Homologs of ccmF from Desulfovibrio vulgaris Hildenborough JW710

ccmF: cytochrome c-type biogenesis protein CcmF (TIGR)
SEED: Cytochrome c heme lyase subunit CcmF
KEGG: cytochrome c-type biogenesis protein CcmF

135 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Desulfovibrio vulgaris Hildenborough JW710 DVU1050 ccmF cytochrome c-type biogenesis protein CcmF (TIGR) no data 100 100
o Desulfovibrio vulgaris Miyazaki F DvMF_3132 cytochrome c assembly protein (RefSeq) no data 70 100
  Desulfovibrio vulgaris Miyazaki F DvMF_0826 cytochrome c assembly protein (RefSeq) insig. 46 96
  Magnetospirillum magneticum AMB-1 AMB_RS21250 heme lyase CcmF/NrfE family subunit no data 36 92
  Pectobacterium carotovorum WPP14 HER17_RS09055 heme lyase CcmF/NrfE family subunit insig. 35 90
  Rahnella sp. WP5 EX31_RS19745 heme lyase CcmF/NrfE family subunit insig. 34 90
  Dechlorosoma suillum PS Dsui_1172 c-type cytochrome biogenesis protein CcmF no data 32 95
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS06445 heme lyase CcmF/NrfE family subunit no data 34 94
  Dinoroseobacter shibae DFL-12 Dshi_3411 cytochrome c-type biogenesis protein CcmF (RefSeq) sig. 32 94
  Pseudomonas protegens RBAN4 FABNJH_08750 ccmE cytochrome c maturation protein CcmE insig. 34 96
  Vibrio cholerae E7946 ATCC 55056 CSW01_10265 c-type cytochrome biogenesis protein CcmF strong 34 90
  Rhodopseudomonas palustris CGA009 TX73_009900 heme lyase CcmF/NrfE family subunit no data 34 93
  Dinoroseobacter shibae DFL-12 Dshi_3775 cytochrome c-type biogenesis protein CcmF (RefSeq) no data 34 92
  Dinoroseobacter shibae DFL-12 Dshi_4051 cytochrome c-type biogenesis protein CcmF (RefSeq) no data 34 92
  Serratia liquefaciens MT49 IAI46_18085 heme lyase CcmF/NrfE family subunit insig. 33 90
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01515 Cytochrome c-type biogenesis protein CcmF sig. 34 90
  Escherichia coli BL21 ECD_02123 heme lyase, CcmF subunit sig. 34 90
  Escherichia coli BW25113 b2196 ccmF heme lyase, CcmF subunit (NCBI) insig. 34 90
  Azospirillum brasilense Sp245 AZOBR_RS00740 heme lyase subunit CcmF no data 34 89
  Escherichia fergusonii Becca EFB2_01660 Cytochrome c-type biogenesis protein CcmF insig. 34 90
  Escherichia coli Nissle 1917 ECOLIN_RS12835 cytochrome c-type biogenesis heme lyase CcmF no data 34 90
  Pseudomonas sp. RS175 PFR28_00870 Cytochrome c-type biogenesis protein CcmF no data 34 96
  Pseudomonas segetis P6 ACVTMO_RS15395 heme lyase CcmF/NrfE family subunit no data 32 97
  Escherichia coli ECRC100 OKFHMN_23305 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 34 90
  Escherichia coli ECRC101 MCAODC_14355 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 34 90
  Escherichia coli ECRC102 NIAGMN_21070 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 34 90
  Escherichia coli ECRC62 BNILDI_13800 ccmF cytochrome c-type biogenesis heme lyase CcmF cofit 34 90
  Escherichia coli ECRC98 JDDGAC_27265 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 34 90
  Escherichia coli ECRC99 KEDOAH_04880 ccmF cytochrome c-type biogenesis heme lyase CcmF no data 34 90
  Pseudomonas fluorescens SBW25 PFLU_RS08670 heme lyase CcmF/NrfE family subunit cofit 33 96
  Pseudomonas fluorescens SBW25-INTG PFLU_RS08670 heme lyase CcmF/NrfE family subunit strong 33 96
  Pseudomonas orientalis W4I3 QF045_RS11430 heme lyase CcmF/NrfE family subunit no data 33 96
  Escherichia coli ECOR38 HEPCGN_22570 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 34 90
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4311 Cytochrome c heme lyase subunit CcmF no data 33 96
  Escherichia coli ECOR27 NOLOHH_14880 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 34 90
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2555 Cytochrome c heme lyase subunit CcmF no data 33 96
  Kangiella aquimarina DSM 16071 B158DRAFT_1328 c-type cytochrome biogenesis protein CcmF strong 32 93
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS06280 heme lyase CcmF/NrfE family subunit cofit 32 92
  Shewanella loihica PV-4 Shew_0193 cytochrome c-type biogenesis protein CcmF (RefSeq) strong 31 92
  Azospirillum sp. SherDot2 MPMX19_02533 Cytochrome c-type biogenesis protein CcmF no data 34 89
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01875 Cytochrome c-type biogenesis protein CcmF no data 33 96
  Pseudomonas fluorescens FW300-N2C3 AO356_03635 cytochrome C biogenesis protein CcmF no data 33 96
  Pantoea sp. MT58 IAI47_06090 heme lyase CcmF/NrfE family subunit cofit 32 92
  Pseudomonas simiae WCS417 PS417_08715 cytochrome C biogenesis protein CcmF no data 33 96
  Pseudomonas fluorescens FW300-N2E3 AO353_18875 cytochrome C biogenesis protein CcmF no data 33 96
  Erwinia amylovora T8 OLJFJH_11100 heme lyase NrfEFG subunit NrfE insig. 33 91
  Shewanella amazonensis SB2B Sama_0248 cytochrome c-type biogenesis protein CcmF (RefSeq) strong 31 92
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3644 Cytochrome c heme lyase subunit CcmF no data 33 96
  Pseudomonas sp. DMC3 GFF2490 Cytochrome c-type biogenesis protein CcmF no data 32 96
  Shewanella sp. ANA-3 Shewana3_0234 cytochrome c-type biogenesis protein CcmF (RefSeq) strong 31 92
  Klebsiella pneumoniae MKP103 KDGMDA_23845 cytochrome c maturation protein CcmE insig. 34 91
  Klebsiella pneumoniae MRSN742743 GJGHJB_02104 ccmE cytochrome c maturation protein CcmE insig. 33 91
  Pseudomonas sp. SVBP6 COO64_RS25715 heme lyase CcmF/NrfE family subunit no data 34 88
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3190.1 Cytochrome c heme lyase subunit CcmF insig. 33 96
  Xanthobacter sp. DMC5 GFF1779 Cytochrome c-type biogenesis protein CcmF no data 33 93
  Pseudomonas sp. BP01 JOY50_RS00480 heme lyase CcmF/NrfE family subunit no data 33 96
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2342.1 Cytochrome c heme lyase subunit CcmF no data 32 96
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4877 Cytochrome c heme lyase subunit CcmF no data 34 89
  Shewanella oneidensis MR-1 SO0266 ccmF-1 cytochrome c-type biogenesis protein CcmF (NCBI ptt file) strong 31 92
  Pseudomonas putida KT2440 PP_4322 holocytochrome c synthetase no data 33 96
  Lysobacter sp. OAE881 ABIE51_RS08700 heme lyase CcmF/NrfE family subunit strong 34 94
  Marinobacter adhaerens HP15 HP15_2281 cytochrome c assembly protein no data 33 92
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16065 heme lyase CcmF/NrfE family subunit no data 32 93
  Pseudomonas syringae pv. syringae B728a Psyr_3388 Cytochrome c-type biogenesis protein CcmF no data 33 96
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3388 Cytochrome c-type biogenesis protein CcmF no data 33 96
  Rhizobium sp. OAE497 ABIE40_RS05685 heme lyase CcmF/NrfE family subunit strong 32 93
  Agrobacterium fabrum C58 Atu0975 cytochrome c-type synthesis protein no data 33 93
  Rhodanobacter denitrificans MT42 LRK55_RS15815 heme lyase CcmF/NrfE family subunit no data 31 93
  Alteromonas macleodii MIT1002 MIT1002_00965 Cytochrome c-type biogenesis protein CcmF no data 31 90
  Phaeobacter inhibens DSM 17395 PGA1_c17010 cytochrome c-type biogenesis protein CcmF no data 32 89
  Pseudomonas aeruginosa MRSN321 PFGADD_03747 ccmF Cytochrome c-type biogenesis protein CcmF no data 34 89
  Pseudomonas stutzeri RCH2 Psest_1759 c-type cytochrome biogenesis protein CcmF no data 32 99
  Pseudomonas aeruginosa PA14 IKLFDK_07040 Cytochrome c-type biogenesis protein CcmF no data 35 89
  Pseudomonas aeruginosa PUPa3 NPBIFN_03788 ccmF Cytochrome c-type biogenesis protein CcmF no data 35 89
  Rhodanobacter sp. FW510-T8 OKGIIK_08585 ccmF c-type cytochrome biogenesis protein CcmF no data 33 92
  Pseudomonas sp. S08-1 OH686_02635 cytochrome c-type biogenesis protein CcmF no data 33 92
  Pectobacterium carotovorum WPP14 HER17_RS09015 heme lyase CcmF/NrfE family subunit cofit 34 93
  Rhodospirillum rubrum S1H Rru_A0035 Cytochrome c-type biogenesis protein CcmF (NCBI) no data 33 97
  Sphingobium sp. HT1-2 GFF83 Cytochrome c heme lyase subunit CcmF no data 32 93
  Bosea sp. OAE506 ABIE41_RS21455 heme lyase CcmF/NrfE family subunit no data 32 92
  Shewanella sp. ANA-3 Shewana3_0488 cytochrome c-type biogenesis protein CcmF (RefSeq) insig. 28 97
  Shewanella loihica PV-4 Shew_0347 cytochrome c assembly protein (RefSeq) insig. 29 91
  Shewanella oneidensis MR-1 SO0478 ccmF-2 cytochrome c-type biogenesis protein CcmF (NCBI ptt file) insig. 29 99
  Caulobacter crescentus NA1000 CCNA_02848 heme chaperone-apocytochrome heme-lyase strong 32 90
  Caulobacter crescentus NA1000 Δfur CCNA_02848 heme chaperone-apocytochrome heme-lyase cofit 32 90
  Sinorhizobium meliloti 1021 SMc02363 cytochrome C-type biogenesis transmembrane protein sig. 32 91
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS12730 heme lyase CcmF/NrfE family subunit no data 32 93
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10825 heme lyase CcmF/NrfE family subunit no data 31 91
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0172 Cytochrome c biogenesis factor strong 33 87
  Escherichia fergusonii Becca EFB2_04515 Cytochrome c-type biogenesis protein CcmF insig. 31 91
  Escherichia coli Nissle 1917 ECOLIN_RS23575 heme lyase CcmF/NrfE family subunit insig. 31 91
  Escherichia coli ECRC100 OKFHMN_12800 nrfF heme lyase NrfEFG subunit NrfF cofit 30 89
  Escherichia coli ECRC101 MCAODC_03310 nrfF heme lyase NrfEFG subunit NrfF insig. 30 89
  Escherichia coli ECRC102 NIAGMN_10645 nrfF heme lyase NrfEFG subunit NrfF insig. 30 89
  Escherichia coli ECRC98 JDDGAC_16435 nrfF heme lyase NrfEFG subunit NrfF insig. 30 89
  Escherichia coli ECRC99 KEDOAH_15350 nrfF heme lyase NrfEFG subunit NrfF no data 30 89
  Escherichia coli ECOR27 NOLOHH_05050 nrfF heme lyase NrfEFG subunit NrfF insig. 30 91
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03966 Cytochrome c-type biogenesis protein CcmF insig. 30 91
  Escherichia coli ECRC62 BNILDI_06475 ccmF Cytochrome c biogenesis protein CcmF insig. 30 91
  Escherichia coli ECOR38 HEPCGN_11425 ccmF Cytochrome c biogenesis protein CcmF insig. 29 91
  Escherichia coli BL21 ECD_03946 heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE insig. 30 91
  Escherichia coli BW25113 b4074 nrfE heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE (NCBI) insig. 30 91
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0800 Cytochrome c biogenesis factor no data 31 76
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1457 Cytochrome c heme lyase subunit CcmF insig. 30 93
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07885 cytochrome c biogenesis protein CcsA no data 29 73
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_18700 cytochrome C biogenesis protein no data 28 85
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS03500 cytochrome C biogenesis protein no data 27 85
  Herbaspirillum seropedicae SmR1 HSERO_RS00775 cytochrome C biogenesis protein no data 32 25
  Cupriavidus basilensis FW507-4G11 RR42_RS19080 cytochrome C biogenesis protein no data 27 48
  Paraburkholderia graminis OAS925 ABIE53_003752 cytochrome c-type biogenesis protein CcsB insig. 30 33
  Ralstonia sp. UNC404CL21Col ABZR87_RS02670 c-type cytochrome biogenesis protein CcsB no data 32 24
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05603 cytochrome c-type biogenesis protein CcsB no data 30 33
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS07020 c-type cytochrome biogenesis protein CcsB strong 32 24
  Ralstonia solanacearum PSI07 RPSI07_RS10220 c-type cytochrome biogenesis protein CcsB sig. 32 24
  Ralstonia solanacearum UW163 UW163_RS06595 c-type cytochrome biogenesis protein CcsB insig. 32 24
  Ralstonia solanacearum GMI1000 RS_RS14960 c-type cytochrome biogenesis protein CcsB no data 32 24
  Burkholderia phytofirmans PsJN BPHYT_RS17945 cytochrome C biogenesis protein cofit 29 33
  Methylophilus sp. DMC18 GFF1549 Cytochrome c biogenesis protein CcsA no data 32 25
  Paraburkholderia sabiae LMG 24235 QEN71_RS28095 c-type cytochrome biogenesis protein CcsB strong 29 33
  Cellulophaga baltica 18 M666_RS13540 cytochrome c biogenesis protein CcsA no data 28 32
  Bacteroides ovatus ATCC 8483 BACOVA_03806 putative cytochrome c-type biogenesis protein CcsB insig. 28 24
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS01450 cytochrome c biogenesis protein CcsA strong 25 39
  Mycobacterium tuberculosis H37Rv Rv0529 Possible cytochrome C-type biogenesis protein CcsA no data 29 19
  Synechocystis sp000284455 PCC 6803 SGL_RS04050 c-type cytochrome biogenesis protein CcsB no data 33 14
  Bacteroides thetaiotaomicron VPI-5482 BT4430 cytochrome c biogenesis protein (ccsA) (NCBI ptt file) insig. 28 25
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1349 Cytochrome c-type biogenesis protein CcsA/ResC no data 36 14
  Synechococcus elongatus PCC 7942 Synpcc7942_0511 ccsA ABC-type transport system involved in cytochrome c biogenesis permease component-like no data 33 14
  Acidovorax sp. GW101-3H11 Ac3H11_2975 Cytochrome c-type biogenesis protein CcsA/ResC no data 36 14
  Castellaniella sp019104865 MT123 ABCV34_RS12675 c-type cytochrome biogenesis protein CcsB no data 29 21
  Bacteroides thetaiotaomicron VPI-5482 BT1605 cytochrome c biogenesis protein (NCBI ptt file) insig. 27 27
  Variovorax sp. OAS795 ABID97_RS23320 c-type cytochrome biogenesis protein CcsB strong 44 9
  Variovorax sp. SCN45 GFF5312 Cytochrome c-type biogenesis protein CcsA/ResC no data 44 9
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0803 ABC-type transport system involved in cytochrome c biogenesis, permease component no data 35 22
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0876 ABC-type transport system involved in cytochrome c biogenesis, permease component insig. 31 18
  Bacteroides thetaiotaomicron VPI-5482 BT2474 cytochrome c biogenesis protein ccsA (NCBI ptt file) sig. 29 21