Conservation of cofitness between GFF651 and GFF829 in Hydrogenophaga sp. GW460-11-11-14-LB1

98 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF651 Aspartate carbamoyltransferase (EC 2.1.3.2) 1.0 GFF829 DNA repair protein RecN 0.66 15
Variovorax sp. SCN45 0.89 GFF2160 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.59 GFF2357 DNA repair protein RecN low > 127
Acidovorax sp. GW101-3H11 0.89 Ac3H11_3978 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.59 Ac3H11_3460 DNA repair protein RecN — —
Cupriavidus basilensis FW507-4G11 0.82 RR42_RS15860 aspartate carbamoyltransferase catalytic subunit 0.44 RR42_RS05910 DNA repair protein — —
Ralstonia solanacearum GMI1000 0.82 RS_RS03410 aspartate carbamoyltransferase 0.44 RS_RS13275 DNA repair protein RecN — —
Ralstonia solanacearum PSI07 0.82 RPSI07_RS20635 aspartate carbamoyltransferase catalytic subunit 0.45 RPSI07_RS11890 DNA repair protein RecN — —
Ralstonia solanacearum IBSBF1503 0.81 RALBFv3_RS12625 aspartate carbamoyltransferase catalytic subunit 0.45 RALBFv3_RS05415 DNA repair protein RecN — —
Paraburkholderia graminis OAS925 0.81 ABIE53_001131 aspartate carbamoyltransferase catalytic subunit 0.43 ABIE53_000856 DNA repair protein RecN (Recombination protein N) low > 113
Paraburkholderia bryophila 376MFSha3.1 0.81 H281DRAFT_04817 aspartate carbamoyltransferase 0.43 H281DRAFT_04692 DNA replication and repair protein RecN low > 103
Ralstonia solanacearum UW163 0.81 UW163_RS00940 aspartate carbamoyltransferase catalytic subunit 0.45 UW163_RS08210 DNA repair protein RecN — —
Ralstonia sp. UNC404CL21Col 0.81 ABZR87_RS08625 aspartate carbamoyltransferase catalytic subunit 0.44 ABZR87_RS01065 DNA repair protein RecN low > 80
Burkholderia phytofirmans PsJN 0.81 BPHYT_RS04235 aspartate carbamoyltransferase 0.42 BPHYT_RS03560 DNA repair protein low > 109
Paraburkholderia sabiae LMG 24235 0.81 QEN71_RS25780 aspartate carbamoyltransferase catalytic subunit 0.45 QEN71_RS26535 DNA repair protein RecN low > 153
Herbaspirillum seropedicae SmR1 0.80 HSERO_RS02330 aspartate carbamoyltransferase 0.43 HSERO_RS03060 DNA repair protein low > 78
Dechlorosoma suillum PS 0.76 Dsui_0596 aspartate carbamoyltransferase 0.42 Dsui_3072 DNA repair protein RecN — —
Pseudomonas sp. S08-1 0.66 OH686_10940 aspartate carbamoyltransferase 0.36 OH686_17050 DNA repair protein RecN — —
Pseudomonas stutzeri RCH2 0.66 Psest_0291 aspartate carbamoyltransferase 0.33 Psest_0962 DNA repair protein RecN — —
Pseudomonas putida KT2440 0.66 PP_4998 Aspartate carbamoyltransferase 0.32 PP_4729 factor used in recombination and DNA repair — —
Pseudomonas simiae WCS417 0.65 PS417_26700 aspartate carbamoyltransferase catalytic subunit 0.33 PS417_24070 recombination and repair protein — —
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_1016 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.33 PfGW456L13_5106 DNA repair protein RecN — —
Pseudomonas fluorescens SBW25 0.65 PFLU_RS28345 aspartate carbamoyltransferase 0.33 PFLU_RS25910 DNA repair protein RecN — —
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS28345 aspartate carbamoyltransferase 0.33 PFLU_RS25910 DNA repair protein RecN — —
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_08135 aspartate carbamoyltransferase catalytic subunit 0.33 AO353_05660 DNA repair protein RecN — —
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_4606 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.34 Pf6N2E2_3370 DNA repair protein RecN — —
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_13450 aspartate carbamoyltransferase catalytic subunit 0.33 AO356_07510 DNA repair protein RecN — —
Pseudomonas fluorescens FW300-N1B4 0.65 Pf1N1B4_2347 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.33 Pf1N1B4_1178 DNA repair protein RecN — —
Pseudomonas sp. RS175 0.65 PFR28_04237 Aspartate carbamoyltransferase 0.33 PFR28_00071 DNA repair protein RecN — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_0482 aspartate carbamoyltransferase 0.33 Psyr_4197 DNA replication and repair protein RecN — —
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_0482 aspartate carbamoyltransferase 0.33 Psyr_4197 DNA replication and repair protein RecN — —
Marinobacter adhaerens HP15 0.62 HP15_3507 aspartate carbamoyltransferase 0.34 HP15_3084 DNA repair protein RecN low > 73
Acinetobacter radioresistens SK82 0.59 MPMX26_01099 Aspartate carbamoyltransferase 0.27 MPMX26_00239 DNA repair protein RecN low > 36
Sinorhizobium meliloti 1021 0.49 SMc01360 aspartate carbamoyltransferase catalytic subunit 0.28 SMc01877 DNA repair protein low > 103
Rhodospirillum rubrum S1H 0.49 Rru_A3190 Aspartate carbamoyltransferase (NCBI) 0.23 Rru_A0940 DNA repair protein RecN (NCBI) — —
Magnetospirillum magneticum AMB-1 0.47 AMB_RS18300 aspartate carbamoyltransferase 0.27 AMB_RS19520 DNA repair protein RecN — —
Agrobacterium fabrum C58 0.47 Atu1308 aspartate carbamoyl transferase catalytic subunit 0.28 Atu2083 DNA repair protein RecN low > 89
Azospirillum sp. SherDot2 0.47 MPMX19_01054 Aspartate carbamoyltransferase 0.26 MPMX19_01601 DNA repair protein RecN low > 112
Bosea sp. OAE506 0.46 ABIE41_RS17230 aspartate carbamoyltransferase catalytic subunit 0.25 ABIE41_RS12645 DNA repair protein RecN low > 77
Azospirillum brasilense Sp245 0.46 AZOBR_RS20575 aspartate carbamoyltransferase 0.26 AZOBR_RS12395 DNA repair protein RecN — —
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.1722.1 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.30 Xcc-8004.3431.1 DNA repair protein RecN — —
Brevundimonas sp. GW460-12-10-14-LB2 0.46 A4249_RS04260 aspartate carbamoyltransferase catalytic subunit 0.20 A4249_RS02620 DNA repair protein RecN — —
Lysobacter sp. OAE881 0.45 ABIE51_RS16015 aspartate carbamoyltransferase catalytic subunit 0.29 ABIE51_RS11655 DNA repair protein RecN low > 62
Rhodopseudomonas palustris CGA009 0.45 TX73_016120 aspartate carbamoyltransferase catalytic subunit 0.26 TX73_018240 DNA repair protein RecN — —
Rhodanobacter denitrificans MT42 0.44 LRK55_RS03990 aspartate carbamoyltransferase catalytic subunit 0.30 LRK55_RS17815 DNA repair protein RecN — —
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS04220 aspartate carbamoyltransferase catalytic subunit 0.30 LRK54_RS17960 DNA repair protein RecN — —
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_11095 pyrB aspartate carbamoyltransferase catalytic subunit 0.29 OKGIIK_07340 recN DNA repair protein RecN — —
Dinoroseobacter shibae DFL-12 0.44 Dshi_3091 aspartate carbamoyltransferase (RefSeq) 0.22 Dshi_2413 DNA repair protein RecN (RefSeq) low > 64
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS10390 aspartate carbamoyltransferase catalytic subunit 0.31 ABZR86_RS05665 DNA repair protein RecN — —
Caulobacter crescentus NA1000 Δfur 0.43 CCNA_02525 aspartate carbamoyltransferase 0.23 CCNA_02062 DNA repair protein recN 0.66 13
Caulobacter crescentus NA1000 0.43 CCNA_02525 aspartate carbamoyltransferase 0.23 CCNA_02062 DNA repair protein recN low > 66
Mucilaginibacter yixingensis YX-36 DSM 26809 0.43 ABZR88_RS03460 aspartate carbamoyltransferase catalytic subunit 0.24 ABZR88_RS06580 DNA repair protein RecN — —
Phaeobacter inhibens DSM 17395 0.43 PGA1_c03060 aspartate carbamoyltransferase PyrB 0.25 PGA1_c09720 DNA repair protein RecN low > 62
Echinicola vietnamensis KMM 6221, DSM 17526 0.43 Echvi_4661 aspartate carbamoyltransferase 0.23 Echvi_2067 DNA repair protein RecN — —
Desulfovibrio vulgaris Hildenborough JW710 0.43 DVU2901 pyrB aspartate carbamoyltransferase (TIGR) 0.19 DVU2463 recN DNA repair protein RecN (TIGR) — —
Pedobacter sp. GW460-11-11-14-LB5 0.43 CA265_RS14660 aspartate carbamoyltransferase 0.22 CA265_RS14855 DNA repair protein RecN — —
Sphingomonas koreensis DSMZ 15582 0.42 Ga0059261_0076 aspartate carbamoyltransferase (EC 2.1.3.2) 0.27 Ga0059261_1026 DNA repair protein RecN — —
Desulfovibrio vulgaris Miyazaki F 0.41 DvMF_1425 pyrB aspartate carbamoyltransferase catalytic subunit (RefSeq) 0.17 DvMF_0923 SMC domain protein (RefSeq) low > 51
Pontibacter actiniarum KMM 6156, DSM 19842 0.41 CA264_20465 aspartate carbamoyltransferase 0.20 CA264_13235 DNA repair protein RecN 0.22 53
Mycobacterium tuberculosis H37Rv 0.40 Rv1380 Probable aspartate carbamoyltransferase PyrB (ATCase) (aspartate transcarbamylase) 0.20 Rv1696 Probable DNA repair protein RecN (recombination protein N) — —
Synechococcus elongatus PCC 7942 0.39 Synpcc7942_0670 pyrB aspartate carbamoyltransferase catalytic subunit 0.23 Synpcc7942_1779 recN DNA repair protein RecN — —
Fusobacterium nucleatum SB010 0.27 HUW76_08765 aspartate carbamoyltransferase catalytic subunit 0.23 HUW76_08055 DNA repair protein RecN low > 35
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.22 GFF930 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.36 GFF4162 DNA repair protein RecN low > 78
Escherichia coli ECOR27 0.21 NOLOHH_04125 pyrB aspartate carbamoyltransferase 0.35 NOLOHH_12815 recN DNA repair protein RecN low > 57
Enterobacter asburiae PDN3 0.21 EX28DRAFT_3446 aspartate carbamoyltransferase (EC 2.1.3.2) 0.37 EX28DRAFT_2719 DNA repair protein RecN — —
Escherichia coli ECRC62 0.21 BNILDI_07385 pyrB aspartate carbamoyltransferase 0.35 BNILDI_11620 recN DNA repair protein RecN — —
Bacteroides ovatus ATCC 8483 0.21 BACOVA_02450 aspartate carbamoyltransferase 0.23 BACOVA_00200 DNA repair protein RecN — —
Escherichia coli ECRC102 0.21 NIAGMN_09715 pyrB aspartate carbamoyltransferase 0.35 NIAGMN_18915 recN DNA repair protein RecN — —
Vibrio cholerae E7946 ATCC 55056 0.21 CSW01_12725 aspartate carbamoyltransferase 0.33 CSW01_04395 DNA repair protein RecN low > 62
Escherichia fergusonii Becca 0.21 EFB2_04288 Aspartate carbamoyltransferase catalytic subunit 0.35 EFB2_01277 DNA repair protein RecN low > 86
Bacteroides thetaiotaomicron VPI-5482 0.21 BT0742 aspartate carbamoyltransferase catalytic chain (NCBI ptt file) 0.23 BT1361 DNA repair protein recN (Recombination protein N) (NCBI ptt file) — —
Escherichia coli ECRC98 0.21 JDDGAC_15505 pyrB aspartate carbamoyltransferase 0.35 JDDGAC_24810 recN DNA repair protein RecN — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_03789 Aspartate carbamoyltransferase catalytic subunit 0.35 OHPLBJKB_01091 DNA repair protein RecN low > 73
Escherichia coli ECRC101 0.21 OKFHMN_11865 pyrB aspartate carbamoyltransferase 0.35 OKFHMN_21145 recN DNA repair protein RecN — —
Escherichia coli Nissle 1917 0.21 ECOLIN_RS24625 aspartate carbamoyltransferase 0.35 ECOLIN_RS14775 DNA repair protein RecN low > 52
Escherichia coli BL21 0.21 ECD_04113 aspartate carbamoyltransferase, catalytic subunit 0.35 ECD_02504 recombination and repair protein low > 60
Escherichia coli ECOR38 0.21 HEPCGN_10060 pyrB aspartate carbamoyltransferase 0.35 HEPCGN_20265 recN DNA repair protein RecN low > 85
Escherichia coli BW25113 0.21 b4245 pyrB aspartate carbamoyltransferase catalytic subunit (NCBI) 0.35 b2616 recN recombination and repair protein (NCBI) low > 76
Escherichia coli ECRC99 0.21 KEDOAH_16290 pyrB aspartate carbamoyltransferase 0.35 KEDOAH_07075 recN DNA repair protein RecN — —
Escherichia coli ECRC101 0.21 MCAODC_02370 pyrB aspartate carbamoyltransferase 0.35 MCAODC_11670 recN DNA repair protein RecN — —
Parabacteroides merdae CL09T00C40 0.20 HMPREF1078_RS01350 aspartate carbamoyltransferase 0.25 HMPREF1078_RS02000 DNA repair protein RecN — —
Phocaeicola vulgatus CL09T03C04 0.20 HMPREF1058_RS03820 aspartate carbamoyltransferase 0.23 HMPREF1058_RS18225 DNA repair protein RecN — —
Enterobacter sp. TBS_079 0.20 MPMX20_00544 Aspartate carbamoyltransferase catalytic subunit 0.37 MPMX20_03486 DNA repair protein RecN low > 85
Kangiella aquimarina DSM 16071 0.20 B158DRAFT_0021 aspartate carbamoyltransferase (EC 2.1.3.2) 0.33 B158DRAFT_0601 DNA replication and repair protein RecN — —
Pantoea sp. MT58 0.20 IAI47_16860 aspartate carbamoyltransferase 0.35 IAI47_04810 DNA repair protein RecN low > 76
Dickeya dadantii 3937 0.20 DDA3937_RS01925 aspartate carbamoyltransferase 0.35 DDA3937_RS04325 DNA repair protein RecN low > 74
Dickeya dianthicola 67-19 0.20 HGI48_RS01900 aspartate carbamoyltransferase 0.35 HGI48_RS04320 DNA repair protein RecN low > 71
Dickeya dianthicola ME23 0.20 DZA65_RS01970 aspartate carbamoyltransferase 0.35 DZA65_RS04235 DNA repair protein RecN low > 75
Bacteroides stercoris CC31F 0.20 HMPREF1181_RS14990 aspartate carbamoyltransferase 0.24 HMPREF1181_RS10900 DNA repair protein RecN low > 56
Klebsiella michiganensis M5al 0.20 BWI76_RS02995 aspartate carbamoyltransferase 0.35 BWI76_RS21560 DNA repair protein RecN low > 92
Phocaeicola dorei CL03T12C01 0.20 ABI39_RS17400 aspartate carbamoyltransferase 0.23 ABI39_RS14500 DNA repair protein RecN — —
Serratia liquefaciens MT49 0.20 IAI46_02275 aspartate carbamoyltransferase 0.35 IAI46_19635 DNA repair protein RecN low > 86
Bifidobacterium breve UCC2003 0.20 BBR_RS15425 aspartate carbamoyltransferase 0.19 BBR_RS14030 DNA repair protein RecN low > 34
Erwinia tracheiphila SCR3 0.20 LU632_RS20950 pyrB aspartate carbamoyltransferase 0.33 LU632_RS16985 recN DNA repair protein RecN low > 74
Rahnella sp. WP5 0.19 EX31_RS12785 aspartate carbamoyltransferase 0.35 EX31_RS21760 DNA repair protein RecN low > 89
Pectobacterium carotovorum WPP14 0.19 HER17_RS19510 aspartate carbamoyltransferase 0.35 HER17_RS17420 DNA repair protein RecN low > 75
Shewanella oneidensis MR-1 0.19 SO1301 pyrB aspartate carbamoyltransferase (NCBI ptt file) 0.35 SO3462 recN DNA repair protein RecN (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.19 Shewana3_3070 aspartate carbamoyltransferase (RefSeq) 0.35 Shewana3_1104 recombination and repair protein (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.19 MIT1002_00423 Aspartate carbamoyltransferase catalytic chain 0.29 MIT1002_01443 Recombination protein N low > 70
Shewanella loihica PV-4 0.18 Shew_1013 aspartate carbamoyltransferase (RefSeq) 0.32 Shew_1196 recombination and repair protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.18 Sama_0840 aspartate carbamoyltransferase (RefSeq) 0.35 Sama_1026 recombination and repair protein (RefSeq) low > 62

Not shown: 4 genomes with orthologs for GFF651 only; 1 genomes with orthologs for GFF829 only