Conservation of cofitness between TX73_013920 and TX73_001705 in Rhodopseudomonas palustris CGA009

99 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_013920 4-hydroxy-tetrahydrodipicolinate synthase 1.0 TX73_001705 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 0.62 2
Bosea sp. OAE506 0.76 ABIE41_RS19960 4-hydroxy-tetrahydrodipicolinate synthase 0.58 ABIE41_RS03300 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
Dinoroseobacter shibae DFL-12 0.60 Dshi_0149 dihydrodipicolinate synthase (RefSeq) 0.43 Dshi_3462 Ham1 family protein (RefSeq)
Sinorhizobium meliloti 1021 0.60 SMc02404 dihydrodipicolinate synthase 0.58 SMc01146 deoxyribonucleotide triphosphate pyrophosphatase
Rhizobium sp. OAE497 0.60 ABIE40_RS06030 4-hydroxy-tetrahydrodipicolinate synthase 0.57 ABIE40_RS01630 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
Agrobacterium fabrum C58 0.60 Atu1024 dihydrodipicolinate synthase 0.59 Atu0326 putative deoxyribonucleotide triphosphate pyrophosphatase
Azospirillum sp. SherDot2 0.60 MPMX19_01219 4-hydroxy-tetrahydrodipicolinate synthase 0.48 MPMX19_02575 dITP/XTP pyrophosphatase
Rhodospirillum rubrum S1H 0.58 Rru_A1865 Dihydrodipicolinate synthase subfamily (NCBI) 0.54 Rru_A3640 Ham1-like protein (NCBI) low > 58
Azospirillum brasilense Sp245 0.58 AZOBR_RS08420 dihydrodipicolinate synthase 0.47 AZOBR_RS02200 nucleoside-triphosphate diphosphatase
Magnetospirillum magneticum AMB-1 0.57 AMB_RS12805 4-hydroxy-tetrahydrodipicolinate synthase 0.55 AMB_RS22765 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family
Caulobacter crescentus NA1000 0.56 CCNA_01253 dihydrodipicolinate synthase 0.49 CCNA_00145 xanthosine triphosphate pyrophosphatase
Caulobacter crescentus NA1000 Δfur 0.56 CCNA_01253 dihydrodipicolinate synthase 0.49 CCNA_00145 xanthosine triphosphate pyrophosphatase
Phaeobacter inhibens DSM 17395 0.55 PGA1_c28930 dihydrodipicolinate synthase DapA 0.49 PGA1_c35040 nucleoside-triphosphatase RdgB
Desulfovibrio vulgaris Miyazaki F 0.49 DvMF_0562 dihydrodipicolinate synthase (RefSeq) 0.26 DvMF_1699 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family (RefSeq)
Desulfovibrio vulgaris Hildenborough JW710 0.48 DVU1868 dapA dihydrodipicolinate synthase (TIGR) 0.27 DVU3154 HAM1 family protein (TIGR)
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS07275 4-hydroxy-tetrahydrodipicolinate synthase 0.26 PFLU_RS28400 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase low > 109
Pseudomonas fluorescens SBW25 0.43 PFLU_RS07275 4-hydroxy-tetrahydrodipicolinate synthase 0.26 PFLU_RS28400 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase low > 109
Pseudomonas sp. RS175 0.43 PFR28_00699 4-hydroxy-tetrahydrodipicolinate synthase 0.27 PFR28_04248 dITP/XTP pyrophosphatase
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_2747 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.27 Pf6N2E2_4594 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_04530 4-hydroxy-tetrahydrodipicolinate synthase 0.27 AO356_13395 non-canonical purine NTP pyrophosphatase
Variovorax sp. OAS795 0.43 ABID97_RS20125 4-hydroxy-tetrahydrodipicolinate synthase 0.22 ABID97_RS23635 non-canonical purine NTP pyrophosphatase low > 91
Ralstonia solanacearum UW163 0.43 UW163_RS12360 4-hydroxy-tetrahydrodipicolinate synthase 0.30 UW163_RS10370 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_4507 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.25 PfGW456L13_1004 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) low > 87
Ralstonia solanacearum GMI1000 0.43 RS_RS05700 4-hydroxy-tetrahydrodipicolinate synthase 0.29 RS_RS10835 non-canonical purine NTP pyrophosphatase low > 80
Dechlorosoma suillum PS 0.43 Dsui_1977 dihydrodipicolinate synthase 0.27 Dsui_0492 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS14890 4-hydroxy-tetrahydrodipicolinate synthase 0.30 RALBFv3_RS03350 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_1548 dihydrodipicolinate synthase 0.28 Psyr_0472 Ham1-like protein
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_1548 dihydrodipicolinate synthase 0.28 Psyr_0472 Ham1-like protein
Pseudomonas simiae WCS417 0.43 PS417_07165 dihydrodipicolinate synthase 0.26 PS417_26755 nucleoside-triphosphate diphosphatase low > 88
Variovorax sp. SCN45 0.43 GFF2740 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.23 GFF2382 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.66) low > 127
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_3332 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.25 Pf1N1B4_2335 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)
Ralstonia solanacearum PSI07 0.43 RPSI07_RS18470 4-hydroxy-tetrahydrodipicolinate synthase 0.30 RPSI07_RS13835 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family
Brevundimonas sp. GW460-12-10-14-LB2 0.43 A4249_RS05475 4-hydroxy-tetrahydrodipicolinate synthase 0.43 A4249_RS12440 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS10545 4-hydroxy-tetrahydrodipicolinate synthase 0.29 ABZR87_RS15260 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
Klebsiella michiganensis M5al 0.42 BWI76_RS20905 4-hydroxy-tetrahydrodipicolinate synthase 0.29 BWI76_RS24115 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS05940 4-hydroxy-tetrahydrodipicolinate synthase 0.25 QEN71_RS03640 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_17670 4-hydroxy-tetrahydrodipicolinate synthase 0.26 AO353_08195 non-canonical purine NTP pyrophosphatase
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS06250 dihydrodipicolinate synthase 0.30 RR42_RS04885 nucleoside-triphosphate diphosphatase low > 128
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS16395 dihydrodipicolinate synthase 0.26 HSERO_RS10660 nucleoside-triphosphate diphosphatase
Enterobacter asburiae PDN3 0.41 EX28DRAFT_0182 4-hydroxy-tetrahydrodipicolinate synthase 0.29 EX28DRAFT_2992 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family
Acinetobacter radioresistens SK82 0.41 MPMX26_02982 4-hydroxy-tetrahydrodipicolinate synthase 0.24 MPMX26_00400 dITP/XTP pyrophosphatase
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS12615 dihydrodipicolinate synthase 0.25 BPHYT_RS15330 nucleoside-triphosphate diphosphatase low > 109
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF2180 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.28 GFF3057 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)
Kangiella aquimarina DSM 16071 0.41 B158DRAFT_2444 dihydrodipicolinate synthase 0.25 B158DRAFT_0200 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family
Pseudomonas stutzeri RCH2 0.41 Psest_1515 dihydrodipicolinate synthase 0.27 Psest_0277 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family
Enterobacter sp. TBS_079 0.41 MPMX20_03340 4-hydroxy-tetrahydrodipicolinate synthase 0.28 MPMX20_03812 dITP/XTP pyrophosphatase
Sphingomonas koreensis DSMZ 15582 0.41 Ga0059261_0213 4-hydroxy-tetrahydrodipicolinate synthase 0.55 Ga0059261_2742 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_00509 dihydrodipicolinate synthase 0.26 H281DRAFT_04009 XTP/dITP diphosphohydrolase
Pseudomonas sp. S08-1 0.41 OH686_19215 4-hydroxy-tetrahydrodipicolinate synthase 0.28 OH686_11015 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family
Paraburkholderia graminis OAS925 0.40 ABIE53_002749 4-hydroxy-tetrahydrodipicolinate synthase 0.25 ABIE53_003235 XTP/dITP diphosphohydrolase
Erwinia tracheiphila SCR3 0.40 LU632_RS08325 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.27 LU632_RS05450 XTP/dITP diphosphatase
Escherichia coli BL21 0.40 ECD_02370 dihydrodipicolinate synthase 0.29 ECD_02784 dITP/XTP pyrophosphatase
Escherichia coli ECRC62 0.40 BNILDI_12385 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.29 BNILDI_09690 rdgB XTP/dITP diphosphatase
Escherichia coli ECOR27 0.40 NOLOHH_13575 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.29 NOLOHH_11110 rdgB XTP/dITP diphosphatase
Escherichia coli ECRC101 0.40 MCAODC_12445 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.29 MCAODC_09760 rdgB XTP/dITP diphosphatase
Escherichia coli ECRC100 0.40 OKFHMN_21915 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.29 OKFHMN_19240 rdgB XTP/dITP diphosphatase
Escherichia coli ECRC102 0.40 NIAGMN_19685 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.29 NIAGMN_17005 rdgB XTP/dITP diphosphatase
Escherichia coli ECRC98 0.40 JDDGAC_25860 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.29 JDDGAC_22870 rdgB XTP/dITP diphosphatase
Escherichia coli Nissle 1917 0.40 ECOLIN_RS14145 4-hydroxy-tetrahydrodipicolinate synthase 0.29 ECOLIN_RS16430 XTP/dITP diphosphatase
Escherichia fergusonii Becca 0.40 EFB2_01408 4-hydroxy-tetrahydrodipicolinate synthase 0.29 EFB2_00948 dITP/XTP pyrophosphatase
Escherichia coli BW25113 0.40 b2478 dapA dihydrodipicolinate synthase (NCBI) 0.29 b2954 yggV putative deoxyribonucleotide triphosphate pyrophosphatase (NCBI)
Pantoea sp. MT58 0.40 IAI47_05265 4-hydroxy-tetrahydrodipicolinate synthase 0.31 IAI47_03585 XTP/dITP diphosphatase
Escherichia coli ECOR38 0.40 HEPCGN_21085 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.30 HEPCGN_18545 rdgB XTP/dITP diphosphatase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF5565 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.25 GFF3255 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)
Escherichia coli ECRC99 0.40 KEDOAH_06305 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.29 KEDOAH_08900 rdgB XTP/dITP diphosphatase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_01251 4-hydroxy-tetrahydrodipicolinate synthase 0.29 OHPLBJKB_00762 dITP/XTP pyrophosphatase
Dickeya dadantii 3937 0.40 DDA3937_RS06065 4-hydroxy-tetrahydrodipicolinate synthase 0.28 DDA3937_RS17320 XTP/dITP diphosphatase
Dickeya dianthicola 67-19 0.40 HGI48_RS06110 4-hydroxy-tetrahydrodipicolinate synthase 0.28 HGI48_RS17365 XTP/dITP diphosphatase
Pseudomonas putida KT2440 0.40 PP_1237 4-hydroxy-tetrahydrodipicolinate synthase 0.27 PP_5100 dITP/XTP pyrophosphatase low > 96
Rahnella sp. WP5 0.40 EX31_RS22740 4-hydroxy-tetrahydrodipicolinate synthase 0.27 EX31_RS02705 XTP/dITP diphosphatase low > 89
Pectobacterium carotovorum WPP14 0.40 HER17_RS15415 4-hydroxy-tetrahydrodipicolinate synthase 0.27 HER17_RS03790 XTP/dITP diphosphatase
Castellaniella sp019104865 MT123 0.39 ABCV34_RS15825 4-hydroxy-tetrahydrodipicolinate synthase 0.25 ABCV34_RS03520 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
Acidovorax sp. GW101-3H11 0.39 Ac3H11_277 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.23 Ac3H11_3671 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) low > 79
Serratia liquefaciens MT49 0.39 IAI46_18780 4-hydroxy-tetrahydrodipicolinate synthase 0.28 IAI46_21430 XTP/dITP diphosphatase low > 86
Dickeya dianthicola ME23 0.39 DZA65_RS06460 4-hydroxy-tetrahydrodipicolinate synthase 0.29 DZA65_RS18455 XTP/dITP diphosphatase
Marinobacter adhaerens HP15 0.39 HP15_2027 dihydrodipicolinate synthase 0.30 HP15_281 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family
Alteromonas macleodii MIT1002 0.38 MIT1002_02207 4-hydroxy-tetrahydrodipicolinate synthase 0.29 MIT1002_00940 dITP/XTP pyrophosphatase
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_10755 4-hydroxy-tetrahydrodipicolinate synthase 0.28 CSW01_02430 non-canonical purine NTP pyrophosphatase
Shewanella loihica PV-4 0.36 Shew_1848 dihydrodipicolinate synthase (RefSeq) 0.29 Shew_1132 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase (RefSeq)
Shewanella amazonensis SB2B 0.36 Sama_1908 dihydrodipicolinate synthase (RefSeq) 0.27 Sama_2482 Ham1-like protein (RefSeq)
Shewanella oneidensis MR-1 0.35 SO1879 dapA dihydrodipicolinate synthase (NCBI ptt file) 0.30 SO3358 HAM1 protein (NCBI ptt file)
Shewanella sp. ANA-3 0.35 Shewana3_1656 dihydrodipicolinate synthase (RefSeq) 0.31 Shewana3_1189 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase (RefSeq)
Phocaeicola dorei CL03T12C01 0.34 ABI39_RS17235 4-hydroxy-tetrahydrodipicolinate synthase 0.31 ABI39_RS05750 non-canonical purine NTP diphosphatase
Phocaeicola vulgatus CL09T03C04 0.34 HMPREF1058_RS03990 4-hydroxy-tetrahydrodipicolinate synthase 0.31 HMPREF1058_RS11235 non-canonical purine NTP diphosphatase
Parabacteroides merdae CL09T00C40 0.34 HMPREF1078_RS01735 4-hydroxy-tetrahydrodipicolinate synthase 0.27 HMPREF1078_RS06565 non-canonical purine NTP diphosphatase
Bacteroides thetaiotaomicron VPI-5482 0.33 BT0895 dihydrodipicolinate synthase (NCBI ptt file) 0.28 BT3128 putative xanthosine triphosphate pyrophosphatase (NCBI ptt file)
Bacteroides ovatus ATCC 8483 0.33 BACOVA_02617 dihydrodipicolinate synthase 0.29 BACOVA_02837 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS00785 4-hydroxy-tetrahydrodipicolinate synthase 0.30 ABZR86_RS11905 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.32 ABZR88_RS15585 4-hydroxy-tetrahydrodipicolinate synthase 0.26 ABZR88_RS21980 non-canonical purine NTP diphosphatase
Bacteroides stercoris CC31F 0.32 HMPREF1181_RS14165 4-hydroxy-tetrahydrodipicolinate synthase 0.29 HMPREF1181_RS01925 non-canonical purine NTP diphosphatase
Pedobacter sp. GW460-11-11-14-LB5 0.31 CA265_RS02050 4-hydroxy-tetrahydrodipicolinate synthase 0.26 CA265_RS24990 non-canonical purine NTP pyrophosphatase
Rhodanobacter denitrificans MT42 0.31 LRK55_RS14800 4-hydroxy-tetrahydrodipicolinate synthase 0.34 LRK55_RS11465 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
Rhodanobacter denitrificans FW104-10B01 0.31 LRK54_RS15085 4-hydroxy-tetrahydrodipicolinate synthase 0.34 LRK54_RS11740 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
Echinicola vietnamensis KMM 6221, DSM 17526 0.30 Echvi_3959 dihydrodipicolinate synthase 0.26 Echvi_1180 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family
Mycobacterium tuberculosis H37Rv 0.29 Rv2753c Probable dihydrodipicolinate synthase DapA (DHDPS) (dihydrodipicolinate synthetase) 0.25 Rv1341 Conserved protein
Synechococcus elongatus PCC 7942 0.28 Synpcc7942_1847 dapA dihydrodipicolinate synthase 0.30 Synpcc7942_1266 rdgB Ham1-like protein
Lysobacter sp. OAE881 0.28 ABIE51_RS07995 4-hydroxy-tetrahydrodipicolinate synthase 0.32 ABIE51_RS17295 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_03855 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.31 OKGIIK_12155 rdgB RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_04485 4-hydroxy-tetrahydrodipicolinate synthase 0.28 CA264_19890 non-canonical purine NTP pyrophosphatase
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.3085.1 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.31 Xcc-8004.1223.1 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)

Not shown: 2 genomes with orthologs for TX73_013920 only; 1 genomes with orthologs for TX73_001705 only