Conservation of cofitness between Xcc-8004.1059.1 and Xcc-8004.1053.1 in Xanthomonas campestris pv. campestris strain 8004

98 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.1059.1 Acetolactate synthase large subunit (EC 2.2.1.6) 1.0 Xcc-8004.1053.1 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.85 20
Lysobacter sp. OAE881 0.69 ABIE51_RS17550 acetolactate synthase 2 catalytic subunit 0.44 ABIE51_RS17585 3-isopropylmalate dehydrogenase 0.96 9
Dickeya dadantii 3937 0.58 DDA3937_RS20170 acetolactate synthase 2 catalytic subunit 0.47 DDA3937_RS18120 3-isopropylmalate dehydrogenase low > 74
Dickeya dianthicola 67-19 0.57 HGI48_RS20310 acetolactate synthase 2 catalytic subunit 0.47 HGI48_RS18060 3-isopropylmalate dehydrogenase low > 71
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS10020 acetolactate synthase 2 catalytic subunit 0.41 A4249_RS09995 3-isopropylmalate dehydrogenase 0.99 10
Dickeya dianthicola ME23 0.57 DZA65_RS21350 acetolactate synthase 2 catalytic subunit 0.47 DZA65_RS19205 3-isopropylmalate dehydrogenase 0.66 5
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF2904 Acetolactate synthase large subunit (EC 2.2.1.6) 0.47 GFF165 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 78
Pectobacterium carotovorum WPP14 0.57 HER17_RS01060 acetolactate synthase 2 catalytic subunit 0.47 HER17_RS03080 3-isopropylmalate dehydrogenase low > 75
Enterobacter asburiae PDN3 0.57 EX28DRAFT_4440 acetolactate synthase, large subunit (EC 2.2.1.6) 0.49 EX28DRAFT_3669 3-isopropylmalate dehydrogenase 0.90 3
Rahnella sp. WP5 0.57 EX31_RS14990 acetolactate synthase 2 catalytic subunit 0.48 EX31_RS03685 3-isopropylmalate dehydrogenase 0.80 15
Klebsiella michiganensis M5al 0.56 BWI76_RS00960 acetolactate synthase 2 catalytic subunit 0.48 BWI76_RS04675 3-isopropylmalate dehydrogenase 0.71 14
Escherichia coli ECOR38 0.56 HEPCGN_13365 ilvG acetolactate synthase 2 catalytic subunit 0.47 HEPCGN_08700 leuB 3-isopropylmalate dehydrogenase 0.96 7
Serratia liquefaciens MT49 0.56 IAI46_24360 acetolactate synthase 2 catalytic subunit 0.48 IAI46_03350 3-isopropylmalate dehydrogenase low > 86
Escherichia coli Nissle 1917 0.56 ECOLIN_RS21650 acetolactate synthase 2 catalytic subunit 0.47 ECOLIN_RS00395 3-isopropylmalate dehydrogenase low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.56 OHPLBJKB_04285 Acetolactate synthase isozyme 2 large subunit 0.47 OHPLBJKB_03584 3-isopropylmalate dehydrogenase low > 73
Escherichia coli BL21 0.56 ECD_03646 acetolactate synthase II, valine insensitive, large subunit 0.47 ECD_00075 3-isopropylmalate dehydrogenase, NAD(+)-dependent 0.84 4
Escherichia fergusonii Becca 0.56 EFB2_04868 Acetolactate synthase isozyme 2 large subunit 0.47 EFB2_03972 3-isopropylmalate dehydrogenase low > 86
Escherichia coli ECRC102 0.56 NIAGMN_12410 ilvG acetolactate synthase 2 catalytic subunit 0.47 NIAGMN_08570 leuB 3-isopropylmalate dehydrogenase
Escherichia coli ECRC100 0.56 OKFHMN_14655 ilvG acetolactate synthase 2 catalytic subunit 0.47 OKFHMN_10720 leuB 3-isopropylmalate dehydrogenase 0.98 10
Escherichia coli ECRC101 0.56 MCAODC_05160 ilvG acetolactate synthase 2 catalytic subunit 0.47 MCAODC_01235 leuB 3-isopropylmalate dehydrogenase 0.90 18
Escherichia coli ECRC99 0.56 KEDOAH_13495 ilvG acetolactate synthase 2 catalytic subunit 0.47 KEDOAH_17435 leuB 3-isopropylmalate dehydrogenase
Escherichia coli ECOR27 0.56 NOLOHH_06790 ilvG acetolactate synthase 2 catalytic subunit 0.47 NOLOHH_03065 leuA 2-isopropylmalate synthase 0.93 32
Escherichia coli ECRC98 0.56 JDDGAC_18275 ilvG acetolactate synthase 2 catalytic subunit 0.47 JDDGAC_14315 leuB 3-isopropylmalate dehydrogenase 0.93 18
Enterobacter sp. TBS_079 0.56 MPMX20_04502 Acetolactate synthase isozyme 2 large subunit 0.48 MPMX20_00768 3-isopropylmalate dehydrogenase 0.62 15
Escherichia coli ECRC62 0.56 BNILDI_04735 ilvG acetolactate synthase 2 catalytic subunit 0.47 BNILDI_08545 leuA 2-isopropylmalate synthase 0.95 13
Pantoea sp. MT58 0.56 IAI47_01020 acetolactate synthase 2 catalytic subunit 0.45 IAI47_16005 3-isopropylmalate dehydrogenase 0.70 6
Erwinia tracheiphila SCR3 0.55 LU632_RS24415 ilvG acetolactate synthase 2 catalytic subunit 0.44 LU632_RS02875 leuB 3-isopropylmalate dehydrogenase 0.55 54
Shewanella amazonensis SB2B 0.54 Sama_3281 acetolactate synthase 2 catalytic subunit (RefSeq) 0.47 Sama_0336 3-isopropylmalate dehydrogenase (RefSeq) 0.83 12
Shewanella sp. ANA-3 0.54 Shewana3_0356 acetolactate synthase 2 catalytic subunit (RefSeq) 0.47 Shewana3_3760 3-isopropylmalate dehydrogenase (RefSeq) 0.84 32
Shewanella oneidensis MR-1 0.54 SO4347 ilvG acetolactate synthase II, large subunit (NCBI ptt file) 0.47 SO4235 leuB 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.92 3
Shewanella loihica PV-4 0.53 Shew_0289 acetolactate synthase 2 catalytic subunit (RefSeq) 0.47 Shew_3471 3-isopropylmalate dehydrogenase (RefSeq) 0.68 45
Marinobacter adhaerens HP15 0.52 HP15_1017 acetolactate synthase, large subunit, biosynthetic type 0.66 HP15_1832 3-isopropylmalate dehydrogenase low > 73
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_00155 acetolactate synthase 2 catalytic subunit 0.48 CSW01_12600 3-isopropylmalate dehydrogenase low > 62
Azospirillum sp. SherDot2 0.43 MPMX19_01776 Acetolactate synthase isozyme 3 large subunit 0.52 MPMX19_00607 3-isopropylmalate dehydrogenase
Dechlorosoma suillum PS 0.43 Dsui_1925 acetolactate synthase, large subunit, biosynthetic type 0.62 Dsui_3198 3-isopropylmalate dehydrogenase
Synechococcus elongatus PCC 7942 0.43 Synpcc7942_0139 ilvB acetolactate synthase 3 catalytic subunit 0.52 Synpcc7942_1505 leuB 3-isopropylmalate dehydrogenase
Magnetospirillum magneticum AMB-1 0.43 AMB_RS17740 acetolactate synthase 3 large subunit 0.52 AMB_RS20570 3-isopropylmalate dehydrogenase
Desulfovibrio vulgaris Miyazaki F 0.42 DvMF_0153 acetolactate synthase, large subunit, biosynthetic type (RefSeq) 0.57 DvMF_1794 3-isopropylmalate dehydrogenase (RefSeq) 0.90 11
Phocaeicola vulgatus CL09T03C04 0.42 HMPREF1058_RS16820 biosynthetic-type acetolactate synthase large subunit 0.39 HMPREF1058_RS14565 3-isopropylmalate dehydrogenase low > 67
Azospirillum brasilense Sp245 0.42 AZOBR_RS06560 acetolactate synthase 0.51 AZOBR_RS14130 3-isopropylmalate dehydrogenase low > 97
Desulfovibrio vulgaris Hildenborough JW710 0.42 DVU1376 ilvB-2 acetolactate synthase, large subunit, biosynthetic type (TIGR) 0.53 DVU2985 leuB 3-isopropylmalate dehydrogenase (TIGR) 0.93 4
Variovorax sp. SCN45 0.42 GFF903 Acetolactate synthase large subunit (EC 2.2.1.6) 0.59 GFF3888 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 127
Bacteroides stercoris CC31F 0.42 HMPREF1181_RS08330 biosynthetic-type acetolactate synthase large subunit 0.40 HMPREF1181_RS14125 3-isopropylmalate dehydrogenase 0.93 5
Echinicola vietnamensis KMM 6221, DSM 17526 0.42 Echvi_2056 acetolactate synthase, large subunit, biosynthetic type 0.41 Echvi_2062 3-isopropylmalate dehydrogenase
Phocaeicola dorei CL03T12C01 0.42 ABI39_RS12720 biosynthetic-type acetolactate synthase large subunit 0.39 ABI39_RS10215 3-isopropylmalate dehydrogenase 0.90 4
Pedobacter sp. GW460-11-11-14-LB5 0.41 CA265_RS15805 acetolactate synthase, large subunit, biosynthetic type 0.46 CA265_RS15850 3-isopropylmalate dehydrogenase 0.94 10
Caulobacter crescentus NA1000 Δfur 0.41 CCNA_02185 acetolactate synthase large subunit 0.48 CCNA_00193 3-isopropylmalate dehydrogenase low > 67
Escherichia coli BW25113 0.41 b3671 ilvB acetolactate synthase large subunit (NCBI) 0.47 b0073 leuB 3-isopropylmalate dehydrogenase (VIMSS) 0.79 3
Caulobacter crescentus NA1000 0.41 CCNA_02185 acetolactate synthase large subunit 0.48 CCNA_00193 3-isopropylmalate dehydrogenase 0.92 23
Bosea sp. OAE506 0.41 ABIE41_RS12890 acetolactate synthase 3 large subunit 0.49 ABIE41_RS11860 3-isopropylmalate dehydrogenase
Sinorhizobium meliloti 1021 0.41 SMc01431 acetolactate synthase 3 catalytic subunit 0.52 SMc04405 3-isopropylmalate dehydrogenase 0.97 11
Mucilaginibacter yixingensis YX-36 DSM 26809 0.41 ABZR88_RS11580 biosynthetic-type acetolactate synthase large subunit 0.47 ABZR88_RS11605 3-isopropylmalate dehydrogenase
Pontibacter actiniarum KMM 6156, DSM 19842 0.41 CA264_06930 acetolactate synthase, large subunit, biosynthetic type 0.40 CA264_09445 3-isopropylmalate dehydrogenase low > 74
Bacteroides thetaiotaomicron VPI-5482 0.41 BT2077 acetolactate synthase large subunit (NCBI ptt file) 0.39 BT1857 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.90 28
Castellaniella sp019104865 MT123 0.41 ABCV34_RS12235 biosynthetic-type acetolactate synthase large subunit 0.60 ABCV34_RS04280 3-isopropylmalate dehydrogenase low > 48
Bacteroides ovatus ATCC 8483 0.41 BACOVA_03303 acetolactate synthase, large subunit, biosynthetic type 0.38 BACOVA_04600 3-isopropylmalate dehydrogenase 0.98 6
Rhodospirillum rubrum S1H 0.41 Rru_A0467 Acetolactate synthase, large subunit, biosynthetic type (NCBI) 0.53 Rru_A1191 3-isopropylmalate dehydrogenase (NCBI) 0.87 20
Variovorax sp. OAS795 0.41 ABID97_RS12545 biosynthetic-type acetolactate synthase large subunit 0.59 ABID97_RS08455 3-isopropylmalate dehydrogenase
Mycobacterium tuberculosis H37Rv 0.41 Rv3003c Acetolactate synthase (large subunit) IlvB1 (acetohydroxy-acid synthase) 0.26 Rv2995c Probable 3-isopropylmalate dehydrogenase LeuB (beta-IPM dehydrogenase) (IMDH) (3-IPM-DH)
Phaeobacter inhibens DSM 17395 0.41 PGA1_c20210 acetolactate synthase isozyme 3 large subunit 0.55 PGA1_c29830 3-isopropylmalate dehydrogenase LeuB 0.91 2
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF2981 Acetolactate synthase large subunit (EC 2.2.1.6) 0.59 GFF3360 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 90
Rhizobium sp. OAE497 0.40 ABIE40_RS11495 acetolactate synthase 3 large subunit 0.52 ABIE40_RS19050 3-isopropylmalate dehydrogenase 0.89 30
Parabacteroides merdae CL09T00C40 0.40 HMPREF1078_RS16690 biosynthetic-type acetolactate synthase large subunit 0.41 HMPREF1078_RS16640 3-isopropylmalate dehydrogenase 0.94 6
Dinoroseobacter shibae DFL-12 0.40 Dshi_1779 acetolactate synthase, large subunit, biosynthetic type (RefSeq) 0.55 Dshi_0081 3-isopropylmalate dehydrogenase (RefSeq)
Ralstonia solanacearum GMI1000 0.40 RS_RS10420 acetolactate synthase 3 large subunit 0.59 RS_RS09990 3-isopropylmalate dehydrogenase
Ralstonia solanacearum PSI07 0.40 RPSI07_RS14255 acetolactate synthase, large subunit, biosynthetic type 0.58 RPSI07_RS14705 3-isopropylmalate dehydrogenase
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_0068 acetolactate synthase, large subunit (EC 2.2.1.6) 0.53 Ga0059261_3190 3-isopropylmalate dehydrogenase 0.97 27
Ralstonia solanacearum UW163 0.40 UW163_RS10675 acetolactate synthase 3 large subunit 0.58 UW163_RS11115 3-isopropylmalate dehydrogenase
Paraburkholderia bryophila 376MFSha3.1 0.40 H281DRAFT_04551 acetolactate synthase, large subunit 0.58 H281DRAFT_06072 3-isopropylmalate dehydrogenase
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS03050 acetolactate synthase 3 large subunit 0.58 RALBFv3_RS02610 3-isopropylmalate dehydrogenase
Agrobacterium fabrum C58 0.39 Atu2036 acetolactate synthase III, large subunit 0.52 Atu2791 3-isopropylmalate dehydrogenase 0.88 16
Ralstonia sp. UNC404CL21Col 0.39 ABZR87_RS14955 acetolactate synthase 3 catalytic subunit 0.58 ABZR87_RS14530 3-isopropylmalate dehydrogenase 0.66 44
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS06545 acetolactate synthase 0.58 BPHYT_RS33900 3-isopropylmalate dehydrogenase 0.95 8
Cupriavidus basilensis FW507-4G11 0.39 RR42_RS05435 acetolactate synthase 3 catalytic subunit 0.58 RR42_RS14385 3-isopropylmalate dehydrogenase
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS08650 acetolactate synthase 0.59 HSERO_RS16500 3-isopropylmalate dehydrogenase 0.95 5
Rhodopseudomonas palustris CGA009 0.39 TX73_010465 acetolactate synthase 3 large subunit 0.48 TX73_001175 3-isopropylmalate dehydrogenase
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS24225 acetolactate synthase 3 catalytic subunit 0.57 QEN71_RS17620 3-isopropylmalate dehydrogenase 0.81 57
Paraburkholderia graminis OAS925 0.39 ABIE53_001574 acetolactate synthase-1/2/3 large subunit 0.58 ABIE53_004804 3-isopropylmalate dehydrogenase
Pseudomonas sp. S08-1 0.37 OH686_08130 acetolactate synthase, large subunit, biosynthetic type 0.81 OH686_04470 3-isopropylmalate dehydrogenase 0.96 1
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_0846 acetolactate synthase, large subunit 0.78 Psyr_1985 3-isopropylmalate dehydrogenase 0.89 8
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_0846 acetolactate synthase, large subunit 0.78 Psyr_1985 3-isopropylmalate dehydrogenase 0.91 16
Acinetobacter radioresistens SK82 0.37 MPMX26_00472 Acetolactate synthase isozyme 3 large subunit 0.67 MPMX26_00348 3-isopropylmalate dehydrogenase 0.99 2
Pseudomonas stutzeri RCH2 0.37 Psest_1036 acetolactate synthase, large subunit, biosynthetic type 0.80 Psest_2589 3-isopropylmalate dehydrogenase
Alteromonas macleodii MIT1002 0.37 MIT1002_00503 Acetolactate synthase isozyme 3 large subunit 0.46 MIT1002_00948 3-isopropylmalate dehydrogenase 0.98 7
Pseudomonas putida KT2440 0.36 PP_4680 acetohydroxybutanoate synthase / acetolactate synthase 0.78 PP_1988 3-isopropylmalate dehydrogenase 0.94 6
Dyella japonica UNC79MFTsu3.2 0.36 ABZR86_RS15935 biosynthetic-type acetolactate synthase large subunit 0.39 ABZR86_RS15950 3-isopropylmalate dehydrogenase 0.95 32
Acidovorax sp. GW101-3H11 0.36 Ac3H11_525 Acetolactate synthase large subunit (EC 2.2.1.6) 0.59 Ac3H11_1528 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.74 32
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_1538 Acetolactate synthase large subunit (EC 2.2.1.6) 0.79 PfGW456L13_3945 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.95 3
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_16170 acetolactate synthase 3 catalytic subunit 0.79 AO356_21415 3-isopropylmalate dehydrogenase 0.95 9
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_2878 Acetolactate synthase large subunit (EC 2.2.1.6) 0.78 Pf1N1B4_12 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.83 24
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS25650 acetolactate synthase 3 large subunit 0.79 PFLU_RS20565 3-isopropylmalate dehydrogenase
Pseudomonas fluorescens SBW25 0.36 PFLU_RS25650 acetolactate synthase 3 large subunit 0.79 PFLU_RS20565 3-isopropylmalate dehydrogenase
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_14495 acetolactate synthase 3 catalytic subunit 0.77 AO353_20635 3-isopropylmalate dehydrogenase 0.86 10
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_5175 Acetolactate synthase large subunit (EC 2.2.1.6) 0.79 Pf6N2E2_66 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.92 12
Pseudomonas sp. RS175 0.35 PFR28_03699 Acetolactate synthase isozyme 3 large subunit 0.78 PFR28_02821 3-isopropylmalate dehydrogenase 0.68 10
Pseudomonas simiae WCS417 0.35 PS417_23810 acetolactate synthase 3 catalytic subunit 0.79 PS417_18585 3-isopropylmalate dehydrogenase 0.92 7
Rhodanobacter denitrificans MT42 0.33 LRK55_RS09950 biosynthetic-type acetolactate synthase large subunit 0.42 LRK55_RS09965 3-isopropylmalate dehydrogenase low > 63
Rhodanobacter denitrificans FW104-10B01 0.33 LRK54_RS10310 biosynthetic-type acetolactate synthase large subunit 0.41 LRK54_RS10325 3-isopropylmalate dehydrogenase 0.95 3
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_13610 ilvB biosynthetic-type acetolactate synthase large subunit 0.41 OKGIIK_13595 leuB 3-isopropylmalate dehydrogenase low > 52

Not shown: 3 genomes with orthologs for Xcc-8004.1059.1 only; 1 genomes with orthologs for Xcc-8004.1053.1 only