Homologs of Rru_A2659 from Rhodospirillum rubrum S1H

Pseudouridine synthase, RluD (NCBI)
SEED: Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase C

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodospirillum rubrum S1H Rru_A2659 Pseudouridine synthase, RluD (NCBI) no data 100 100
o Azospirillum brasilense Sp245 AZOBR_RS06905 pseudouridine synthase strong 54 98
o Azospirillum sp. SherDot2 MPMX19_01718 Ribosomal large subunit pseudouridine synthase C insig. 53 99
o Magnetospirillum magneticum AMB-1 AMB_RS15620 RluA family pseudouridine synthase cofit 53 99
o Agrobacterium fabrum C58 Atu1471 ribosomal large subunit pseudouridine synthase C no data 50 96
o Rhizobium sp. OAE497 ABIE40_RS09915 RluA family pseudouridine synthase sig. 49 96
o Sinorhizobium meliloti 1021 SMc01275 ribosomal large subunit pseudouridine synthase C protein strong 50 95
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1033 pseudouridine synthase, RluA family no data 48 97
  Sphingobium sp. HT1-2 GFF3074 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) cofit 46 98
o Xanthobacter sp. DMC5 GFF1347 Ribosomal large subunit pseudouridine synthase C insig. 45 96
o Phaeobacter inhibens DSM 17395 PGA1_c01950 ribosomal large subunit pseudouridine synthase C no data 45 97
o Caulobacter crescentus NA1000 CCNA_02059 ribosomal large subunit pseudouridine synthase C strong 46 98
o Caulobacter crescentus NA1000 Δfur CCNA_02059 ribosomal large subunit pseudouridine synthase C cofit 46 98
  Rhodopseudomonas palustris CGA009 TX73_016595 RluA family pseudouridine synthase insig. 45 95
o Dinoroseobacter shibae DFL-12 Dshi_0315 pseudouridine synthase, RluA family (RefSeq) insig. 47 98
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07865 RluA family pseudouridine synthase cofit 45 98
  Bosea sp. OAE506 ABIE41_RS14710 RluA family pseudouridine synthase insig. 46 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_459 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) no data 37 95
o Pseudomonas stutzeri RCH2 Psest_1680 pseudouridine synthase, RluA family no data 38 95
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2097 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) strong 37 94
o Pseudomonas fluorescens SBW25 PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 37 95
o Pseudomonas fluorescens SBW25-INTG PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 37 95
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04440 Ribosomal large subunit pseudouridine synthase C cofit 37 95
o Pseudomonas putida KT2440 PP_1906 ribosomal large subunit pseudouridine synthase C strong 39 91
o Pseudomonas sp. BP01 JOY50_RS16830 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 39 91
o Pseudomonas aeruginosa PA14 IKLFDK_15135 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 38 95
o Pseudomonas aeruginosa PUPa3 DQ20_RS33485 rluC;go_function=RNA 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 38 95
o Pseudomonas simiae WCS417 PS417_21480 23S rRNA pseudouridylate synthase strong 37 95
o Pseudomonas aeruginosa MRSN321 DY961_RS02100 rluC;go_function=RNA 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 38 95
o Erwinia tracheiphila SCR3 LU632_RS14855 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 38 91
o Pseudomonas fluorescens FW300-N2E3 AO353_01405 23S rRNA pseudouridylate synthase strong 37 95
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_00715 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 38 91
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5944 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) strong 37 95
o Pseudomonas fluorescens FW300-N2C3 AO356_20125 23S rRNA pseudouridylate synthase strong 37 95
o Erwinia amylovora T8 OLJFJH_15565 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 37 95
o Pseudomonas orientalis W4I3 QF045_RS23560 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 36 95
o Pseudomonas sp. SVBP6 COO64_RS05845 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 37 95
o Shewanella sp. ANA-3 Shewana3_2566 ribosomal large subunit pseudouridine synthase C (RefSeq) sig. 35 96
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3366 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) cofit 37 95
o Pseudomonas sp. DMC3 GFF4765 Ribosomal large subunit pseudouridine synthase C cofit 36 94
o Escherichia coli Nissle 1917 ECOLIN_RS06280 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 37 91
o Pseudomonas syringae pv. syringae B728a Psyr_1639 ribosomal large subunit pseudouridine synthase C sig. 36 95
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1639 ribosomal large subunit pseudouridine synthase C insig. 36 95
o Pseudomonas sp. RS175 PFR28_03018 Ribosomal large subunit pseudouridine synthase C sig. 37 91
o Klebsiella michiganensis M5al BWI76_RS11050 23S rRNA pseudouridine(955/2504/2580) synthase strong 36 95
o Pseudomonas sp. S08-1 OH686_22095 LSU rRNA pseudouridine(955/2504/2580) synthase cofit 37 95
o Rahnella sp. WP5 EX31_RS24400 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 36 95
o Escherichia coli BL21 ECD_01082 23S rRNA pseudouridine(955,2504,2580) synthase strong 37 91
o Escherichia fergusonii Becca EFB2_02889 Ribosomal large subunit pseudouridine synthase C insig. 37 91
o Escherichia coli ECOR27 NOLOHH_21145 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 37 91
o Escherichia coli ECOR38 HEPCGN_23865 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 37 91
o Escherichia coli ECRC100 OKFHMN_03615 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 37 91
o Escherichia coli ECRC101 MCAODC_22975 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 37 91
o Escherichia coli ECRC102 NIAGMN_24215 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 37 91
o Escherichia coli ECRC62 BNILDI_19305 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 37 91
o Escherichia coli ECRC98 JDDGAC_07275 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 37 91
o Escherichia coli ECRC99 KEDOAH_24140 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC no data 37 91
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02580 Ribosomal large subunit pseudouridine synthase C strong 37 91
o Escherichia coli BW25113 b1086 rluC 23S rRNA pseudouridylate synthase (NCBI) strong 37 91
o Pseudomonas segetis P6 ACVTMO_RS10270 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 37 91
o Shewanella amazonensis SB2B Sama_1988 pseudouridylate synthase (RefSeq) strong 35 91
o Alteromonas macleodii MIT1002 MIT1002_01725 Ribosomal large subunit pseudouridine synthase C insig. 37 88
o Kangiella aquimarina DSM 16071 B158DRAFT_1770 ribosomal large subunit pseudouridine synthase C (EC 5.4.99.24) insig. 35 95
o Klebsiella pneumoniae MKP103 KDGMDA_18660 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 36 95
o Enterobacter asburiae PDN3 EX28DRAFT_1844 pseudouridine synthase, RluA family insig. 36 95
o Klebsiella pneumoniae MRSN742743 KFA93_RS00230 rluC;go_function=RNA 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 36 95
  Synechocystis sp000284455 PCC 6803 SGL_RS11530 RluA family pseudouridine synthase strong 36 91
  Vibrio cholerae E7946 ATCC 55056 CSW01_10130 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 34 95
  Caulobacter crescentus NA1000 CCNA_01343 ribosomal large subunit pseudouridine synthase C sig. 43 72
  Caulobacter crescentus NA1000 Δfur CCNA_01343 ribosomal large subunit pseudouridine synthase C cofit 43 72
  Enterobacter sp. TBS_079 MPMX20_01766 Ribosomal large subunit pseudouridine synthase C sig. 36 93
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14375 RluA family pseudouridine synthase strong 37 92
  Ralstonia solanacearum UW163 UW163_RS11840 RluA family pseudouridine synthase insig. 37 92
  Magnetospirillum magneticum AMB-1 AMB_RS19265 RNA pseudouridine synthase cofit 41 67
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS02725 RluA family pseudouridine synthase sig. 41 78
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS05230 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 36 91
  Acinetobacter radioresistens SK82 MPMX26_00317 Ribosomal large subunit pseudouridine synthase C insig. 35 94
  Acinetobacter baumannii LAC-4 RR41_RS16980 RluA family pseudouridine synthase sig. 33 95
  Pantoea sp. MT58 IAI47_12105 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 35 94
  Ralstonia sp. UNC404CL21Col ABZR87_RS10090 RluA family pseudouridine synthase sig. 36 100
  Azospirillum sp. SherDot2 MPMX19_03163 hypothetical protein insig. 41 67
  Shewanella loihica PV-4 Shew_1594 RluA family pseudouridine synthase (RefSeq) sig. 34 91
  Acidovorax sp. GW101-3H11 Ac3H11_1590 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) strong 34 93
  Ralstonia solanacearum GMI1000 RS_RS05155 RluA family pseudouridine synthase strong 37 92
  Pectobacterium carotovorum WPP14 HER17_RS08615 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 34 95
  Rhodanobacter denitrificans MT42 LRK55_RS17750 RluA family pseudouridine synthase strong 36 94
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS17895 RluA family pseudouridine synthase strong 36 94
  Rhodanobacter sp. FW510-T8 OKGIIK_07405 rluA 23S rRNA pseudouridine(955/2504/2580) synthase sig. 36 94
  Cupriavidus basilensis FW507-4G11 RR42_RS14155 pseudouridine synthase strong 36 92
  Marinobacter adhaerens HP15 HP15_2221 pseudouridine synthase, RluA family sig. 33 94
  Ralstonia solanacearum PSI07 RPSI07_RS19085 RluA family pseudouridine synthase strong 37 92
  Dechlorosoma suillum PS Dsui_2437 pseudouridine synthase, RluA family strong 34 95
  Azospirillum brasilense Sp245 AZOBR_RS08300 pseudouridine synthase insig. 41 68
  Burkholderia phytofirmans PsJN BPHYT_RS14480 ribosomal large subunit pseudouridine synthase C sig. 35 95
  Castellaniella sp019104865 MT123 ABCV34_RS08415 RluA family pseudouridine synthase sig. 37 94
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS11465 RluA family pseudouridine synthase no data 38 85
  Rhodospirillum rubrum S1H Rru_A1111 Pseudouridine synthase, RluD (NCBI) strong 36 90
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04340 23S rRNA pseudouridine955/2504/2580 synthase insig. 35 95
  Dickeya dianthicola 67-19 HGI48_RS13220 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 36 95
  Dickeya dianthicola ME23 DZA65_RS13690 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 36 95
  Serratia liquefaciens MT49 IAI46_09755 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 35 95
  Magnetospirillum magneticum AMB-1 AMB_RS16095 RluA family pseudouridine synthase insig. 35 87
  Paraburkholderia graminis OAS925 ABIE53_003058 23S rRNA pseudouridine955/2504/2580 synthase sig. 34 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS04500 RluA family pseudouridine synthase cofit 34 98
  Lysobacter sp. OAE881 ABIE51_RS11800 RluA family pseudouridine synthase cofit 35 92
  Variovorax sp. SCN45 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) insig. 34 89
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07880 RluA family pseudouridine synthase insig. 38 72
  Variovorax sp. OAS795 ABID97_RS08250 RluA family pseudouridine synthase strong 34 94
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2616.1 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) sig. 33 95
  Dickeya dadantii 3937 DDA3937_RS13155 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 36 91
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10060 RluA family pseudouridine synthase insig. 34 92
  Magnetospirillum magneticum AMB-1 AMB_RS17255 RNA pseudouridine synthase insig. 40 68
  Sphingobium sp. HT1-2 GFF4062 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) cofit 33 88
  Lysobacter sp. OAE881 ABIE51_RS04885 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 34 91
  Herbaspirillum seropedicae SmR1 HSERO_RS09415 ribosomal large subunit pseudouridine synthase C strong 33 88
  Rhodanobacter denitrificans MT42 LRK55_RS04745 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 35 85
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS04965 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 35 85
  Azospirillum brasilense Sp245 AZOBR_RS31090 pseudouridine synthase insig. 40 68
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF121 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) cofit 32 93
  Desulfovibrio vulgaris Hildenborough JW710 DVU3191 rluC ribosomal large subunit pseudouridine synthase C (TIGR) sig. 34 91
  Synechococcus elongatus PCC 7942 Synpcc7942_1112 ribosomal large subunit pseudouridine synthase D strong 34 90
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS05045 23S rRNA pseudouridine(1911/1915/1917) synthase RluD insig. 34 85
  Rhodanobacter sp. FW510-T8 OKGIIK_01790 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 34 85
  Azospirillum sp. SherDot2 MPMX19_05442 Ribosomal large subunit pseudouridine synthase D strong 34 87
  Rhizobium sp. OAE497 ABIE40_RS14790 RluA family pseudouridine synthase sig. 33 93
  Pseudomonas putida KT2440 PP_0623 23S rRNA pseudouridine(1911,1915,1917) synthase no data 34 91
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS10965 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 32 95
  Xanthobacter sp. DMC5 GFF3765 hypothetical protein insig. 40 67
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0642 pseudouridine synthase, RluA family strong 29 87
  Azospirillum sp. SherDot2 MPMX19_05341 hypothetical protein insig. 35 77
  Caulobacter crescentus NA1000 CCNA_00485 ribosomal large subunit pseudouridine synthase D strong 34 93
  Caulobacter crescentus NA1000 Δfur CCNA_00485 ribosomal large subunit pseudouridine synthase D cofit 34 93
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS12935 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 40 60
  Pantoea sp. MT58 IAI47_16060 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 40 60
  Fusobacterium nucleatum SB010 HUW76_08575 RluA family pseudouridine synthase strong 29 94
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF184 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) cofit 42 61
  Erwinia amylovora T8 OLJFJH_10525 RNA pseudouridine synthase insig. 41 60
  Burkholderia phytofirmans PsJN BPHYT_RS09135 ribosomal large subunit pseudouridine synthase D sig. 33 96
  Dickeya dadantii 3937 DDA3937_RS16110 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 31 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS22215 RluA family pseudouridine synthase no data 33 94
  Pectobacterium carotovorum WPP14 HER17_RS02985 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 42 60
  Erwinia tracheiphila SCR3 LU632_RS02800 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA no data 41 60
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS01385 RluA family pseudouridine synthase insig. 38 63
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0664 pseudouridine synthase, RluA family strong 36 84
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00848 ribosomal large subunit pseudouridine synthase D (EC 5.4.99.-) insig. 33 95
  Paraburkholderia graminis OAS925 ABIE53_002062 23S rRNA pseudouridine1911/1915/1917 synthase strong 33 96
  Bosea sp. OAE506 ABIE41_RS05635 RluA family pseudouridine synthase sig. 31 91
  Variovorax sp. OAS795 ABID97_RS14190 RluA family pseudouridine synthase strong 34 95
  Pantoea sp. MT58 IAI47_07280 RluA family pseudouridine synthase insig. 40 63
  Klebsiella michiganensis M5al BWI76_RS04565 bifunctional tRNA pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase RluA sig. 41 60
  Methylophilus sp. DMC18 GFF1177 Ribosomal large subunit pseudouridine synthase C insig. 31 91
  Escherichia coli BL21 ECD_00060 dual specificity 23S rRNA pseudouridine(746), tRNA pseudouridine(32) synthase, SAM-dependent cofit 41 61
  Escherichia coli ECOR27 NOLOHH_03150 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 41 61
  Escherichia coli ECOR38 HEPCGN_08795 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 41 61
  Escherichia coli ECRC62 BNILDI_08455 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 41 61
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03600 Ribosomal large subunit pseudouridine synthase A insig. 41 61
  Escherichia coli BW25113 b0058 rluA pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32) (NCBI) sig. 41 61
  Sinorhizobium meliloti 1021 SMc00647 ribosomal large subunit pseudouridine synthase strong 32 93
  Pseudomonas sp. BP01 JOY50_RS27130 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 32 91
  Escherichia coli Nissle 1917 ECOLIN_RS00310 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 41 60
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_06080 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 41 60
  Escherichia fergusonii Becca EFB2_03987 Dual-specificity RNA pseudouridine synthase RluA insig. 41 61
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1362.1 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) sig. 32 96
  Variovorax sp. SCN45 GFF988 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) cofit 32 95
  Enterobacter asburiae PDN3 EX28DRAFT_3650 pseudouridine synthase, RluA family insig. 40 61
  Dickeya dianthicola 67-19 HGI48_RS16235 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 30 94
  Dickeya dianthicola ME23 DZA65_RS17330 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 30 94
  Cellulophaga baltica 18 M666_RS09010 RluA family pseudouridine synthase sig. 30 87
  Klebsiella michiganensis M5al BWI76_RS17615 RNA pseudouridine synthase insig. 40 60
  Bosea sp. OAE506 ABIE41_RS04835 RNA pseudouridine synthase insig. 39 65
  Ralstonia sp. UNC404CL21Col ABZR87_RS13315 RluA family pseudouridine synthase strong 34 85
  Ralstonia solanacearum PSI07 RPSI07_RS15970 RluA family pseudouridine synthase insig. 34 88
  Serratia liquefaciens MT49 IAI46_03985 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 30 94
  Erwinia amylovora T8 OLJFJH_01345 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 40 59
  Klebsiella pneumoniae MKP103 KDGMDA_24890 RNA pseudouridine synthase insig. 40 60
  Shewanella loihica PV-4 Shew_2950 RluA family pseudouridine synthase (RefSeq) strong 31 95
  Pseudomonas sp. BP01 JOY50_RS16355 RluA family pseudouridine synthase insig. 40 60
  Shewanella loihica PV-4 Shew_0783 pseudouridylate synthase (RefSeq) no data 37 63
  Klebsiella pneumoniae MRSN742743 KFA93_RS08185 RluA family pseudouridine synthase insig. 39 60
  Pseudomonas aeruginosa MRSN321 DY961_RS23730 rluD;go_function=RNA 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 32 91
  Pseudomonas aeruginosa PA14 IKLFDK_00810 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 32 91
  Pseudomonas aeruginosa PUPa3 DQ20_RS56195 rluD;go_function=RNA 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 32 91
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4870 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) sig. 33 97
  Dickeya dianthicola 67-19 HGI48_RS18175 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 40 60
  Dickeya dianthicola ME23 DZA65_RS19315 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 40 60
  Escherichia coli ECRC100 OKFHMN_10805 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 40 61
  Escherichia coli ECRC101 MCAODC_01320 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 40 61
  Escherichia coli ECRC102 NIAGMN_08655 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 40 61
  Escherichia coli ECRC98 JDDGAC_14400 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 40 61
  Escherichia coli ECRC99 KEDOAH_17350 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA no data 40 61
  Klebsiella pneumoniae MKP103 KDGMDA_12790 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 40 61
  Enterobacter sp. TBS_079 MPMX20_00752 Dual-specificity RNA pseudouridine synthase RluA insig. 39 61
  Phocaeicola dorei CL03T12C01 ABI39_RS02845 RluA family pseudouridine synthase strong 30 92
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_15205 RNA pseudouridine synthase strong 31 84
  Bacteroides thetaiotaomicron VPI-5482 BT3712 ribosomal large subunit pseudouridine synthase D (NCBI ptt file) strong 31 88
  Pseudomonas segetis P6 ACVTMO_RS15920 RluA family pseudouridine synthase insig. 41 60
  Klebsiella pneumoniae MRSN742743 KFA93_RS11260 rluA;go_function=RNA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 40 61
  Pseudomonas fluorescens FW300-N2C3 AO356_19405 pseudouridine synthase insig. 38 60
  Herbaspirillum seropedicae SmR1 HSERO_RS15070 ribosomal large subunit pseudouridine synthase D insig. 33 79
  Acidovorax sp. GW101-3H11 Ac3H11_1787 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) sig. 32 93
  Escherichia coli ECRC100 OKFHMN_21250 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 30 94
  Escherichia coli ECRC101 MCAODC_11780 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 30 94
  Escherichia coli ECRC102 NIAGMN_19020 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 30 94
  Escherichia coli ECRC98 JDDGAC_24915 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 30 94
  Escherichia coli ECRC99 KEDOAH_06970 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD no data 30 94
  Erwinia amylovora T8 OLJFJH_09725 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 30 93
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08615 RluA family pseudouridine synthase strong 30 92
  Pseudomonas putida KT2440 PP_1731 23S rRNA (746) and tRNA (32) pseudouridine synthase sig. 39 63
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS01520 RluA family pseudouridine synthase insig. 32 88
  Ralstonia solanacearum UW163 UW163_RS14830 RluA family pseudouridine synthase insig. 32 88
  Escherichia fergusonii Becca EFB2_01296 Ribosomal large subunit pseudouridine synthase D sig. 30 94
  Escherichia coli ECOR27 NOLOHH_12925 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 30 94
  Escherichia coli ECOR38 HEPCGN_20375 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 30 94
  Escherichia coli ECRC62 BNILDI_11730 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 30 94
  Escherichia coli Nissle 1917 ECOLIN_RS14675 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 30 94
  Bacteroides stercoris CC31F HMPREF1181_RS03250 RluA family pseudouridine synthase strong 30 88
  Serratia liquefaciens MT49 IAI46_03270 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 40 60
  Dechlorosoma suillum PS Dsui_2530 pseudouridine synthase, RluA family sig. 31 93
  Escherichia coli BL21 ECD_02484 23S rRNA pseudouridine(1911,1915,1917) synthase strong 30 94
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01112 Ribosomal large subunit pseudouridine synthase D sig. 30 94
  Escherichia coli BW25113 b2594 rluD 23S rRNA pseudouridine synthase (NCBI) no data 30 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5794 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) strong 38 60
  Pseudomonas sp. SVBP6 COO64_RS06925 RluA family pseudouridine synthase insig. 39 60
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00969 Ribosomal large subunit pseudouridine synthase D cofit 32 91
  Pseudomonas sp. S08-1 OH686_19760 LSU rRNA pseudouridine(746) synthase or tRNA pseudouridine(32) synthase insig. 40 60
  Pseudomonas sp. SVBP6 COO64_RS11055 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 33 91
  Pectobacterium carotovorum WPP14 HER17_RS05400 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 30 94
  Serratia liquefaciens MT49 IAI46_20985 RluA family pseudouridine synthase insig. 39 60
  Pseudomonas sp. RS175 PFR28_03154 Dual-specificity RNA pseudouridine synthase RluA insig. 38 60
  Pseudomonas sp. S08-1 OH686_16410 LSU rRNA pseudouridine(1911/1915/1917) synthase cofit 32 94
  Pseudomonas syringae pv. syringae B728a Psyr_0726 ribosomal large subunit pseudouridine synthase D strong 32 91
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0726 ribosomal large subunit pseudouridine synthase D strong 32 91
  Pseudomonas fluorescens FW300-N2E3 AO353_02385 pseudouridine synthase no data 38 60
  Bacteroides ovatus ATCC 8483 BACOVA_03528 pseudouridine synthase, RluA family strong 31 88
  Phaeobacter inhibens DSM 17395 PGA1_c33080 ribosomal large subunit pseudouridine synthase A sig. 43 60
  Dinoroseobacter shibae DFL-12 Dshi_3106 pseudouridine synthase (RefSeq) insig. 40 63
  Enterobacter sp. TBS_079 MPMX20_02187 Dual-specificity RNA pseudouridine synthase RluA insig. 40 60
  Rahnella sp. WP5 EX31_RS03750 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 38 59
  Cupriavidus basilensis FW507-4G11 RR42_RS07590 pseudouridine synthase strong 31 95
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14415 pseudouridine synthase strong 28 91
  Pseudomonas fluorescens FW300-N2E3 AO353_14220 ribosomal large subunit pseudouridine synthase D strong 32 91
  Alteromonas macleodii MIT1002 MIT1002_02679 Ribosomal large subunit pseudouridine synthase D cofit 32 94
  Dickeya dadantii 3937 DDA3937_RS18240 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 40 60
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2822 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) no data 32 91
  Rahnella sp. WP5 EX31_RS07570 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 30 94
  Pseudomonas syringae pv. syringae B728a Psyr_1610 ribosomal large subunit pseudouridine synthase A insig. 38 62
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1610 ribosomal large subunit pseudouridine synthase A insig. 38 62
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4194 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) insig. 38 60
  Pseudomonas fluorescens SBW25 PFLU_RS03870 23S rRNA pseudouridine(1911/1915/1917) synthase RluD insig. 32 85
  Pseudomonas fluorescens SBW25-INTG PFLU_RS03870 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 32 85