (NCBI ptt file) insig. 33 70
  Bacteroides stercoris CC31F HMPREF1181_RS01510 DNA-protecting protein DprA insig. 33 71
  Bacteroides ovatus ATCC 8483 BACOVA_02721 DNA protecting protein DprA insig. 33 67
  Mycobacterium tuberculosis H37Rv Rv2896c Conserved hypothetical protein insig. 43 45