Conservation of cofitness between TX73_013920 and TX73_001825 in Rhodopseudomonas palustris CGA009

99 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_013920 4-hydroxy-tetrahydrodipicolinate synthase 1.0 TX73_001825 translation elongation factor 4 0.57 12
Bosea sp. OAE506 0.76 ABIE41_RS19960 4-hydroxy-tetrahydrodipicolinate synthase 0.82 ABIE41_RS03260 translation elongation factor 4 — —
Dinoroseobacter shibae DFL-12 0.60 Dshi_0149 dihydrodipicolinate synthase (RefSeq) 0.74 Dshi_0809 GTP-binding protein LepA (RefSeq) — —
Sinorhizobium meliloti 1021 0.60 SMc02404 dihydrodipicolinate synthase 0.82 SMc00349 GTP-binding protein LepA — —
Rhizobium sp. OAE497 0.60 ABIE40_RS06030 4-hydroxy-tetrahydrodipicolinate synthase 0.83 ABIE40_RS01055 translation elongation factor 4 — —
Agrobacterium fabrum C58 0.60 Atu1024 dihydrodipicolinate synthase 0.84 Atu0241 GTP-binding protein LepA — —
Azospirillum sp. SherDot2 0.60 MPMX19_01219 4-hydroxy-tetrahydrodipicolinate synthase 0.77 MPMX19_00092 Elongation factor 4 — —
Rhodospirillum rubrum S1H 0.58 Rru_A1865 Dihydrodipicolinate synthase subfamily (NCBI) 0.72 Rru_A3365 Small GTP-binding protein domain (NCBI) — —
Azospirillum brasilense Sp245 0.58 AZOBR_RS08420 dihydrodipicolinate synthase 0.76 AZOBR_RS00860 elongation factor 4 — —
Magnetospirillum magneticum AMB-1 0.57 AMB_RS12805 4-hydroxy-tetrahydrodipicolinate synthase 0.77 AMB_RS19545 elongation factor 4 — —
Caulobacter crescentus NA1000 Δfur 0.56 CCNA_01253 dihydrodipicolinate synthase 0.80 CCNA_01086 GTP-binding protein lepA — —
Caulobacter crescentus NA1000 0.56 CCNA_01253 dihydrodipicolinate synthase 0.80 CCNA_01086 GTP-binding protein lepA — —
Phaeobacter inhibens DSM 17395 0.55 PGA1_c28930 dihydrodipicolinate synthase DapA 0.73 PGA1_c24090 GTP-binding protein LepA — —
Desulfovibrio vulgaris Miyazaki F 0.49 DvMF_0562 dihydrodipicolinate synthase (RefSeq) 0.63 DvMF_2717 GTP-binding protein LepA (RefSeq) — —
Desulfovibrio vulgaris Hildenborough JW710 0.48 DVU1868 dapA dihydrodipicolinate synthase (TIGR) 0.64 DVU0703 lepA GTP-binding protein LepA (TIGR) — —
Pseudomonas sp. RS175 0.43 PFR28_00699 4-hydroxy-tetrahydrodipicolinate synthase 0.61 PFR28_03525 Elongation factor 4 — —
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS07275 4-hydroxy-tetrahydrodipicolinate synthase 0.61 PFLU_RS05250 elongation factor 4 0.38 3
Pseudomonas fluorescens SBW25 0.43 PFLU_RS07275 4-hydroxy-tetrahydrodipicolinate synthase 0.61 PFLU_RS05250 elongation factor 4 low > 109
Variovorax sp. OAS795 0.43 ABID97_RS20125 4-hydroxy-tetrahydrodipicolinate synthase 0.59 ABID97_RS08350 translation elongation factor 4 low > 91
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_04530 4-hydroxy-tetrahydrodipicolinate synthase 0.61 AO356_17485 elongation factor 4 — —
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_2747 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.61 Pf6N2E2_5423 Translation elongation factor LepA — —
Ralstonia solanacearum GMI1000 0.43 RS_RS05700 4-hydroxy-tetrahydrodipicolinate synthase 0.60 RS_RS05250 elongation factor 4 — —
Dechlorosoma suillum PS 0.43 Dsui_1977 dihydrodipicolinate synthase 0.63 Dsui_2457 GTP-binding protein LepA — —
Ralstonia solanacearum UW163 0.43 UW163_RS12360 4-hydroxy-tetrahydrodipicolinate synthase 0.60 UW163_RS11935 elongation factor 4 — —
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_4507 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.60 PfGW456L13_4842 Translation elongation factor LepA low > 87
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS14890 4-hydroxy-tetrahydrodipicolinate synthase 0.60 RALBFv3_RS14470 elongation factor 4 — —
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_1548 dihydrodipicolinate synthase 0.61 Psyr_3954 GTP-binding protein LepA — —
Pseudomonas simiae WCS417 0.43 PS417_07165 dihydrodipicolinate synthase 0.61 PS417_05180 elongation factor 4 — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_1548 dihydrodipicolinate synthase 0.61 Psyr_3954 GTP-binding protein LepA — —
Variovorax sp. SCN45 0.43 GFF2740 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.59 GFF3867 Translation elongation factor LepA low > 127
Brevundimonas sp. GW460-12-10-14-LB2 0.43 A4249_RS05475 4-hydroxy-tetrahydrodipicolinate synthase 0.80 A4249_RS10390 translation elongation factor 4 — —
Ralstonia solanacearum PSI07 0.43 RPSI07_RS18470 4-hydroxy-tetrahydrodipicolinate synthase 0.62 RPSI07_RS18990 elongation factor 4 low > 81
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_3332 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.60 Pf1N1B4_895 Translation elongation factor LepA — —
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS10545 4-hydroxy-tetrahydrodipicolinate synthase 0.59 ABZR87_RS10190 translation elongation factor 4 — —
Klebsiella michiganensis M5al 0.42 BWI76_RS20905 4-hydroxy-tetrahydrodipicolinate synthase 0.60 BWI76_RS21335 elongation factor 4 — —
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS05940 4-hydroxy-tetrahydrodipicolinate synthase 0.62 QEN71_RS04600 translation elongation factor 4 — —
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_17670 4-hydroxy-tetrahydrodipicolinate synthase 0.61 AO353_04520 elongation factor 4 — —
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS06250 dihydrodipicolinate synthase 0.60 RR42_RS14055 elongation factor 4 low > 128
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS16395 dihydrodipicolinate synthase 0.63 HSERO_RS09650 elongation factor 4 — —
Enterobacter asburiae PDN3 0.41 EX28DRAFT_0182 4-hydroxy-tetrahydrodipicolinate synthase 0.59 EX28DRAFT_0076 elongation factor 4 — —
Acinetobacter radioresistens SK82 0.41 MPMX26_02982 4-hydroxy-tetrahydrodipicolinate synthase 0.57 MPMX26_02159 Elongation factor 4 — —
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS12615 dihydrodipicolinate synthase 0.63 BPHYT_RS14380 elongation factor 4 0.34 47
Kangiella aquimarina DSM 16071 0.41 B158DRAFT_2444 dihydrodipicolinate synthase 0.62 B158DRAFT_2184 GTP-binding protein LepA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF2180 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.58 GFF2477 Translation elongation factor LepA — —
Enterobacter sp. TBS_079 0.41 MPMX20_03340 4-hydroxy-tetrahydrodipicolinate synthase 0.59 MPMX20_03440 Elongation factor 4 — —
Pseudomonas stutzeri RCH2 0.41 Psest_1515 dihydrodipicolinate synthase 0.61 Psest_3095 GTP-binding protein LepA — —
Sphingomonas koreensis DSMZ 15582 0.41 Ga0059261_0213 4-hydroxy-tetrahydrodipicolinate synthase 0.74 Ga0059261_3979 elongation factor 4 — —
Pseudomonas sp. S08-1 0.41 OH686_19215 4-hydroxy-tetrahydrodipicolinate synthase 0.62 OH686_20065 elongation factor 4 — —
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_00509 dihydrodipicolinate synthase 0.63 H281DRAFT_04360 GTP-binding protein LepA — —
Erwinia tracheiphila SCR3 0.40 LU632_RS08325 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.59 LU632_RS15395 lepA translation elongation factor 4 — —
Paraburkholderia graminis OAS925 0.40 ABIE53_002749 4-hydroxy-tetrahydrodipicolinate synthase 0.63 ABIE53_003038 GTP-binding protein LepA — —
Escherichia coli BW25113 0.40 b2478 dapA dihydrodipicolinate synthase (NCBI) 0.59 b2569 lepA GTP-binding protein LepA (NCBI) — —
Escherichia coli ECOR38 0.40 HEPCGN_21085 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.59 HEPCGN_20545 lepA translation elongation factor 4 — —
Escherichia coli Nissle 1917 0.40 ECOLIN_RS14145 4-hydroxy-tetrahydrodipicolinate synthase 0.59 ECOLIN_RS14540 translation elongation factor 4 — —
Escherichia coli ECRC101 0.40 MCAODC_12445 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.59 MCAODC_11930 lepA translation elongation factor 4 — —
Escherichia coli ECRC100 0.40 OKFHMN_21915 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.59 OKFHMN_21400 lepA translation elongation factor 4 — —
Escherichia fergusonii Becca 0.40 EFB2_01408 4-hydroxy-tetrahydrodipicolinate synthase 0.59 EFB2_01327 Elongation factor 4 — —
Escherichia coli ECRC98 0.40 JDDGAC_25860 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.59 JDDGAC_25065 lepA translation elongation factor 4 — —
Escherichia coli ECRC102 0.40 NIAGMN_19685 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.59 NIAGMN_19170 lepA translation elongation factor 4 — —
Escherichia coli ECRC99 0.40 KEDOAH_06305 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.59 KEDOAH_06820 lepA translation elongation factor 4 — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_01251 4-hydroxy-tetrahydrodipicolinate synthase 0.59 OHPLBJKB_01138 Elongation factor 4 — —
Pantoea sp. MT58 0.40 IAI47_05265 4-hydroxy-tetrahydrodipicolinate synthase 0.58 IAI47_04870 elongation factor 4 — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF5565 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.62 GFF3343 Translation elongation factor LepA — —
Escherichia coli ECOR27 0.40 NOLOHH_13575 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.59 NOLOHH_13075 lepA translation elongation factor 4 — —
Escherichia coli ECRC62 0.40 BNILDI_12385 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.59 BNILDI_11875 lepA translation elongation factor 4 — —
Escherichia coli BL21 0.40 ECD_02370 dihydrodipicolinate synthase 0.59 ECD_02463 back-translocating elongation factor EF4, GTPase — —
Pseudomonas putida KT2440 0.40 PP_1237 4-hydroxy-tetrahydrodipicolinate synthase 0.62 PP_1431 Elongation factor 4 — —
Pectobacterium carotovorum WPP14 0.40 HER17_RS15415 4-hydroxy-tetrahydrodipicolinate synthase 0.59 HER17_RS05805 translation elongation factor 4 — —
Dickeya dianthicola 67-19 0.40 HGI48_RS06110 4-hydroxy-tetrahydrodipicolinate synthase 0.60 HGI48_RS15830 elongation factor 4 — —
Rahnella sp. WP5 0.40 EX31_RS22740 4-hydroxy-tetrahydrodipicolinate synthase 0.59 EX31_RS21825 elongation factor 4 low > 89
Dickeya dadantii 3937 0.40 DDA3937_RS06065 4-hydroxy-tetrahydrodipicolinate synthase 0.60 DDA3937_RS15745 elongation factor 4 — —
Acidovorax sp. GW101-3H11 0.39 Ac3H11_277 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.60 Ac3H11_1569 Translation elongation factor LepA low > 79
Castellaniella sp019104865 MT123 0.39 ABCV34_RS15825 4-hydroxy-tetrahydrodipicolinate synthase 0.60 ABCV34_RS08335 translation elongation factor 4 — —
Serratia liquefaciens MT49 0.39 IAI46_18780 4-hydroxy-tetrahydrodipicolinate synthase 0.59 IAI46_19560 elongation factor 4 low > 86
Dickeya dianthicola ME23 0.39 DZA65_RS06460 4-hydroxy-tetrahydrodipicolinate synthase 0.60 DZA65_RS16910 elongation factor 4 — —
Marinobacter adhaerens HP15 0.39 HP15_2027 dihydrodipicolinate synthase 0.61 HP15_781 GTP-binding protein LepA — —
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_10755 4-hydroxy-tetrahydrodipicolinate synthase 0.59 CSW01_12465 elongation factor 4 — —
Alteromonas macleodii MIT1002 0.38 MIT1002_02207 4-hydroxy-tetrahydrodipicolinate synthase 0.61 MIT1002_02715 Elongation factor 4 — —
Shewanella loihica PV-4 0.36 Shew_1848 dihydrodipicolinate synthase (RefSeq) 0.60 Shew_1052 GTP-binding protein LepA (RefSeq) — —
Shewanella amazonensis SB2B 0.36 Sama_1908 dihydrodipicolinate synthase (RefSeq) 0.61 Sama_0878 GTP-binding protein LepA (RefSeq) — —
Shewanella oneidensis MR-1 0.35 SO1879 dapA dihydrodipicolinate synthase (NCBI ptt file) 0.62 SO1346 lepA GTP-binding protein LepA (NCBI ptt file) — —
Shewanella sp. ANA-3 0.35 Shewana3_1656 dihydrodipicolinate synthase (RefSeq) 0.62 Shewana3_3028 GTP-binding protein LepA (RefSeq) — —
Phocaeicola dorei CL03T12C01 0.34 ABI39_RS17235 4-hydroxy-tetrahydrodipicolinate synthase 0.55 ABI39_RS20175 translation elongation factor 4 — —
Phocaeicola vulgatus CL09T03C04 0.34 HMPREF1058_RS03990 4-hydroxy-tetrahydrodipicolinate synthase 0.55 HMPREF1058_RS06410 elongation factor 4 — —
Parabacteroides merdae CL09T00C40 0.34 HMPREF1078_RS01735 4-hydroxy-tetrahydrodipicolinate synthase 0.56 HMPREF1078_RS09970 translation elongation factor 4 — —
Bacteroides thetaiotaomicron VPI-5482 0.33 BT0895 dihydrodipicolinate synthase (NCBI ptt file) 0.53 BT0632 GTP-binding protein, membrane GTPase lepA (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.33 BACOVA_02617 dihydrodipicolinate synthase 0.53 BACOVA_02258 GTP-binding protein LepA — —
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS00785 4-hydroxy-tetrahydrodipicolinate synthase 0.60 ABZR86_RS07165 translation elongation factor 4 — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.32 ABZR88_RS15585 4-hydroxy-tetrahydrodipicolinate synthase 0.56 ABZR88_RS09405 translation elongation factor 4 — —
Bacteroides stercoris CC31F 0.32 HMPREF1181_RS14165 4-hydroxy-tetrahydrodipicolinate synthase 0.55 HMPREF1181_RS16590 elongation factor 4 — —
Pedobacter sp. GW460-11-11-14-LB5 0.31 CA265_RS02050 4-hydroxy-tetrahydrodipicolinate synthase 0.56 CA265_RS08955 elongation factor 4 — —
Rhodanobacter denitrificans FW104-10B01 0.31 LRK54_RS15085 4-hydroxy-tetrahydrodipicolinate synthase 0.59 LRK54_RS16955 translation elongation factor 4 — —
Rhodanobacter denitrificans MT42 0.31 LRK55_RS14800 4-hydroxy-tetrahydrodipicolinate synthase 0.59 LRK55_RS16670 translation elongation factor 4 — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.30 Echvi_3959 dihydrodipicolinate synthase 0.55 Echvi_4645 GTP-binding protein LepA — —
Mycobacterium tuberculosis H37Rv 0.29 Rv2753c Probable dihydrodipicolinate synthase DapA (DHDPS) (dihydrodipicolinate synthetase) 0.54 Rv2404c Probable GTP-binding protein LepA (GTP-binding elongation factor) — —
Synechococcus elongatus PCC 7942 0.28 Synpcc7942_1847 dapA dihydrodipicolinate synthase 0.59 Synpcc7942_0479 lepA GTP-binding protein LepA — —
Lysobacter sp. OAE881 0.28 ABIE51_RS07995 4-hydroxy-tetrahydrodipicolinate synthase 0.59 ABIE51_RS13875 translation elongation factor 4 — —
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_03855 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.59 OKGIIK_07885 Elongation factor 4 — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_04485 4-hydroxy-tetrahydrodipicolinate synthase 0.55 CA264_07150 elongation factor 4 — —
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.3085.1 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.59 Xcc-8004.3676.1 Translation elongation factor LepA — —

Not shown: 2 genomes with orthologs for TX73_013920 only; 2 genomes with orthologs for TX73_001825 only