Conservation of cofitness between Xcc-8004.2326.1 and Xcc-8004.4398.1 in Xanthomonas campestris pv. campestris strain 8004

98 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.2326.1 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 1.0 Xcc-8004.4398.1 Serine hydroxymethyltransferase (EC 2.1.2.1) 0.70 7
Rhodanobacter denitrificans MT42 0.59 LRK55_RS02130 glutamate 5-kinase 0.84 LRK55_RS04400 serine hydroxymethyltransferase low > 63
Rhodanobacter denitrificans FW104-10B01 0.59 LRK54_RS02375 glutamate 5-kinase 0.84 LRK54_RS04625 serine hydroxymethyltransferase 0.51 55
Rhodanobacter sp. FW510-T8 0.57 OKGIIK_09420 proB glutamate 5-kinase 0.83 OKGIIK_11440 glyA serine hydroxymethyltransferase low > 52
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS08685 glutamate 5-kinase 0.84 ABZR86_RS10715 serine hydroxymethyltransferase 0.85 39
Lysobacter sp. OAE881 0.53 ABIE51_RS13370 glutamate 5-kinase 0.86 ABIE51_RS04620 serine hydroxymethyltransferase low > 62
Alteromonas macleodii MIT1002 0.42 MIT1002_04056 Glutamate 5-kinase 0.70 MIT1002_02702 Serine hydroxymethyltransferase low > 70
Shewanella amazonensis SB2B 0.38 Sama_2516 gamma-glutamyl kinase (RefSeq) 0.75 Sama_1014 glyA serine hydroxymethyltransferase (RefSeq) 0.89 47
Ralstonia solanacearum UW163 0.37 UW163_RS07480 glutamate 5-kinase 0.66 UW163_RS00670 serine hydroxymethyltransferase — —
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS06145 glutamate 5-kinase 0.66 RALBFv3_RS12895 serine hydroxymethyltransferase — —
Shewanella loihica PV-4 0.36 Shew_2848 gamma-glutamyl kinase (RefSeq) 0.75 Shew_1185 glyA serine hydroxymethyltransferase (RefSeq) 0.93 38
Serratia liquefaciens MT49 0.36 IAI46_04430 glutamate 5-kinase 0.71 IAI46_19395 serine hydroxymethyltransferase — —
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS01810 glutamate 5-kinase 0.67 ABZR87_RS08955 serine hydroxymethyltransferase — —
Rahnella sp. WP5 0.36 EX31_RS20980 glutamate 5-kinase 0.72 EX31_RS20585 serine hydroxymethyltransferase — —
Ralstonia solanacearum PSI07 0.36 RPSI07_RS11095 glutamate 5-kinase 0.65 RPSI07_RS20330 serine hydroxymethyltransferase 0.58 41
Shewanella sp. ANA-3 0.36 Shewana3_0954 gamma-glutamyl kinase (RefSeq) 0.75 Shewana3_1094 glyA serine hydroxymethyltransferase (RefSeq) 0.92 34
Ralstonia solanacearum GMI1000 0.36 RS_RS14095 glutamate 5-kinase 0.66 RS_RS03670 serine hydroxymethyltransferase — —
Escherichia coli ECRC102 0.36 NIAGMN_07535 proB Glutamate 5-kinase 0.70 NIAGMN_19280 glyA serine hydroxymethyltransferase — —
Klebsiella michiganensis M5al 0.36 BWI76_RS05840 glutamate 5-kinase 0.70 BWI76_RS21225 serine hydroxymethyltransferase — —
Escherichia coli Nissle 1917 0.36 ECOLIN_RS01825 glutamate 5-kinase 0.70 ECOLIN_RS14440 serine hydroxymethyltransferase — —
Escherichia coli ECRC62 0.36 BNILDI_00245 proB Glutamate 5-kinase 0.70 BNILDI_11985 glyA serine hydroxymethyltransferase low > 75
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS17940 gamma-glutamyl kinase 0.66 RR42_RS15485 serine hydroxymethyltransferase — —
Escherichia coli BW25113 0.36 b0242 proB gamma-glutamyl kinase (NCBI) 0.70 b2551 glyA serine hydroxymethyltransferase (NCBI) — —
Escherichia coli ECRC101 0.36 MCAODC_00195 proB Glutamate 5-kinase 0.70 MCAODC_12040 glyA serine hydroxymethyltransferase low > 87
Escherichia coli ECRC98 0.36 JDDGAC_13300 proB Glutamate 5-kinase 0.70 JDDGAC_25175 glyA serine hydroxymethyltransferase — —
Escherichia coli ECRC100 0.36 OKFHMN_09675 proB Glutamate 5-kinase 0.70 OKFHMN_21510 glyA serine hydroxymethyltransferase 0.93 44
Shewanella oneidensis MR-1 0.36 SO1121 proB glutamate 5-kinase (NCBI ptt file) 0.74 SO3471 glyA serine hydroxymethyltransferase (NCBI ptt file) 0.94 38
Castellaniella sp019104865 MT123 0.36 ABCV34_RS10800 glutamate 5-kinase 0.69 ABCV34_RS06400 serine hydroxymethyltransferase low > 48
Escherichia coli ECOR27 0.36 NOLOHH_02050 proB Glutamate 5-kinase 0.70 NOLOHH_13185 glyA serine hydroxymethyltransferase 0.92 46
Escherichia fergusonii Becca 0.36 EFB2_03778 Glutamate 5-kinase 0.70 EFB2_01345 Serine hydroxymethyltransferase — —
Escherichia coli BL21 0.36 ECD_00239 gamma-glutamate kinase 0.70 ECD_02443 serine hydroxymethyltransferase 0.74 47
Escherichia coli ECOR38 0.36 HEPCGN_07780 proB Glutamate 5-kinase 0.70 HEPCGN_20655 glyA serine hydroxymethyltransferase 0.91 51
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_03398 Glutamate 5-kinase 0.70 OHPLBJKB_01156 Serine hydroxymethyltransferase low > 73
Escherichia coli ECRC99 0.36 KEDOAH_18480 proB Glutamate 5-kinase 0.70 KEDOAH_06710 glyA serine hydroxymethyltransferase — —
Magnetospirillum magneticum AMB-1 0.35 AMB_RS20630 glutamate 5-kinase 0.58 AMB_RS11815 serine hydroxymethyltransferase — —
Enterobacter asburiae PDN3 0.35 EX28DRAFT_2651 glutamate 5-kinase 0.70 EX28DRAFT_0099 Glycine/serine hydroxymethyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF4114 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.70 GFF2447 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Enterobacter sp. TBS_079 0.35 MPMX20_00927 Glutamate 5-kinase 0.69 MPMX20_03420 Serine hydroxymethyltransferase — —
Pantoea sp. MT58 0.35 IAI47_15120 glutamate 5-kinase 0.73 IAI47_04960 serine hydroxymethyltransferase — —
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_2800 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.76 Pf1N1B4_2778 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Erwinia tracheiphila SCR3 0.35 LU632_RS01185 proB glutamate 5-kinase 0.71 LU632_RS17915 serine hydroxymethyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS25360 glutamate 5-kinase 0.76 PFLU_RS26195 serine hydroxymethyltransferase — —
Pseudomonas fluorescens SBW25 0.35 PFLU_RS25360 glutamate 5-kinase 0.76 PFLU_RS26195 serine hydroxymethyltransferase — —
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS27270 glutamate 5-kinase 0.69 QEN71_RS33600 serine hydroxymethyltransferase low > 153
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS17110 glutamate 5-kinase 0.65 BPHYT_RS03725 serine hydroxymethyltransferase — —
Pseudomonas simiae WCS417 0.34 PS417_23545 gamma-glutamyl kinase 0.76 PS417_24280 serine hydroxymethyltransferase — —
Azospirillum brasilense Sp245 0.34 AZOBR_RS04095 glutamate 5-kinase 0.57 AZOBR_RS10015 serine hydroxymethyltransferase — —
Variovorax sp. OAS795 0.34 ABID97_RS23400 glutamate 5-kinase 0.66 ABID97_RS17890 serine hydroxymethyltransferase — —
Synechococcus elongatus PCC 7942 0.34 Synpcc7942_2197 proB gamma-glutamyl kinase 0.60 Synpcc7942_0282 glyA serine hydroxymethyltransferase — —
Paraburkholderia graminis OAS925 0.34 ABIE53_003588 glutamate 5-kinase 0.65 ABIE53_000888 glycine hydroxymethyltransferase — —
Pseudomonas putida KT2440 0.34 PP_0691 Glutamate 5-kinase 0.76 PP_0671 serine hydroxymethyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_06264 glutamate 5-kinase 0.65 H281DRAFT_04726 serine hydroxymethyltransferase — —
Dickeya dadantii 3937 0.34 DDA3937_RS16535 glutamate 5-kinase 0.72 DDA3937_RS15600 serine hydroxymethyltransferase — —
Acidovorax sp. GW101-3H11 0.34 Ac3H11_4771 Glutamate 5-kinase (EC 2.7.2.11) 0.66 Ac3H11_2921 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Dickeya dianthicola 67-19 0.34 HGI48_RS16605 glutamate 5-kinase 0.72 HGI48_RS15700 serine hydroxymethyltransferase — —
Dickeya dianthicola ME23 0.33 DZA65_RS17695 glutamate 5-kinase 0.72 DZA65_RS16775 serine hydroxymethyltransferase — —
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS01815 gamma-glutamyl kinase 0.66 HSERO_RS06140 serine hydroxymethyltransferase — —
Pseudomonas sp. RS175 0.33 PFR28_03769 Glutamate 5-kinase 0.75 PFR28_03786 Serine hydroxymethyltransferase — —
Dechlorosoma suillum PS 0.33 Dsui_0166 glutamate 5-kinase 0.66 Dsui_1265 glycine/serine hydroxymethyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_15815 gamma-glutamyl kinase 0.75 AO356_15725 serine hydroxymethyltransferase — —
Pseudomonas sp. S08-1 0.33 OH686_16305 Glutamate 5-kinase / RNA-binding C-terminal domain PUA 0.76 OH686_16230 Serine hydroxymethyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_5103 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.75 Pf6N2E2_5082 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_1472 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.75 PfGW456L13_1451 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Pectobacterium carotovorum WPP14 0.33 HER17_RS04700 glutamate 5-kinase 0.71 HER17_RS05950 serine hydroxymethyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.33 Psyr_0704 glutamate 5-kinase 0.75 Psyr_4270 serine hydroxymethyltransferase 0.83 20
Pseudomonas syringae pv. syringae B728a ΔmexB 0.33 Psyr_0704 glutamate 5-kinase 0.75 Psyr_4270 serine hydroxymethyltransferase 0.90 8
Azospirillum sp. SherDot2 0.33 MPMX19_01933 Glutamate 5-kinase 0.58 MPMX19_00727 Serine hydroxymethyltransferase 2 — —
Rhizobium sp. OAE497 0.33 ABIE40_RS18920 glutamate 5-kinase 0.62 ABIE40_RS06715 serine hydroxymethyltransferase — —
Sinorhizobium meliloti 1021 0.33 SMc03776 gamma-glutamyl kinase 0.60 SMc01770 serine hydroxymethyltransferase 0.88 27
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_11575 glutamate 5-kinase 0.69 CSW01_04820 serine hydroxymethyltransferase low > 62
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_14115 gamma-glutamyl kinase 0.76 AO353_14020 serine hydroxymethyltransferase — —
Variovorax sp. SCN45 0.32 GFF2515 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.65 GFF560 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Pseudomonas stutzeri RCH2 0.32 Psest_3384 glutamate 5-kinase 0.77 Psest_3404 Glycine/serine hydroxymethyltransferase — —
Agrobacterium fabrum C58 0.32 Atu2780 gamma-glutamyl kinase 0.61 Atu1165 serine hydroxymethyltransferase — —
Desulfovibrio vulgaris Miyazaki F 0.32 DvMF_1377 gamma-glutamyl kinase (RefSeq) 0.60 DvMF_3097 glyA serine hydroxymethyltransferase (RefSeq) — —
Desulfovibrio vulgaris Hildenborough JW710 0.31 DVU0930 proB glutamate 5-kinase (TIGR) 0.61 DVU1203 glyA serine hydroxymethyltransferase (TIGR) — —
Rhodospirillum rubrum S1H 0.30 Rru_A1239 Glutamate 5-kinase, ProB-related (NCBI) 0.57 Rru_A1827 Glycine hydroxymethyltransferase (NCBI) 0.67 37
Hydrogenophaga sp. GW460-11-11-14-LB1 0.30 GFF1274 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.65 GFF5152 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Dinoroseobacter shibae DFL-12 0.30 Dshi_1467 glutamate 5-kinase (RefSeq) 0.61 Dshi_0821 Glycine hydroxymethyltransferase (RefSeq) — —
Rhodopseudomonas palustris CGA009 0.30 TX73_000850 glutamate 5-kinase 0.58 TX73_014115 serine hydroxymethyltransferase — —
Bosea sp. OAE506 0.30 ABIE41_RS07585 glutamate 5-kinase 0.61 ABIE41_RS19780 serine hydroxymethyltransferase — —
Acinetobacter radioresistens SK82 0.30 MPMX26_02135 Glutamate 5-kinase 0.73 MPMX26_02049 Serine hydroxymethyltransferase — —
Marinobacter adhaerens HP15 0.29 HP15_508 gamma-glutamyl kinase 0.75 HP15_489 glycine hydroxymethyltransferase — —
Phaeobacter inhibens DSM 17395 0.29 PGA1_c15510 glutamate 5-kinase ProB 0.60 PGA1_c11870 serine hydroxymethyltransferase GlyA 0.82 7
Caulobacter crescentus NA1000 0.29 CCNA_00316 glutamate 5-kinase 0.57 CCNA_01419 serine hydroxymethyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_00316 glutamate 5-kinase 0.57 CCNA_01419 serine hydroxymethyltransferase 0.61 43
Brevundimonas sp. GW460-12-10-14-LB2 0.27 A4249_RS16125 glutamate 5-kinase 0.55 A4249_RS06040 serine hydroxymethyltransferase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.27 ABZR88_RS22170 glutamate 5-kinase 0.52 ABZR88_RS00640 serine hydroxymethyltransferase 0.75 25
Echinicola vietnamensis KMM 6221, DSM 17526 0.25 Echvi_4033 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.53 Echvi_1188 Glycine/serine hydroxymethyltransferase 0.72 29
Pedobacter sp. GW460-11-11-14-LB5 0.25 CA265_RS20855 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.52 CA265_RS19165 serine hydroxymethyltransferase 0.89 43
Mycobacterium tuberculosis H37Rv 0.24 Rv2439c Probable glutamate 5-kinase protein ProB (gamma-glutamyl kinase) (GK) 0.54 Rv0070c Serine hydroxymethyltransferase GlyA2 (serine methylase 2) (SHMT 2) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.24 CA264_07725 glutamate 5-kinase 0.53 CA264_17045 serine hydroxymethyltransferase 0.41 46
Sphingomonas koreensis DSMZ 15582 0.24 Ga0059261_3512 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.54 Ga0059261_1986 Glycine/serine hydroxymethyltransferase 0.90 26
Bacteroides thetaiotaomicron VPI-5482 0.24 BT3719 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.55 BT0738 serine hydroxymethyltransferase (NCBI ptt file) 0.81 42
Phocaeicola vulgatus CL09T03C04 0.23 HMPREF1058_RS08650 glutamate 5-kinase 0.55 HMPREF1058_RS03800 serine hydroxymethyltransferase 0.80 43
Parabacteroides merdae CL09T00C40 0.23 HMPREF1078_RS10650 glutamate 5-kinase 0.54 HMPREF1078_RS02145 serine hydroxymethyltransferase low > 61
Phocaeicola dorei CL03T12C01 0.23 ABI39_RS02880 glutamate 5-kinase 0.55 ABI39_RS17420 serine hydroxymethyltransferase 0.65 55
Bacteroides ovatus ATCC 8483 0.23 BACOVA_03537 glutamate 5-kinase 0.55 BACOVA_02446 glycine hydroxymethyltransferase 0.95 10
Bacteroides stercoris CC31F 0.23 HMPREF1181_RS03325 glutamate 5-kinase 0.55 HMPREF1181_RS15010 serine hydroxymethyltransferase low > 56

Not shown: 1 genomes with orthologs for Xcc-8004.2326.1 only; 1 genomes with orthologs for Xcc-8004.4398.1 only