Homologs of BBR_RS13700 from Bifidobacterium breve UCC2003

diaminopimelate epimerase
SEED: Diaminopimelate epimerase (EC 5.1.1.7)
KEGG: diaminopimelate epimerase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Bifidobacterium breve UCC2003 BBR_RS13700 diaminopimelate epimerase strong 100 100
o Mycobacterium tuberculosis H37Rv Rv2726c Probable diaminopimelate epimerase DapF (DAP epimerase) no data 35 97
o Methanococcus maripaludis JJ MMJJ_RS00375 diaminopimelate epimerase no data 34 98
o Dechlorosoma suillum PS Dsui_0649 diaminopimelate epimerase no data 33 95
o Methanococcus maripaludis S2 MMP_RS04760 diaminopimelate epimerase no data 34 96
o Variovorax sp. SCN45 GFF4493 Diaminopimelate epimerase (EC 5.1.1.7) no data 33 97
o Bacteroides ovatus ATCC 8483 BACOVA_03762 diaminopimelate epimerase insig. 34 98
o Variovorax sp. OAS795 ABID97_RS06135 diaminopimelate epimerase no data 33 97
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF545 Diaminopimelate epimerase (EC 5.1.1.7) no data 30 96
o Synechococcus elongatus PCC 7942 Synpcc7942_1927 dapF diaminopimelate epimerase no data 34 97
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS15015 diaminopimelate epimerase no data 31 99
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS01230 diaminopimelate epimerase insig. 32 99
o Azospirillum sp. SherDot2 MPMX19_00602 Diaminopimelate epimerase no data 32 94
o Bacteroides thetaiotaomicron VPI-5482 BT0548 diaminopimelate epimerase (NCBI ptt file) cofit 33 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS10065 diaminopimelate epimerase no data 34 97
o Ralstonia solanacearum UW163 UW163_RS03515 diaminopimelate epimerase no data 34 97
o Phocaeicola dorei CL03T12C01 ABI39_RS14295 diaminopimelate epimerase cofit 32 98
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02200 diaminopimelate epimerase no data 35 82
  Paraburkholderia graminis OAS925 ABIE53_000428 diaminopimelate epimerase no data 34 82
o Ralstonia solanacearum PSI07 RPSI07_RS23305 diaminopimelate epimerase no data 33 98
  Burkholderia phytofirmans PsJN BPHYT_RS01665 diaminopimelate epimerase no data 33 82
o Paraburkholderia sabiae LMG 24235 QEN71_RS00365 diaminopimelate epimerase no data 33 82
o Acidovorax sp. GW101-3H11 Ac3H11_1993 Diaminopimelate epimerase (EC 5.1.1.7) no data 32 94
o Rhodanobacter sp. FW510-T8 OKGIIK_15335 dapF diaminopimelate epimerase no data 31 97
o Pantoea sp. MT58 IAI47_18410 diaminopimelate epimerase strong 30 96
o Alteromonas macleodii MIT1002 MIT1002_00159 Diaminopimelate epimerase no data 30 96
o Rhodospirillum rubrum S1H Rru_A1183 Diaminopimelate epimerase (NCBI) no data 32 94
o Herbaspirillum seropedicae SmR1 HSERO_RS21455 diaminopimelate epimerase no data 31 96
o Azospirillum brasilense Sp245 AZOBR_RS14160 diaminopimelate epimerase no data 31 94
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS08545 diaminopimelate epimerase no data 31 95
o Ralstonia sp. UNC404CL21Col ABZR87_RS05580 diaminopimelate epimerase sig. 32 97
o Cupriavidus basilensis FW507-4G11 RR42_RS01250 diaminopimelate epimerase no data 29 98
o Marinobacter adhaerens HP15 HP15_248 diaminopimelate epimerase no data 29 97
o Shewanella oneidensis MR-1 SO4308 dapF diaminopimelate epimerase (NCBI ptt file) no data 31 96
o Shewanella sp. ANA-3 Shewana3_0391 dapF diaminopimelate epimerase (RefSeq) no data 32 96
o Rhodanobacter denitrificans MT42 LRK55_RS08310 diaminopimelate epimerase no data 31 95
  Caulobacter crescentus NA1000 CCNA_03800 diaminopimelate epimerase no data 32 82
  Caulobacter crescentus NA1000 Δfur CCNA_03800 diaminopimelate epimerase no data 32 82
o Shewanella loihica PV-4 Shew_0323 dapF diaminopimelate epimerase (RefSeq) no data 29 96
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06915 diaminopimelate epimerase strong 32 96
o Dickeya dianthicola ME23 DZA65_RS21100 diaminopimelate epimerase no data 28 96
o Bacteroides stercoris CC31F HMPREF1181_RS16035 diaminopimelate epimerase insig. 31 97
o Castellaniella sp019104865 MT123 ABCV34_RS13465 diaminopimelate epimerase no data 29 99
o Dickeya dianthicola 67-19 HGI48_RS20055 diaminopimelate epimerase no data 28 96
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS23025 diaminopimelate epimerase no data 32 95
o Pectobacterium carotovorum WPP14 HER17_RS01340 diaminopimelate epimerase no data 28 96
o Escherichia coli BL21 ECD_03685 diaminopimelate epimerase strong 27 96
o Escherichia fergusonii Becca EFB2_04828 Diaminopimelate epimerase no data 27 96
o Escherichia coli ECOR27 NOLOHH_06560 dapF diaminopimelate epimerase no data 27 96
o Escherichia coli ECOR38 HEPCGN_13135 dapF diaminopimelate epimerase no data 27 96
o Escherichia coli ECRC101 OKFHMN_14430 dapF diaminopimelate epimerase no data 27 96
o Escherichia coli ECRC101 MCAODC_04935 dapF diaminopimelate epimerase no data 27 96
o Escherichia coli ECRC102 NIAGMN_12185 dapF diaminopimelate epimerase no data 27 96
o Escherichia coli ECRC62 BNILDI_04975 dapF diaminopimelate epimerase no data 27 96
o Escherichia coli ECRC98 JDDGAC_18055 dapF diaminopimelate epimerase no data 27 96
o Escherichia coli ECRC99 KEDOAH_13720 dapF diaminopimelate epimerase no data 27 96
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04241 Diaminopimelate epimerase no data 27 96
o Escherichia coli BW25113 b3809 dapF diaminopimelate epimerase (VIMSS) no data 27 96
o Escherichia coli Nissle 1917 ECOLIN_RS21865 diaminopimelate epimerase no data 27 96
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF237 Diaminopimelate epimerase (EC 5.1.1.7) no data 26 96
o Rahnella sp. WP5 EX31_RS15155 diaminopimelate epimerase insig. 28 96
o Ralstonia solanacearum GMI1000 RS_RS00675 diaminopimelate epimerase no data 33 98
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.845.1 Diaminopimelate epimerase (EC 5.1.1.7) no data 30 96
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1430 diaminopimelate epimerase no data 31 89
o Enterobacter asburiae PDN3 EX28DRAFT_4478 diaminopimelate epimerase (EC 5.1.1.7) strong 27 96
o Phaeobacter inhibens DSM 17395 PGA1_c33950 diaminopimelate epimerase DapF no data 30 97
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13290 diaminopimelate epimerase no data 33 90
o Magnetospirillum magneticum AMB-1 AMB_RS01095 diaminopimelate epimerase no data 29 93
o Dickeya dadantii 3937 DDA3937_RS19900 diaminopimelate epimerase no data 27 96
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19550 diaminopimelate epimerase no data 31 89
o Vibrio cholerae E7946 ATCC 55056 CSW01_00640 diaminopimelate epimerase no data 28 96
o Pseudomonas putida KT2440 PP_3790 diaminopimelate epimerase strong 29 91
o Enterobacter sp. TBS_079 MPMX20_04467 Diaminopimelate epimerase strong 27 96
o Serratia liquefaciens MT49 IAI46_00715 diaminopimelate epimerase no data 26 96
o Dinoroseobacter shibae DFL-12 Dshi_3228 Diaminopimelate epimerase (RefSeq) no data 31 93
o Kangiella aquimarina DSM 16071 B158DRAFT_0246 diaminopimelate epimerase (EC 5.1.1.7) no data 28 95
o Shewanella amazonensis SB2B Sama_3249 dapF diaminopimelate epimerase (RefSeq) no data 32 96
o Erwinia tracheiphila SCR3 LU632_RS24145 dapF diaminopimelate epimerase no data 27 96
o Lysobacter sp. OAE881 ABIE51_RS03025 diaminopimelate epimerase no data 32 94
o Acinetobacter radioresistens SK82 MPMX26_02231 Diaminopimelate epimerase no data 29 92
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS21670 diaminopimelate epimerase no data 29 92
o Klebsiella michiganensis M5al BWI76_RS01200 diaminopimelate epimerase strong 26 79
o Pseudomonas sp. S08-1 OH686_13795 diaminopimelate epimerase no data 29 80
  Rahnella sp. WP5 EX31_RS10160 diaminopimelate epimerase insig. 30 96
o Desulfovibrio vulgaris Hildenborough JW710 DVU1867 dapF diaminopimelate epimerase (TIGR) no data 29 95
o Pseudomonas simiae WCS417 PS417_15365 diaminopimelate epimerase insig. 29 95
o Pseudomonas stutzeri RCH2 Psest_3765 diaminopimelate epimerase no data 29 80
o Pseudomonas fluorescens FW300-N2C3 AO356_12735 diaminopimelate epimerase sig. 29 80
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4418 Diaminopimelate epimerase (EC 5.1.1.7) sig. 29 80
o Pseudomonas fluorescens FW300-N2E3 AO353_09040 diaminopimelate epimerase sig. 28 80
  Pseudomonas putida KT2440 PP_5228 diaminopimelate epimerase no data 29 80
  Pseudomonas simiae WCS417 PS417_27585 diaminopimelate epimerase sig. 29 80
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2173 Diaminopimelate epimerase (EC 5.1.1.7) strong 28 80
o Desulfovibrio vulgaris Miyazaki F DvMF_0561 dapF diaminopimelate epimerase (RefSeq) no data 32 60
o Pseudomonas sp. RS175 PFR28_04376 Diaminopimelate epimerase no data 30 80
o Pseudomonas fluorescens GW456-L13 PfGW456L13_844 Diaminopimelate epimerase (EC 5.1.1.7) insig. 29 80
  Pseudomonas fluorescens FW300-N2C3 AO356_20725 diaminopimelate epimerase insig. 29 83
o Pseudomonas fluorescens SBW25 PFLU_RS17335 diaminopimelate epimerase insig. 30 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS17335 diaminopimelate epimerase sig. 30 96
o Pseudomonas syringae pv. syringae B728a Psyr_0183 diaminopimelate epimerase no data 29 80