Conservation of cofitness between PS417_24745 and PS417_04420 in Pseudomonas simiae WCS417

99 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_24745 gamma-glutamyl phosphate reductase 1.0 PS417_04420 histidinol dehydrogenase 0.64 17
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS26675 glutamate-5-semialdehyde dehydrogenase 0.99 PFLU_RS04470 histidinol dehydrogenase — —
Pseudomonas fluorescens SBW25 0.99 PFLU_RS26675 glutamate-5-semialdehyde dehydrogenase 0.99 PFLU_RS04470 histidinol dehydrogenase — —
Pseudomonas sp. S08-1 0.85 OH686_09340 Gamma-glutamyl phosphate reductase 0.85 OH686_08470 Histidinol dehydrogenase 0.84 1
Pseudomonas stutzeri RCH2 0.84 Psest_0508 gamma-glutamyl phosphate reductase 0.86 Psest_3298 histidinol dehydrogenase 0.84 4
Pseudomonas syringae pv. syringae B728a 0.77 Psyr_4369 glutamate-5-semialdehyde dehydrogenase 0.92 Psyr_4133 histidinol dehydrogenase 0.82 20
Pseudomonas syringae pv. syringae B728a ΔmexB 0.77 Psyr_4369 glutamate-5-semialdehyde dehydrogenase 0.92 Psyr_4133 histidinol dehydrogenase 0.89 17
Pseudomonas fluorescens FW300-N2E3 0.76 AO353_06495 gamma-glutamyl phosphate reductase 0.94 AO353_05110 histidinol dehydrogenase 0.63 38
Pseudomonas fluorescens FW300-N2C3 0.75 AO356_15290 gamma-glutamyl phosphate reductase 0.94 AO356_06965 histidinol dehydrogenase low > 104
Pseudomonas sp. RS175 0.75 PFR28_03872 Gamma-glutamyl phosphate reductase 0.94 PFR28_00187 Histidinol dehydrogenase — —
Pseudomonas putida KT2440 0.74 PP_4811 Gamma-glutamyl phosphate reductase 0.91 PP_0966 Histidinol dehydrogenase low > 96
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_4993 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.94 Pf6N2E2_3252 Histidinol dehydrogenase (EC 1.1.1.23) low > 103
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_2688 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.95 Pf1N1B4_1066 Histidinol dehydrogenase (EC 1.1.1.23) — —
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_1356 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.95 PfGW456L13_5000 Histidinol dehydrogenase (EC 1.1.1.23) low > 87
Marinobacter adhaerens HP15 0.72 HP15_601 gamma-glutamyl phosphate reductase 0.70 HP15_2428 histidinol dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.69 ABZR87_RS01395 glutamate-5-semialdehyde dehydrogenase 0.61 ABZR87_RS02500 histidinol dehydrogenase — —
Ralstonia solanacearum PSI07 0.68 RPSI07_RS11475 glutamate-5-semialdehyde dehydrogenase 0.61 RPSI07_RS10390 histidinol dehydrogenase — —
Acinetobacter radioresistens SK82 0.68 MPMX26_00417 Gamma-glutamyl phosphate reductase 0.58 MPMX26_02587 Histidinol dehydrogenase 0.73 24
Ralstonia solanacearum UW163 0.68 UW163_RS07800 glutamate-5-semialdehyde dehydrogenase 0.61 UW163_RS06770 histidinol dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS05825 glutamate-5-semialdehyde dehydrogenase 0.61 RALBFv3_RS06845 histidinol dehydrogenase — —
Ralstonia solanacearum GMI1000 0.68 RS_RS13715 gamma-glutamyl-phosphate reductase 0.61 RS_RS14790 histidinol dehydrogenase — —
Dechlorosoma suillum PS 0.64 Dsui_1220 gamma-glutamyl phosphate reductase 0.63 Dsui_1411 histidinol dehydrogenase — —
Paraburkholderia sabiae LMG 24235 0.63 QEN71_RS26940 glutamate-5-semialdehyde dehydrogenase 0.62 QEN71_RS27865 histidinol dehydrogenase low > 153
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS17530 gamma-glutamyl phosphate reductase 0.65 RR42_RS18915 histidinol dehydrogenase — —
Paraburkholderia bryophila 376MFSha3.1 0.63 H281DRAFT_06324 glutamate-5-semialdehyde dehydrogenase 0.61 H281DRAFT_05652 histidinol dehydrogenase — —
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS16770 gamma-glutamyl phosphate reductase 0.61 BPHYT_RS17710 histidinol dehydrogenase — —
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS02965 gamma-glutamyl phosphate reductase 0.63 HSERO_RS20345 histidinol dehydrogenase low > 78
Acidovorax sp. GW101-3H11 0.61 Ac3H11_704 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.63 Ac3H11_4724 Histidinol dehydrogenase (EC 1.1.1.23) — —
Paraburkholderia graminis OAS925 0.60 ABIE53_003523 glutamate-5-semialdehyde dehydrogenase 0.61 ABIE53_003701 histidinol dehydrogenase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.59 GFF2641 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.62 GFF1314 Histidinol dehydrogenase (EC 1.1.1.23) — —
Variovorax sp. SCN45 0.58 GFF6326 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.63 GFF5345 Histidinol dehydrogenase (EC 1.1.1.23) — —
Variovorax sp. OAS795 0.57 ABID97_RS04600 glutamate-5-semialdehyde dehydrogenase 0.63 ABID97_RS23160 histidinol dehydrogenase — —
Castellaniella sp019104865 MT123 0.57 ABCV34_RS00845 glutamate-5-semialdehyde dehydrogenase 0.57 ABCV34_RS11230 histidinol dehydrogenase — —
Magnetospirillum magneticum AMB-1 0.50 AMB_RS20640 glutamate-5-semialdehyde dehydrogenase 0.46 AMB_RS16905 histidinol dehydrogenase — —
Rhodospirillum rubrum S1H 0.48 Rru_A1238 Gamma-glutamyl phosphate reductase GPR (NCBI) 0.47 Rru_A2771 Histidinol dehydrogenase (NCBI) — —
Agrobacterium fabrum C58 0.47 Atu2779 gamma-glutamyl phosphate reductase 0.46 Atu0537 histidinol dehydrogenase — —
Sinorhizobium meliloti 1021 0.47 SMc03777 gamma-glutamyl phosphate reductase 0.48 SMc02307 histidinol dehydrogenase 0.85 56
Dickeya dadantii 3937 0.47 DDA3937_RS16530 glutamate-5-semialdehyde dehydrogenase 0.33 DDA3937_RS09735 histidinol dehydrogenase 0.84 8
Dickeya dianthicola ME23 0.46 DZA65_RS17690 glutamate-5-semialdehyde dehydrogenase 0.33 DZA65_RS10055 histidinol dehydrogenase low > 75
Azospirillum sp. SherDot2 0.46 MPMX19_01943 Gamma-glutamyl phosphate reductase 0.45 MPMX19_05543 Histidinol dehydrogenase — —
Enterobacter asburiae PDN3 0.45 EX28DRAFT_2650 glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) 0.32 EX28DRAFT_0539 histidinol dehydrogenase 0.91 9
Dickeya dianthicola 67-19 0.45 HGI48_RS16600 glutamate-5-semialdehyde dehydrogenase 0.33 HGI48_RS09745 histidinol dehydrogenase low > 71
Enterobacter sp. TBS_079 0.45 MPMX20_00928 Gamma-glutamyl phosphate reductase 0.32 MPMX20_03002 Histidinol dehydrogenase 0.93 8
Klebsiella michiganensis M5al 0.45 BWI76_RS05835 gamma-glutamyl-phosphate reductase 0.32 BWI76_RS18925 histidinol dehydrogenase 0.83 20
Escherichia coli BL21 0.45 ECD_00240 gamma-glutamylphosphate reductase 0.33 ECD_01922 bifunctional histidinal dehydrogenase/ histidinol dehydrogenase low > 60
Serratia liquefaciens MT49 0.45 IAI46_04435 glutamate-5-semialdehyde dehydrogenase 0.32 IAI46_08210 histidinol dehydrogenase low > 86
Rahnella sp. WP5 0.45 EX31_RS20975 glutamate-5-semialdehyde dehydrogenase 0.33 EX31_RS11440 histidinol dehydrogenase 0.95 33
Escherichia coli ECOR38 0.45 HEPCGN_07775 proA glutamate-5-semialdehyde dehydrogenase 0.33 HEPCGN_03220 hisD Histidinol dehydrogenase low > 85
Escherichia coli ECRC99 0.45 KEDOAH_18485 proA glutamate-5-semialdehyde dehydrogenase 0.33 KEDOAH_03635 hisD Histidinol dehydrogenase — —
Escherichia coli Nissle 1917 0.45 ECOLIN_RS01830 glutamate-5-semialdehyde dehydrogenase 0.33 ECOLIN_RS11945 histidinol dehydrogenase — —
Escherichia coli ECRC101 0.45 OKFHMN_09670 proA glutamate-5-semialdehyde dehydrogenase 0.33 OKFHMN_24515 hisD Histidinol dehydrogenase — —
Escherichia coli ECRC101 0.45 MCAODC_00190 proA glutamate-5-semialdehyde dehydrogenase 0.33 MCAODC_20425 hisD Histidinol dehydrogenase — —
Escherichia coli ECRC98 0.45 JDDGAC_13295 proA glutamate-5-semialdehyde dehydrogenase 0.33 JDDGAC_28625 hisD Histidinol dehydrogenase — —
Escherichia coli ECRC102 0.45 NIAGMN_07530 proA glutamate-5-semialdehyde dehydrogenase 0.33 NIAGMN_22460 hisD Histidinol dehydrogenase — —
Escherichia coli ECRC62 0.45 BNILDI_00240 proA glutamate-5-semialdehyde dehydrogenase 0.32 BNILDI_14740 hisD Histidinol dehydrogenase — —
Escherichia coli ECOR27 0.45 NOLOHH_02045 proA glutamate-5-semialdehyde dehydrogenase 0.33 NOLOHH_15830 hisD Histidinol dehydrogenase low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_03397 Gamma-glutamyl phosphate reductase 0.33 OHPLBJKB_01680 Histidinol dehydrogenase low > 73
Rhizobium sp. OAE497 0.45 ABIE40_RS18925 glutamate-5-semialdehyde dehydrogenase 0.46 ABIE40_RS02725 histidinol dehydrogenase 0.92 15
Escherichia coli BW25113 0.45 b0243 proA gamma-glutamyl phosphate reductase (NCBI) 0.33 b2020 hisD histidinol dehydrogenase (NCBI) 0.94 7
Sphingomonas koreensis DSMZ 15582 0.44 Ga0059261_2506 glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) 0.44 Ga0059261_1281 histidinol dehydrogenase 0.95 32
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF4115 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.32 GFF3912 Histidinol dehydrogenase (EC 1.1.1.23) low > 78
Escherichia fergusonii Becca 0.44 EFB2_03777 Gamma-glutamyl phosphate reductase 0.33 EFB2_01836 Histidinol dehydrogenase low > 86
Erwinia tracheiphila SCR3 0.44 LU632_RS01190 proA glutamate-5-semialdehyde dehydrogenase 0.32 LU632_RS08945 hisD histidinol dehydrogenase low > 74
Alteromonas macleodii MIT1002 0.44 MIT1002_01885 Gamma-glutamyl phosphate reductase 0.32 MIT1002_02633 Histidinol dehydrogenase 0.97 28
Phaeobacter inhibens DSM 17395 0.44 PGA1_c15520 gamma-glutamyl phosphate reductase ProA 0.46 PGA1_c31190 histidinol dehydrogenase HisD — —
Desulfovibrio vulgaris Hildenborough JW710 0.44 DVU1953 proA gamma-glutamyl phosphate reductase (TIGR) 0.42 DVU0796 hisD histidinol dehydrogenase (TIGR) 0.80 29
Dinoroseobacter shibae DFL-12 0.44 Dshi_1469 gamma-glutamyl phosphate reductase (RefSeq) 0.45 Dshi_0979 Histidinol dehydrogenase (RefSeq) — —
Caulobacter crescentus NA1000 Δfur 0.44 CCNA_03543 gamma-glutamyl phosphate reductase 0.39 CCNA_02431 histidinol dehydrogenase low > 67
Caulobacter crescentus NA1000 0.44 CCNA_03543 gamma-glutamyl phosphate reductase 0.39 CCNA_02431 histidinol dehydrogenase 0.92 11
Pectobacterium carotovorum WPP14 0.43 HER17_RS04705 glutamate-5-semialdehyde dehydrogenase 0.33 HER17_RS12230 histidinol dehydrogenase 0.97 4
Mycobacterium tuberculosis H37Rv 0.43 Rv2427c Probable gamma-glutamyl phosphate reductase protein ProA (GPR) (glutamate-5-semialdehyde dehydrogenase) (glutamyl-gamma-semialdehyde dehydrogenase) 0.30 Rv1599 Probable histidinol dehydrogenase HisD (HDH) — —
Pantoea sp. MT58 0.43 IAI47_15115 glutamate-5-semialdehyde dehydrogenase 0.32 IAI47_07090 histidinol dehydrogenase 0.92 16
Rhodopseudomonas palustris CGA009 0.43 TX73_000855 glutamate-5-semialdehyde dehydrogenase 0.43 TX73_023540 histidinol dehydrogenase — —
Rhodanobacter denitrificans FW104-10B01 0.42 LRK54_RS02370 glutamate-5-semialdehyde dehydrogenase 0.31 LRK54_RS01605 histidinol dehydrogenase 0.77 27
Rhodanobacter denitrificans MT42 0.42 LRK55_RS02125 glutamate-5-semialdehyde dehydrogenase 0.31 LRK55_RS01385 histidinol dehydrogenase low > 63
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_11570 glutamate-5-semialdehyde dehydrogenase 0.34 CSW01_05750 histidinol dehydrogenase low > 62
Desulfovibrio vulgaris Miyazaki F 0.42 DvMF_0612 proA gamma-glutamyl phosphate reductase (RefSeq) 0.38 DvMF_2814 hisD histidinol dehydrogenase (RefSeq) 0.94 13
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.2327.1 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.34 Xcc-8004.2948.1 Histidinol dehydrogenase (EC 1.1.1.23) 0.72 43
Lysobacter sp. OAE881 0.42 ABIE51_RS13365 glutamate-5-semialdehyde dehydrogenase 0.32 ABIE51_RS13325 histidinol dehydrogenase 0.90 33
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS08680 glutamate-5-semialdehyde dehydrogenase 0.31 ABZR86_RS06730 histidinol dehydrogenase 0.89 22
Brevundimonas sp. GW460-12-10-14-LB2 0.42 A4249_RS16120 glutamate-5-semialdehyde dehydrogenase 0.28 A4249_RS10695 histidinol dehydrogenase 0.99 21
Shewanella loihica PV-4 0.42 Shew_3015 gamma-glutamyl phosphate reductase (RefSeq) 0.32 Shew_2198 histidinol dehydrogenase (RefSeq) low > 60
Shewanella sp. ANA-3 0.41 Shewana3_4057 glutamate-5-semialdehyde dehydrogenase (RefSeq) 0.32 Shewana3_1853 hisD histidinol dehydrogenase (RefSeq) low > 73
Bifidobacterium breve UCC2003 0.41 BBR_RS14075 glutamate-5-semialdehyde dehydrogenase 0.32 BBR_RS17055 histidinol dehydrogenase low > 34
Kangiella aquimarina DSM 16071 0.41 B158DRAFT_1470 glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) 0.27 B158DRAFT_2293 histidinol dehydrogenase low > 40
Shewanella oneidensis MR-1 0.40 SO1122 proA gamma-glutamyl phosphate reductase (NCBI ptt file) 0.32 SO2073 hisD histidinol dehydrogenase (NCBI ptt file) 0.98 9
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_09415 proA glutamate-5-semialdehyde dehydrogenase 0.31 OKGIIK_04950 hisD histidinol dehydrogenase low > 52
Bosea sp. OAE506 0.38 ABIE41_RS07580 glutamate-5-semialdehyde dehydrogenase 0.46 ABIE41_RS24015 histidinol dehydrogenase — —
Synechococcus elongatus PCC 7942 0.38 Synpcc7942_2265 proA glutamate-5-semialdehyde dehydrogenase 0.42 Synpcc7942_1519 hisD histidinol dehydrogenase — —
Shewanella amazonensis SB2B 0.37 Sama_2515 proA gamma-glutamyl phosphate reductase (RefSeq) 0.33 Sama_1942 hisD histidinol dehydrogenase (RefSeq) 0.94 26
Bacteroides stercoris CC31F 0.36 HMPREF1181_RS03320 glutamate-5-semialdehyde dehydrogenase 0.30 HMPREF1181_RS04860 histidinol dehydrogenase 0.96 15
Mucilaginibacter yixingensis YX-36 DSM 26809 0.35 ABZR88_RS22165 glutamate-5-semialdehyde dehydrogenase 0.32 ABZR88_RS06880 histidinol dehydrogenase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.35 CA264_07720 gamma-glutamyl-phosphate reductase 0.29 CA264_05030 histidinol dehydrogenase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.34 CA265_RS20850 glutamate-5-semialdehyde dehydrogenase 0.34 CA265_RS03635 histidinol dehydrogenase 0.91 35
Parabacteroides merdae CL09T00C40 0.34 HMPREF1078_RS10655 glutamate-5-semialdehyde dehydrogenase 0.30 HMPREF1078_RS02450 histidinol dehydrogenase 0.97 14
Bacteroides thetaiotaomicron VPI-5482 0.33 BT3718 gamma-glutamyl phosphate reductase (NCBI ptt file) 0.30 BT0201 histidinol dehydrogenase (NCBI ptt file) 0.94 13
Bacteroides ovatus ATCC 8483 0.33 BACOVA_03534 glutamate-5-semialdehyde dehydrogenase 0.30 BACOVA_01234 histidinol dehydrogenase 0.94 25
Phocaeicola vulgatus CL09T03C04 0.32 HMPREF1058_RS08645 glutamate-5-semialdehyde dehydrogenase 0.30 HMPREF1058_RS15875 histidinol dehydrogenase 0.96 7
Phocaeicola dorei CL03T12C01 0.32 ABI39_RS02875 glutamate-5-semialdehyde dehydrogenase 0.30 ABI39_RS11835 histidinol dehydrogenase 0.83 29
Echinicola vietnamensis KMM 6221, DSM 17526 0.29 Echvi_2633 gamma-glutamylphosphate reductase (EC 1.2.1.41) (from data) 0.29 Echvi_2459 histidinol dehydrogenase 0.83 32

Not shown: 1 genomes with orthologs for PS417_24745 only; 2 genomes with orthologs for PS417_04420 only