Conservation of cofitness between PP_0363 and PP_0293 in Pseudomonas putida KT2440

99 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0363 8-amino-7-oxononanoate synthase 1.0 PP_0293 Imidazole glycerol phosphate synthase subunit HisF 0.53 11
Pseudomonas syringae pv. syringae B728a 0.84 Psyr_4686 8-amino-7-oxononanoate synthase 0.97 Psyr_4893 imidazole glycerol phosphate synthase subunit hisF low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.84 Psyr_4686 8-amino-7-oxononanoate synthase 0.97 Psyr_4893 imidazole glycerol phosphate synthase subunit hisF
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_1148 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.97 PfGW456L13_358 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.69 54
Pseudomonas sp. RS175 0.84 PFR28_04102 8-amino-7-oxononanoate synthase 0.98 PFR28_04933 Imidazole glycerol phosphate synthase subunit HisF low > 88
Pseudomonas fluorescens FW300-N2E3 0.83 AO353_07520 8-amino-7-oxononanoate synthase 0.97 AO353_12090 imidazole glycerol phosphate synthase subunit HisF 0.54 69
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_4761 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.98 Pf6N2E2_3838 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_2488 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.98 Pf1N1B4_1623 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)
Pseudomonas fluorescens SBW25-INTG 0.82 PFLU_RS27645 8-amino-7-oxononanoate synthase 0.98 PFLU_RS01625 imidazole glycerol phosphate synthase subunit HisF low > 109
Pseudomonas fluorescens SBW25 0.82 PFLU_RS27645 8-amino-7-oxononanoate synthase 0.98 PFLU_RS01625 imidazole glycerol phosphate synthase subunit HisF low > 109
Pseudomonas simiae WCS417 0.82 PS417_26000 8-amino-7-oxononanoate synthase 0.97 PS417_01580 imidazole glycerol phosphate synthase low > 88
Pseudomonas stutzeri RCH2 0.82 Psest_0412 8-amino-7-oxononanoate synthase 0.92 Psest_0156 imidazoleglycerol phosphate synthase, cyclase subunit
Pseudomonas sp. S08-1 0.81 OH686_10350 8-amino-7-oxononanoate synthase 0.92 OH686_14595 Imidazole glycerol phosphate synthase cyclase subunit low > 80
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_14140 8-amino-7-oxononanoate synthase 0.98 AO356_09795 imidazole glycerol phosphate synthase subunit HisF 0.36 70
Marinobacter adhaerens HP15 0.56 HP15_2485 8-amino-7-oxononanoate synthase 0.82 HP15_3009 protein containing histidine biosynthesis, HisF domain
Dechlorosoma suillum PS 0.49 Dsui_2881 8-amino-7-oxononanoate synthase 0.72 Dsui_1418 imidazoleglycerol phosphate synthase, cyclase subunit
Kangiella aquimarina DSM 16071 0.48 B158DRAFT_0865 8-amino-7-oxononanoate synthase 0.46 B158DRAFT_2291 imidazoleglycerol phosphate synthase, cyclase subunit
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS15835 8-amino-7-oxononanoate synthase 0.39 ABZR86_RS06705 imidazole glycerol phosphate synthase subunit HisF 0.46 28
Rhodanobacter denitrificans MT42 0.46 LRK55_RS09895 8-amino-7-oxononanoate synthase 0.38 LRK55_RS01360 imidazole glycerol phosphate synthase subunit HisF low > 63
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS10255 8-amino-7-oxononanoate synthase 0.39 LRK54_RS01580 imidazole glycerol phosphate synthase subunit HisF low > 59
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_13655 bioF 8-amino-7-oxononanoate synthase 0.37 OKGIIK_04975 hisF imidazole glycerol phosphate synthase subunit HisF low > 52
Lysobacter sp. OAE881 0.42 ABIE51_RS01145 8-amino-7-oxononanoate synthase 0.43 ABIE51_RS13300 imidazole glycerol phosphate synthase subunit HisF low > 62
Enterobacter sp. TBS_079 0.42 MPMX20_01404 8-amino-7-oxononanoate synthase 0.41 MPMX20_03007 Imidazole glycerol phosphate synthase subunit HisF low > 85
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.504.1 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.43 Xcc-8004.2943.1 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) low > 74
Enterobacter asburiae PDN3 0.40 EX28DRAFT_2215 8-amino-7-oxononanoate synthase 0.41 EX28DRAFT_0534 imidazoleglycerol phosphate synthase, cyclase subunit low > 76
Dickeya dianthicola 67-19 0.40 HGI48_RS08680 8-amino-7-oxononanoate synthase 0.41 HGI48_RS09720 imidazole glycerol phosphate synthase subunit HisF
Dickeya dianthicola ME23 0.40 DZA65_RS08970 8-amino-7-oxononanoate synthase 0.41 DZA65_RS10030 imidazole glycerol phosphate synthase subunit HisF low > 75
Dickeya dadantii 3937 0.40 DDA3937_RS08515 8-amino-7-oxononanoate synthase 0.41 DDA3937_RS09710 imidazole glycerol phosphate synthase subunit HisF 0.46 61
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS12245 8-amino-7-oxononanoate synthase 0.72 HSERO_RS20315 imidazole glycerol phosphate synthase low > 78
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF672 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.41 GFF3907 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) low > 78
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_05650 8-amino-7-oxononanoate synthase 0.42 CSW01_05775 imidazole glycerol phosphate synthase cyclase subunit low > 62
Pectobacterium carotovorum WPP14 0.38 HER17_RS13455 8-amino-7-oxononanoate synthase 0.43 HER17_RS12255 imidazole glycerol phosphate synthase subunit HisF low > 75
Erwinia tracheiphila SCR3 0.38 LU632_RS09135 bioF 8-amino-7-oxononanoate synthase 0.41 LU632_RS08920 hisF imidazole glycerol phosphate synthase subunit HisF
Rahnella sp. WP5 0.37 EX31_RS23700 8-amino-7-oxononanoate synthase 0.42 EX31_RS11465 imidazole glycerol phosphate synthase subunit HisF low > 89
Paraburkholderia graminis OAS925 0.37 ABIE53_000579 8-amino-7-oxononanoate synthase 0.77 ABIE53_003695 cyclase
Escherichia coli Nissle 1917 0.37 ECOLIN_RS04135 8-amino-7-oxononanoate synthase 0.42 ECOLIN_RS11970 imidazole glycerol phosphate synthase subunit HisF
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_02095 8-amino-7-oxononanoate synthase 0.77 H281DRAFT_05659 imidazole glycerol phosphate synthase subunit hisF
Escherichia fergusonii Becca 0.37 EFB2_03329 8-amino-7-oxononanoate synthase 0.42 EFB2_01831 Imidazole glycerol phosphate synthase subunit HisF low > 86
Escherichia coli ECRC101 0.37 MCAODC_25610 bioF 8-amino-7-oxononanoate synthase 0.42 MCAODC_20450 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli ECRC98 0.37 JDDGAC_10030 bioF 8-amino-7-oxononanoate synthase 0.42 JDDGAC_28600 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli ECRC102 0.37 NIAGMN_04440 bioF 8-amino-7-oxononanoate synthase 0.42 NIAGMN_22435 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli ECRC101 0.37 OKFHMN_06395 bioF 8-amino-7-oxononanoate synthase 0.42 OKFHMN_24490 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli ECRC62 0.37 BNILDI_21035 bioF 8-amino-7-oxononanoate synthase 0.42 BNILDI_14715 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli ECRC99 0.37 KEDOAH_21515 bioF 8-amino-7-oxononanoate synthase 0.42 KEDOAH_03660 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli BW25113 0.36 b0776 bioF 8-amino-7-oxononanoate synthase (NCBI) 0.42 b2025 hisF imidazole glycerol phosphate synthase subunit HisF (NCBI) low > 76
Escherichia coli BL21 0.36 ECD_00743 8-amino-7-oxononanoate synthase 0.41 ECD_01927 imidazole glycerol phosphate synthase, catalytic subunit with HisH
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_02937 8-amino-7-oxononanoate synthase 0.42 OHPLBJKB_01675 Imidazole glycerol phosphate synthase subunit HisF low > 73
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF3995 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.69 GFF1309 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS02160 8-amino-7-oxononanoate synthase 0.77 BPHYT_RS17680 imidazole glycerol phosphate synthase subunit HisF low > 109
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS01095 8-amino-7-oxononanoate synthase 0.76 QEN71_RS27835 imidazole glycerol phosphate synthase subunit HisF
Escherichia coli ECOR27 0.36 NOLOHH_22765 bioF 8-amino-7-oxononanoate synthase 0.42 NOLOHH_15805 hisF Imidazole glycerol phosphate synthase subunit HisF low > 57
Escherichia coli ECOR38 0.36 HEPCGN_01645 bioF 8-amino-7-oxononanoate synthase 0.42 HEPCGN_03195 hisF Imidazole glycerol phosphate synthase subunit HisF low > 85
Serratia liquefaciens MT49 0.36 IAI46_06530 8-amino-7-oxononanoate synthase 0.41 IAI46_08185 imidazole glycerol phosphate synthase subunit HisF low > 86
Alteromonas macleodii MIT1002 0.36 MIT1002_01380 8-amino-7-oxononanoate synthase 0.40 MIT1002_02638 Imidazole glycerol phosphate synthase subunit HisF low > 70
Acidovorax sp. GW101-3H11 0.36 Ac3H11_3830 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.63 Ac3H11_4733 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)
Ralstonia solanacearum UW163 0.35 UW163_RS14155 8-amino-7-oxononanoate synthase 0.76 UW163_RS06800 imidazole glycerol phosphate synthase subunit HisF
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS00820 8-amino-7-oxononanoate synthase 0.76 RALBFv3_RS06815 imidazole glycerol phosphate synthase subunit HisF
Shewanella oneidensis MR-1 0.35 SO2739 bioF 8-amino-7-oxononanoate synthase (NCBI ptt file) 0.39 SO2068 hisF hisF protein (cyclase) (NCBI ptt file) low > 76
Ralstonia solanacearum GMI1000 0.35 RS_RS07435 8-amino-7-oxononanoate synthase 0.76 RS_RS14760 imidazole glycerol phosphate synthase subunit HisF
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS00930 8-amino-7-oxononanoate synthase 0.75 RR42_RS18885 imidazole glycerol phosphate synthase
Variovorax sp. OAS795 0.35 ABID97_RS16260 8-amino-7-oxononanoate synthase 0.69 ABID97_RS23105 imidazole glycerol phosphate synthase subunit HisF
Klebsiella michiganensis M5al 0.35 BWI76_RS08765 8-amino-7-oxononanoate synthase 0.40 BWI76_RS18950 imidazole glycerol phosphate synthase cyclase subunit low > 92
Ralstonia solanacearum PSI07 0.35 RPSI07_RS16700 8-amino-7-oxononanoate synthase 0.76 RPSI07_RS10420 imidazole glycerol phosphate synthase subunit HisF
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS12340 8-amino-7-oxononanoate synthase 0.75 ABZR87_RS02470 imidazole glycerol phosphate synthase subunit HisF
Shewanella loihica PV-4 0.35 Shew_1720 8-amino-7-oxononanoate synthase (RefSeq) 0.36 Shew_2203 imidazole glycerol phosphate synthase subunit HisF (RefSeq)
Pontibacter actiniarum KMM 6156, DSM 19842 0.34 CA264_07040 8-amino-7-oxononanoate synthase 0.54 CA264_05110 imidazole glycerol phosphate synthase cyclase subunit low > 74
Shewanella sp. ANA-3 0.34 Shewana3_2518 aminotransferase, class I and II (RefSeq) 0.39 Shewana3_1848 imidazole glycerol phosphate synthase subunit HisF (RefSeq)
Mucilaginibacter yixingensis YX-36 DSM 26809 0.34 ABZR88_RS03035 pyridoxal phosphate-dependent aminotransferase family protein 0.48 ABZR88_RS06855 imidazole glycerol phosphate synthase subunit HisF
Pantoea sp. MT58 0.33 IAI47_13525 8-amino-7-oxononanoate synthase 0.42 IAI47_07065 imidazole glycerol phosphate synthase subunit HisF low > 76
Phocaeicola vulgatus CL09T03C04 0.33 HMPREF1058_RS01195 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.52 HMPREF1058_RS06175 imidazole glycerol phosphate synthase subunit HisF
Phocaeicola dorei CL03T12C01 0.33 ABI39_RS16535 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.52 ABI39_RS19930 imidazole glycerol phosphate synthase subunit HisF
Variovorax sp. SCN45 0.32 GFF144 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.68 GFF5357 Imidazole glycerol phosphate synthase cyclase subunit
Rhizobium sp. OAE497 0.32 ABIE40_RS12730 glycine C-acetyltransferase 0.63 ABIE40_RS19440 imidazole glycerol phosphate synthase subunit HisF low > 107
Sinorhizobium meliloti 1021 0.32 SMc01565 2-amino-3-ketobutyrate CoA ligase 0.67 SMc02569 imidazole glycerol phosphate synthase subunit HisF low > 103
Shewanella amazonensis SB2B 0.32 Sama_0098 2-amino-3-ketobutyrate coenzyme A ligase (RefSeq) 0.38 Sama_1947 imidazole glycerol phosphate synthase subunit HisF (RefSeq) low > 62
Parabacteroides merdae CL09T00C40 0.32 HMPREF1078_RS16170 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.49 HMPREF1078_RS13565 imidazole glycerol phosphate synthase subunit HisF
Methanococcus maripaludis S2 0.31 MMP_RS08100 8-amino-7-oxononanoate synthase 0.56 MMP_RS08865 imidazole glycerol phosphate synthase subunit HisF
Castellaniella sp019104865 MT123 0.31 ABCV34_RS15295 8-amino-7-oxononanoate synthase 0.73 ABCV34_RS11250 imidazole glycerol phosphate synthase subunit HisF low > 48
Bacteroides stercoris CC31F 0.30 HMPREF1181_RS14215 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.51 HMPREF1181_RS11070 imidazole glycerol phosphate synthase subunit HisF
Echinicola vietnamensis KMM 6221, DSM 17526 0.30 Echvi_0145 2-amino-3-ketobutyrate coenzyme A ligase 0.52 Echvi_2516 imidazoleglycerol phosphate synthase, cyclase subunit low > 79
Methanococcus maripaludis JJ 0.30 MMJJ_RS06265 8-amino-7-oxononanoate synthase 0.57 MMJJ_RS05490 imidazole glycerol phosphate synthase subunit HisF low > 28
Phaeobacter inhibens DSM 17395 0.30 PGA1_c34330 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) (from data) 0.61 PGA1_c09240 imidazole glycerol phosphate synthase subunit HisF
Synechococcus elongatus PCC 7942 0.30 Synpcc7942_0027 bioF 8-amino-7-oxononanoate synthase 0.53 Synpcc7942_2087 hisF imidazole glycerol phosphate synthase subunit HisF
Azospirillum brasilense Sp245 0.30 AZOBR_RS31105 8-amino-7-oxononanoate synthase 0.69 AZOBR_RS01685 imidazole glycerol phosphate synthase low > 97
Bacteroides ovatus ATCC 8483 0.29 BACOVA_02588 putative 8-amino-7-oxononanoate synthase 0.52 BACOVA_00219 imidazoleglycerol phosphate synthase, cyclase subunit
Bacteroides thetaiotaomicron VPI-5482 0.29 BT1371 2-amino-3-ketobutyrate coenzyme A ligase (NCBI ptt file) 0.51 BT1378 imidazole glycerol phosphate synthase subunit hisF (NCBI ptt file) low > 81
Caulobacter crescentus NA1000 0.28 CCNA_01647 8-amino-7-oxononanoate synthase 0.58 CCNA_03853 imidazole glycerol phosphate synthase, cyclase subunit low > 66
Caulobacter crescentus NA1000 Δfur 0.28 CCNA_01647 8-amino-7-oxononanoate synthase 0.58 CCNA_03853 imidazole glycerol phosphate synthase, cyclase subunit low > 67
Magnetospirillum magneticum AMB-1 0.28 AMB_RS13875 8-amino-7-oxononanoate synthase 0.66 AMB_RS22925 imidazole glycerol phosphate synthase cyclase subunit
Brevundimonas sp. GW460-12-10-14-LB2 0.28 A4249_RS02505 glycine C-acetyltransferase 0.40 A4249_RS10715 imidazole glycerol phosphate synthase subunit HisF 0.95 38
Rhodopseudomonas palustris CGA009 0.28 TX73_007985 5-aminolevulinate synthase 0.62 TX73_001625 imidazole glycerol phosphate synthase subunit HisF
Dinoroseobacter shibae DFL-12 0.27 Dshi_3546 5-aminolevulinic acid synthase (RefSeq) 0.64 Dshi_2576 imidazoleglycerol phosphate synthase, cyclase subunit (RefSeq)
Sphingomonas koreensis DSMZ 15582 0.27 Ga0059261_3508 7-keto-8-aminopelargonate synthetase and related enzymes 0.60 Ga0059261_1048 imidazoleglycerol phosphate synthase, cyclase subunit
Bosea sp. OAE506 0.27 ABIE41_RS04425 5-aminolevulinate synthase 0.61 ABIE41_RS03810 imidazole glycerol phosphate synthase subunit HisF
Azospirillum sp. SherDot2 0.27 MPMX19_02203 5-aminolevulinate synthase 0.68 MPMX19_02542 Imidazole glycerol phosphate synthase subunit HisF
Rhodospirillum rubrum S1H 0.26 Rru_A1146 5-aminolevulinic acid synthase (NCBI) 0.65 Rru_A3594 Histidine biosynthesis protein HisF (NCBI) low > 58
Acinetobacter radioresistens SK82 0.26 MPMX26_02453 8-amino-7-oxononanoate synthase 2 0.75 MPMX26_02854 Imidazole glycerol phosphate synthase subunit HisF low > 36
Agrobacterium fabrum C58 0.25 Atu2613 5-aminolevulinate synthase 0.64 Atu0039 imidazoleglycerol-phosphate synthase cyclase
Desulfovibrio vulgaris Hildenborough JW710 0.20 DVU2564 bioF 8-amino-7-oxononanoate synthase (Dmitry Rodionov) 0.53 DVU0286 hisF imidazoleglycerol phosphate synthase, cyclase subunit (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.18 DvMF_1008 aminotransferase class I and II (RefSeq) 0.55 DvMF_2304 imidazole glycerol phosphate synthase subunit HisF (RefSeq) low > 51

Not shown: 2 genomes with orthologs for PP_0363 only; 2 genomes with orthologs for PP_0293 only