Conservation of cofitness between HSERO_RS01815 and HSERO_RS20315 in Herbaspirillum seropedicae SmR1

98 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS01815 gamma-glutamyl kinase 1.0 HSERO_RS20315 imidazole glycerol phosphate synthase 0.83 17
Dechlorosoma suillum PS 0.71 Dsui_0166 glutamate 5-kinase 0.79 Dsui_1418 imidazoleglycerol phosphate synthase, cyclase subunit
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS27270 glutamate 5-kinase 0.87 QEN71_RS27835 imidazole glycerol phosphate synthase subunit HisF 0.94 18
Cupriavidus basilensis FW507-4G11 0.71 RR42_RS17940 gamma-glutamyl kinase 0.83 RR42_RS18885 imidazole glycerol phosphate synthase
Ralstonia solanacearum IBSBF1503 0.70 RALBFv3_RS06145 glutamate 5-kinase 0.82 RALBFv3_RS06815 imidazole glycerol phosphate synthase subunit HisF
Ralstonia solanacearum UW163 0.70 UW163_RS07480 glutamate 5-kinase 0.82 UW163_RS06800 imidazole glycerol phosphate synthase subunit HisF
Ralstonia sp. UNC404CL21Col 0.70 ABZR87_RS01810 glutamate 5-kinase 0.81 ABZR87_RS02470 imidazole glycerol phosphate synthase subunit HisF
Paraburkholderia graminis OAS925 0.70 ABIE53_003588 glutamate 5-kinase 0.86 ABIE53_003695 cyclase
Paraburkholderia bryophila 376MFSha3.1 0.70 H281DRAFT_06264 glutamate 5-kinase 0.87 H281DRAFT_05659 imidazole glycerol phosphate synthase subunit hisF
Burkholderia phytofirmans PsJN 0.69 BPHYT_RS17110 glutamate 5-kinase 0.86 BPHYT_RS17680 imidazole glycerol phosphate synthase subunit HisF
Ralstonia solanacearum PSI07 0.69 RPSI07_RS11095 glutamate 5-kinase 0.83 RPSI07_RS10420 imidazole glycerol phosphate synthase subunit HisF
Ralstonia solanacearum GMI1000 0.69 RS_RS14095 glutamate 5-kinase 0.83 RS_RS14760 imidazole glycerol phosphate synthase subunit HisF
Variovorax sp. OAS795 0.67 ABID97_RS23400 glutamate 5-kinase 0.77 ABID97_RS23105 imidazole glycerol phosphate synthase subunit HisF
Variovorax sp. SCN45 0.65 GFF2515 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.75 GFF5357 Imidazole glycerol phosphate synthase cyclase subunit
Acidovorax sp. GW101-3H11 0.65 Ac3H11_4771 Glutamate 5-kinase (EC 2.7.2.11) 0.69 Ac3H11_4733 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)
Castellaniella sp019104865 MT123 0.65 ABCV34_RS10800 glutamate 5-kinase 0.75 ABCV34_RS11250 imidazole glycerol phosphate synthase subunit HisF low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.63 GFF1274 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.76 GFF1309 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)
Pseudomonas fluorescens FW300-N1B4 0.61 Pf1N1B4_2800 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.75 Pf1N1B4_1623 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)
Pseudomonas fluorescens SBW25 0.60 PFLU_RS25360 glutamate 5-kinase 0.73 PFLU_RS01625 imidazole glycerol phosphate synthase subunit HisF low > 109
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS25360 glutamate 5-kinase 0.73 PFLU_RS01625 imidazole glycerol phosphate synthase subunit HisF 0.44 26
Pseudomonas simiae WCS417 0.60 PS417_23545 gamma-glutamyl kinase 0.74 PS417_01580 imidazole glycerol phosphate synthase 0.64 26
Pseudomonas sp. S08-1 0.59 OH686_16305 Glutamate 5-kinase / RNA-binding C-terminal domain PUA 0.73 OH686_14595 Imidazole glycerol phosphate synthase cyclase subunit low > 80
Pseudomonas sp. RS175 0.58 PFR28_03769 Glutamate 5-kinase 0.74 PFR28_04933 Imidazole glycerol phosphate synthase subunit HisF
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_15815 gamma-glutamyl kinase 0.74 AO356_09795 imidazole glycerol phosphate synthase subunit HisF 0.47 79
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_0704 glutamate 5-kinase 0.73 Psyr_4893 imidazole glycerol phosphate synthase subunit hisF
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_5103 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.74 Pf6N2E2_3838 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_0704 glutamate 5-kinase 0.73 Psyr_4893 imidazole glycerol phosphate synthase subunit hisF 0.74 35
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_1472 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.75 PfGW456L13_358 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.84 36
Pseudomonas putida KT2440 0.57 PP_0691 Glutamate 5-kinase 0.74 PP_0293 Imidazole glycerol phosphate synthase subunit HisF 0.27 75
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_14115 gamma-glutamyl kinase 0.74 AO353_12090 imidazole glycerol phosphate synthase subunit HisF 0.67 50
Pseudomonas stutzeri RCH2 0.57 Psest_3384 glutamate 5-kinase 0.74 Psest_0156 imidazoleglycerol phosphate synthase, cyclase subunit
Marinobacter adhaerens HP15 0.54 HP15_508 gamma-glutamyl kinase 0.76 HP15_3009 protein containing histidine biosynthesis, HisF domain
Acinetobacter radioresistens SK82 0.48 MPMX26_02135 Glutamate 5-kinase 0.73 MPMX26_02854 Imidazole glycerol phosphate synthase subunit HisF low > 36
Shewanella amazonensis SB2B 0.41 Sama_2516 gamma-glutamyl kinase (RefSeq) 0.39 Sama_1947 imidazole glycerol phosphate synthase subunit HisF (RefSeq) 0.93 30
Shewanella loihica PV-4 0.41 Shew_2848 gamma-glutamyl kinase (RefSeq) 0.37 Shew_2203 imidazole glycerol phosphate synthase subunit HisF (RefSeq) 0.97 25
Magnetospirillum magneticum AMB-1 0.40 AMB_RS20630 glutamate 5-kinase 0.67 AMB_RS22925 imidazole glycerol phosphate synthase cyclase subunit
Synechococcus elongatus PCC 7942 0.40 Synpcc7942_2197 proB gamma-glutamyl kinase 0.56 Synpcc7942_2087 hisF imidazole glycerol phosphate synthase subunit HisF
Azospirillum sp. SherDot2 0.40 MPMX19_01933 Glutamate 5-kinase 0.68 MPMX19_02542 Imidazole glycerol phosphate synthase subunit HisF
Klebsiella michiganensis M5al 0.40 BWI76_RS05840 glutamate 5-kinase 0.39 BWI76_RS18950 imidazole glycerol phosphate synthase cyclase subunit 0.85 35
Enterobacter asburiae PDN3 0.40 EX28DRAFT_2651 glutamate 5-kinase 0.40 EX28DRAFT_0534 imidazoleglycerol phosphate synthase, cyclase subunit 0.86 17
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF4114 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.40 GFF3907 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) low > 78
Escherichia coli ECRC62 0.39 BNILDI_00245 proB Glutamate 5-kinase 0.41 BNILDI_14715 hisF Imidazole glycerol phosphate synthase subunit HisF 0.93 44
Escherichia fergusonii Becca 0.39 EFB2_03778 Glutamate 5-kinase 0.41 EFB2_01831 Imidazole glycerol phosphate synthase subunit HisF low > 86
Escherichia coli BW25113 0.39 b0242 proB gamma-glutamyl kinase (NCBI) 0.41 b2025 hisF imidazole glycerol phosphate synthase subunit HisF (NCBI) 0.94 11
Escherichia coli ECRC100 0.39 OKFHMN_09675 proB Glutamate 5-kinase 0.41 OKFHMN_24490 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli BL21 0.39 ECD_00239 gamma-glutamate kinase 0.41 ECD_01927 imidazole glycerol phosphate synthase, catalytic subunit with HisH
Escherichia coli ECRC99 0.39 KEDOAH_18480 proB Glutamate 5-kinase 0.41 KEDOAH_03660 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli Nissle 1917 0.39 ECOLIN_RS01825 glutamate 5-kinase 0.41 ECOLIN_RS11970 imidazole glycerol phosphate synthase subunit HisF 0.86 22
Escherichia coli ECOR38 0.39 HEPCGN_07780 proB Glutamate 5-kinase 0.41 HEPCGN_03195 hisF Imidazole glycerol phosphate synthase subunit HisF 0.94 28
Enterobacter sp. TBS_079 0.39 MPMX20_00927 Glutamate 5-kinase 0.41 MPMX20_03007 Imidazole glycerol phosphate synthase subunit HisF 0.93 13
Escherichia coli ECRC102 0.39 NIAGMN_07535 proB Glutamate 5-kinase 0.41 NIAGMN_22435 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli ECRC98 0.39 JDDGAC_13300 proB Glutamate 5-kinase 0.41 JDDGAC_28600 hisF Imidazole glycerol phosphate synthase subunit HisF 0.75 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_03398 Glutamate 5-kinase 0.41 OHPLBJKB_01675 Imidazole glycerol phosphate synthase subunit HisF low > 73
Escherichia coli ECOR27 0.39 NOLOHH_02050 proB Glutamate 5-kinase 0.41 NOLOHH_15805 hisF Imidazole glycerol phosphate synthase subunit HisF 0.91 48
Escherichia coli ECRC101 0.39 MCAODC_00195 proB Glutamate 5-kinase 0.41 MCAODC_20450 hisF Imidazole glycerol phosphate synthase subunit HisF 0.79 54
Rahnella sp. WP5 0.39 EX31_RS20980 glutamate 5-kinase 0.42 EX31_RS11465 imidazole glycerol phosphate synthase subunit HisF 0.97 16
Serratia liquefaciens MT49 0.38 IAI46_04430 glutamate 5-kinase 0.42 IAI46_08185 imidazole glycerol phosphate synthase subunit HisF low > 86
Pantoea sp. MT58 0.38 IAI47_15120 glutamate 5-kinase 0.42 IAI47_07065 imidazole glycerol phosphate synthase subunit HisF 0.91 17
Agrobacterium fabrum C58 0.38 Atu2780 gamma-glutamyl kinase 0.63 Atu0039 imidazoleglycerol-phosphate synthase cyclase
Sinorhizobium meliloti 1021 0.38 SMc03776 gamma-glutamyl kinase 0.64 SMc02569 imidazole glycerol phosphate synthase subunit HisF 0.83 46
Shewanella oneidensis MR-1 0.37 SO1121 proB glutamate 5-kinase (NCBI ptt file) 0.36 SO2068 hisF hisF protein (cyclase) (NCBI ptt file) 0.98 9
Azospirillum brasilense Sp245 0.37 AZOBR_RS04095 glutamate 5-kinase 0.68 AZOBR_RS01685 imidazole glycerol phosphate synthase
Desulfovibrio vulgaris Miyazaki F 0.37 DvMF_1377 gamma-glutamyl kinase (RefSeq) 0.54 DvMF_2304 imidazole glycerol phosphate synthase subunit HisF (RefSeq) 0.94 19
Rhizobium sp. OAE497 0.37 ABIE40_RS18920 glutamate 5-kinase 0.64 ABIE40_RS19440 imidazole glycerol phosphate synthase subunit HisF 0.91 12
Erwinia tracheiphila SCR3 0.37 LU632_RS01185 proB glutamate 5-kinase 0.40 LU632_RS08920 hisF imidazole glycerol phosphate synthase subunit HisF low > 74
Vibrio cholerae E7946 ATCC 55056 0.37 CSW01_11575 glutamate 5-kinase 0.43 CSW01_05775 imidazole glycerol phosphate synthase cyclase subunit low > 62
Phaeobacter inhibens DSM 17395 0.37 PGA1_c15510 glutamate 5-kinase ProB 0.63 PGA1_c09240 imidazole glycerol phosphate synthase subunit HisF
Dinoroseobacter shibae DFL-12 0.37 Dshi_1467 glutamate 5-kinase (RefSeq) 0.64 Dshi_2576 imidazoleglycerol phosphate synthase, cyclase subunit (RefSeq)
Shewanella sp. ANA-3 0.37 Shewana3_0954 gamma-glutamyl kinase (RefSeq) 0.36 Shewana3_1848 imidazole glycerol phosphate synthase subunit HisF (RefSeq) 0.94 17
Rhodospirillum rubrum S1H 0.37 Rru_A1239 Glutamate 5-kinase, ProB-related (NCBI) 0.65 Rru_A3594 Histidine biosynthesis protein HisF (NCBI) 0.73 13
Desulfovibrio vulgaris Hildenborough JW710 0.36 DVU0930 proB glutamate 5-kinase (TIGR) 0.53 DVU0286 hisF imidazoleglycerol phosphate synthase, cyclase subunit (TIGR) 0.85 22
Dickeya dadantii 3937 0.36 DDA3937_RS16535 glutamate 5-kinase 0.41 DDA3937_RS09710 imidazole glycerol phosphate synthase subunit HisF 0.74 27
Rhodopseudomonas palustris CGA009 0.36 TX73_000850 glutamate 5-kinase 0.61 TX73_001625 imidazole glycerol phosphate synthase subunit HisF
Dickeya dianthicola ME23 0.36 DZA65_RS17695 glutamate 5-kinase 0.42 DZA65_RS10030 imidazole glycerol phosphate synthase subunit HisF low > 75
Dickeya dianthicola 67-19 0.36 HGI48_RS16605 glutamate 5-kinase 0.42 HGI48_RS09720 imidazole glycerol phosphate synthase subunit HisF
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS02375 glutamate 5-kinase 0.41 LRK54_RS01580 imidazole glycerol phosphate synthase subunit HisF low > 59
Rhodanobacter denitrificans MT42 0.35 LRK55_RS02130 glutamate 5-kinase 0.41 LRK55_RS01360 imidazole glycerol phosphate synthase subunit HisF low > 63
Pectobacterium carotovorum WPP14 0.35 HER17_RS04700 glutamate 5-kinase 0.41 HER17_RS12255 imidazole glycerol phosphate synthase subunit HisF 0.93 1
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_00316 glutamate 5-kinase 0.62 CCNA_03853 imidazole glycerol phosphate synthase, cyclase subunit low > 67
Caulobacter crescentus NA1000 0.35 CCNA_00316 glutamate 5-kinase 0.62 CCNA_03853 imidazole glycerol phosphate synthase, cyclase subunit 0.92 12
Bosea sp. OAE506 0.35 ABIE41_RS07585 glutamate 5-kinase 0.62 ABIE41_RS03810 imidazole glycerol phosphate synthase subunit HisF
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_09420 proB glutamate 5-kinase 0.38 OKGIIK_04975 hisF imidazole glycerol phosphate synthase subunit HisF low > 52
Alteromonas macleodii MIT1002 0.33 MIT1002_04056 Glutamate 5-kinase 0.39 MIT1002_02638 Imidazole glycerol phosphate synthase subunit HisF low > 70
Lysobacter sp. OAE881 0.32 ABIE51_RS13370 glutamate 5-kinase 0.44 ABIE51_RS13300 imidazole glycerol phosphate synthase subunit HisF low > 62
Bifidobacterium breve UCC2003 0.32 BBR_RS19445 glutamate 5-kinase 0.56 BBR_RS16095 imidazole glycerol phosphate synthase subunit HisF low > 34
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.2326.1 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.45 Xcc-8004.2943.1 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.52 73
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS08685 glutamate 5-kinase 0.41 ABZR86_RS06705 imidazole glycerol phosphate synthase subunit HisF 0.89 9
Mucilaginibacter yixingensis YX-36 DSM 26809 0.29 ABZR88_RS22170 glutamate 5-kinase 0.52 ABZR88_RS06855 imidazole glycerol phosphate synthase subunit HisF 0.73 31
Echinicola vietnamensis KMM 6221, DSM 17526 0.29 Echvi_4033 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.52 Echvi_2516 imidazoleglycerol phosphate synthase, cyclase subunit 0.68 46
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS16125 glutamate 5-kinase 0.43 A4249_RS10715 imidazole glycerol phosphate synthase subunit HisF 0.99 22
Mycobacterium tuberculosis H37Rv 0.29 Rv2439c Probable glutamate 5-kinase protein ProB (gamma-glutamyl kinase) (GK) 0.55 Rv1605 Probable cyclase HisF
Phocaeicola vulgatus CL09T03C04 0.27 HMPREF1058_RS08650 glutamate 5-kinase 0.54 HMPREF1058_RS06175 imidazole glycerol phosphate synthase subunit HisF 0.93 16
Sphingomonas koreensis DSMZ 15582 0.27 Ga0059261_3512 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.61 Ga0059261_1048 imidazoleglycerol phosphate synthase, cyclase subunit 0.90 13
Pontibacter actiniarum KMM 6156, DSM 19842 0.27 CA264_07725 glutamate 5-kinase 0.55 CA264_05110 imidazole glycerol phosphate synthase cyclase subunit low > 74
Bacteroides thetaiotaomicron VPI-5482 0.27 BT3719 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.53 BT1378 imidazole glycerol phosphate synthase subunit hisF (NCBI ptt file) 0.84 34
Phocaeicola dorei CL03T12C01 0.26 ABI39_RS02880 glutamate 5-kinase 0.54 ABI39_RS19930 imidazole glycerol phosphate synthase subunit HisF 0.83 28
Parabacteroides merdae CL09T00C40 0.26 HMPREF1078_RS10650 glutamate 5-kinase 0.50 HMPREF1078_RS13565 imidazole glycerol phosphate synthase subunit HisF 0.95 35
Bacteroides ovatus ATCC 8483 0.26 BACOVA_03537 glutamate 5-kinase 0.53 BACOVA_00219 imidazoleglycerol phosphate synthase, cyclase subunit 0.93 34
Bacteroides stercoris CC31F 0.25 HMPREF1181_RS03325 glutamate 5-kinase 0.50 HMPREF1181_RS11070 imidazole glycerol phosphate synthase subunit HisF 0.96 8

Not shown: 1 genomes with orthologs for HSERO_RS01815 only; 3 genomes with orthologs for HSERO_RS20315 only