Homologs of SO1923 from Shewanella oneidensis MR-1

AcrB/AcrD/AcrF family protein (NCBI ptt file)
SEED: RND multidrug efflux transporter; Acriflavin resistance protein
KEGG: hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO1923 AcrB/AcrD/AcrF family protein (NCBI ptt file) insig. 100 100
o Shewanella sp. ANA-3 Shewana3_1702 acriflavin resistance protein (RefSeq) insig. 94 100
o Shewanella loihica PV-4 Shew_1647 acriflavin resistance protein (RefSeq) strong 77 100
o Shewanella amazonensis SB2B Sama_1419 AcrB/AcrD/AcrF family protein (RefSeq) insig. 73 100
o Alteromonas macleodii MIT1002 MIT1002_02303 Swarming motility protein SwrC insig. 53 98
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2442.1 Transport protein insig. 39 100
o Lysobacter sp. OAE881 ABIE51_RS09295 efflux RND transporter permease subunit insig. 39 98
  Bacteroides stercoris CC31F HMPREF1181_RS00320 efflux RND transporter permease subunit cofit 27 97
  Bacteroides thetaiotaomicron VPI-5482 BT2686 putative cation efflux transporter (NCBI ptt file) strong 26 97
  Cupriavidus basilensis FW507-4G11 RR42_RS15655 nodulation protein NolG insig. 27 97
  Bacteroides ovatus ATCC 8483 BACOVA_00987 heavy metal efflux pump, CzcA family insig. 25 97
  Azospirillum brasilense Sp245 AZOBR_RS14655 nodulation protein NolG strong 27 98
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00110 hydrophobic/amphiphilic exporter-1, HAE1 family insig. 27 96
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24180 acriflavin resistance protein strong 25 98
  Bacteroides thetaiotaomicron VPI-5482 BT0299 cation efflux system (AcrB/AcrD/AcrF family) (NCBI ptt file) insig. 26 98
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03175 acriflavin resistance protein cofit 25 98
  Fusobacterium nucleatum SB010 HUW76_07660 efflux RND transporter permease subunit cofit 27 97
  Azospirillum sp. SherDot2 MPMX19_00826 Multidrug resistance protein MdtB insig. 28 99
  Acidovorax sp. GW101-3H11 Ac3H11_2222 RND multidrug efflux transporter; Acriflavin resistance protein insig. 26 96
  Acinetobacter radioresistens SK82 MPMX26_02516 Multidrug resistance protein MdtC insig. 26 98
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS15700 efflux RND transporter permease subunit insig. 25 99
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2440.1 Transport protein insig. 26 100
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5762 RND multidrug efflux transporter; Acriflavin resistance protein insig. 27 96
  Sinorhizobium meliloti 1021 SMa0875 NolG efflux transporter insig. 26 97
  Phocaeicola dorei CL03T12C01 ABI39_RS01255 efflux RND transporter permease subunit cofit 25 97
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1551 Cation/multidrug efflux pump cofit 25 98
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02070 efflux RND transporter permease subunit cofit 25 97
  Rhodanobacter sp. FW510-T8 OKGIIK_11990 acrB acriflavine resistance protein B cofit 25 98
  Caulobacter crescentus NA1000 CCNA_03301 cation/multidrug efflux pump AcrB strong 26 97
  Caulobacter crescentus NA1000 Δfur CCNA_03301 cation/multidrug efflux pump AcrB cofit 26 97
  Fusobacterium nucleatum SB010 HUW76_03875 efflux RND transporter permease subunit strong 25 97
  Methylophilus sp. DMC18 GFF992 Multidrug resistance protein MdtC insig. 25 99
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11745 efflux RND transporter permease subunit insig. 25 98
  Enterobacter sp. TBS_079 MPMX20_03062 Multidrug resistance protein MdtC insig. 25 98
  Pseudomonas sp. S08-1 OH686_00930 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtC (RND type) cofit 26 98
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11905 efflux RND transporter permease subunit strong 25 98
  Marinobacter adhaerens HP15 HP15_3693 multidrug resistance protein insig. 25 98
  Serratia liquefaciens MT49 IAI46_18980 multidrug efflux RND transporter permease subunit MdtC insig. 24 98
  Ralstonia sp. UNC404CL21Col ABZR87_RS20905 efflux RND transporter permease subunit insig. 24 95
  Enterobacter asburiae PDN3 EX28DRAFT_0482 Cation/multidrug efflux pump insig. 25 98
  Rhodanobacter denitrificans MT42 LRK55_RS11630 efflux RND transporter permease subunit cofit 24 98
  Ralstonia solanacearum GMI1000 RS_RS22920 nodulation protein insig. 24 97
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS06485 efflux RND transporter permease subunit insig. 26 98
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4261 RND multidrug efflux transporter; Acriflavin resistance protein insig. 26 98
  Pseudomonas sp. DMC3 GFF3506 Multidrug resistance protein MdtC insig. 25 96
  Rhodopseudomonas palustris CGA009 TX73_024325 efflux RND transporter permease subunit insig. 26 97
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05470 efflux RND transporter permease subunit insig. 25 97
  Agrobacterium fabrum C58 Atu2054 AcrB/AcrD/AcrF family protein insig. 24 98
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS18115 nodulation protein insig. 24 97
  Ralstonia solanacearum UW163 UW163_RS21015 nodulation protein insig. 24 97
  Rhizobium sp. OAE497 ABIE40_RS11655 efflux RND transporter permease subunit insig. 24 100
  Agrobacterium fabrum C58 Atu4636 AcrB/AcrD/AcrF family protein insig. 26 100
  Shewanella sp. ANA-3 Shewana3_1659 acriflavin resistance protein (RefSeq) insig. 25 98
  Alteromonas macleodii MIT1002 MIT1002_01303 Efflux pump membrane transporter BepE insig. 24 98
  Shewanella oneidensis MR-1 SO1882 AcrB/AcrD/AcrF family protein (NCBI ptt file) insig. 25 98
  Shewanella amazonensis SB2B Sama_1905 AcrB/AcrD/AcrF family protein (RefSeq) strong 25 99
  Klebsiella michiganensis M5al BWI76_RS19260 multidrug transporter subunit MdtC insig. 25 98
  Ralstonia solanacearum PSI07 RPSI07_RS05520 nodulation protein insig. 24 97
  Ralstonia solanacearum PSI07 RPSI07_RS02515 AcrB/AcrD/AcrF family protein insig. 24 95
  Ralstonia sp. UNC404CL21Col ABZR87_RS19020 multidrug efflux RND transporter permease subunit strong 24 97
  Pseudomonas sp. S08-1 OH686_22670 RND efflux system, inner membrane transporter cofit 25 98
  Shewanella loihica PV-4 Shew_1852 acriflavin resistance protein (RefSeq) strong 25 98
  Acidovorax sp. GW101-3H11 Ac3H11_482 RND multidrug efflux transporter; Acriflavin resistance protein insig. 25 98
  Synechocystis sp000284455 PCC 6803 SGL_RS12200 efflux RND transporter permease subunit cofit 27 98
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF487 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA insig. 26 98
  Bacteroides stercoris CC31F HMPREF1181_RS09455 efflux RND transporter permease subunit insig. 25 98
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3265 Acriflavin resistance plasma membrane protein insig. 25 98
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0681 Cation/multidrug efflux pump cofit 24 97
  Desulfovibrio vulgaris Hildenborough JW710 DVU0438 AcrB/AcrD/AcrF family protein (TIGR) strong 24 99
  Phocaeicola dorei CL03T12C01 ABI39_RS09435 efflux RND transporter permease subunit insig. 25 98
  Bacteroides ovatus ATCC 8483 BACOVA_03090 RND transporter, HAE1 family insig. 25 98
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13825 efflux RND transporter permease subunit insig. 25 98
  Pseudomonas fluorescens FW300-N2E3 AO353_22900 acriflavine resistance protein B insig. 25 98
  Desulfovibrio vulgaris Miyazaki F DvMF_1515 acriflavin resistance protein (RefSeq) strong 24 98
  Escherichia coli BW25113 b2076 mdtC multidrug efflux system, subunit C (NCBI) sig. 25 98
  Bacteroides thetaiotaomicron VPI-5482 BT2252 multidrug efflux membrane fusion protein (NCBI ptt file) insig. 26 98
  Escherichia coli BL21 ECD_01981 multidrug efflux system, subunit C insig. 25 98
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01628 Multidrug resistance protein MdtC insig. 25 98
  Ralstonia solanacearum GMI1000 RS_RS20330 AcrB/AcrD/AcrF family protein insig. 24 95
  Escherichia coli ECRC100 OKFHMN_24190 mdtC multidrug efflux RND transporter permease subunit MdtC cofit 25 97
  Escherichia coli ECRC101 MCAODC_20750 mdtC multidrug efflux RND transporter permease subunit MdtC insig. 25 97
  Escherichia coli ECRC102 NIAGMN_22135 mdtC multidrug efflux RND transporter permease subunit MdtC insig. 25 97
  Escherichia coli ECRC98 JDDGAC_28300 mdtC multidrug efflux RND transporter permease subunit MdtC insig. 25 97
  Escherichia coli ECRC99 KEDOAH_03960 mdtC multidrug efflux RND transporter permease subunit MdtC no data 25 97
  Escherichia coli ECRC62 BNILDI_14450 mdtC multidrug efflux RND transporter permease subunit MdtC cofit 25 97
  Methylophilus sp. DMC18 GFF2200 Multidrug resistance protein MdtC insig. 25 97
  Escherichia coli Nissle 1917 ECOLIN_RS12205 multidrug efflux RND transporter permease subunit MdtC no data 25 98
  Escherichia fergusonii Becca EFB2_01779 Multidrug resistance protein MdtC insig. 25 98
  Escherichia coli ECOR27 NOLOHH_15535 mdtC multidrug efflux RND transporter permease subunit MdtC cofit 25 97
  Lysobacter sp. OAE881 ABIE51_RS16985 efflux RND transporter permease subunit insig. 26 98
  Escherichia coli ECOR38 HEPCGN_02880 mdtC multidrug efflux RND transporter permease subunit MdtC insig. 25 97
  Dickeya dianthicola 67-19 HGI48_RS15350 multidrug efflux RND transporter permease subunit MdtC insig. 25 98
  Xanthobacter sp. DMC5 GFF2940 Multidrug resistance protein MdtC insig. 26 97
  Azospirillum sp. SherDot2 MPMX19_01439 Multidrug resistance protein MdtC insig. 26 97
  Pectobacterium carotovorum WPP14 HER17_RS06315 multidrug efflux RND transporter permease subunit MdtC cofit 24 98
  Pseudomonas sp. SVBP6 COO64_RS14570 efflux RND transporter permease subunit insig. 25 98
  Dickeya dianthicola ME23 DZA65_RS16170 multidrug efflux RND transporter permease subunit MdtC cofit 25 98
  Sinorhizobium meliloti 1021 SMc01457 transport transmembrane protein strong 24 97
  Azospirillum brasilense Sp245 AZOBR_RS14670 multidrug transporter insig. 25 97
  Pseudomonas fluorescens SBW25 PFLU_RS19220 efflux RND transporter permease subunit insig. 25 98