Conservation of cofitness between GFF1923 and GFF762 in Sphingobium sp. HT1-2

107 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF1923 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 1.0 GFF762 Undecaprenyl-diphosphatase (EC 3.6.1.27) 0.90 4
Sphingomonas koreensis DSMZ 15582 0.52 Ga0059261_3256 glycine cleavage system T protein 0.57 Ga0059261_1796 Undecaprenyl-diphosphatase (EC 3.6.1.27) — —
Xanthobacter sp. DMC5 0.49 GFF1876 Aminomethyltransferase 0.40 GFF3716 Undecaprenyl-diphosphatase — —
Caulobacter crescentus NA1000 0.46 CCNA_03465 glycine cleavage system aminomethyltransferase T 0.40 CCNA_03719 undecaprenyl diphosphatase — —
Caulobacter crescentus NA1000 Δfur 0.46 CCNA_03465 glycine cleavage system aminomethyltransferase T 0.40 CCNA_03719 undecaprenyl diphosphatase — —
Bosea sp. OAE506 0.44 ABIE41_RS22930 glycine cleavage system aminomethyltransferase GcvT 0.42 ABIE41_RS03125 undecaprenyl-diphosphate phosphatase — —
Azospirillum sp. SherDot2 0.44 MPMX19_01029 Aminomethyltransferase 0.50 MPMX19_02659 Undecaprenyl-diphosphatase low > 112
Rhodopseudomonas palustris CGA009 0.43 TX73_019925 glycine cleavage system aminomethyltransferase GcvT 0.45 TX73_000225 undecaprenyl-diphosphate phosphatase — —
Pseudomonas sp. DMC3 0.43 GFF5171 Aminomethyltransferase 0.40 GFF2690 Undecaprenyl-diphosphatase low > 89
Magnetospirillum magneticum AMB-1 0.42 AMB_RS03925 glycine cleavage system protein T 0.52 AMB_RS07820 UDP pyrophosphate phosphatase — —
Pseudomonas lactucae CFBP13502 0.42 GEMAOFIL_04610 Aminomethyltransferase 0.39 GEMAOFIL_03252 Undecaprenyl-diphosphatase low > 93
Pseudomonas segetis P6 0.42 MPMX49_03619 Aminomethyltransferase 0.40 MPMX49_02210 Undecaprenyl-diphosphatase low > 75
Pseudomonas sp. BP01 0.42 JOY50_RS11290 gcvT glycine cleavage system aminomethyltransferase GcvT 0.40 JOY50_RS05735 undecaprenyl-diphosphate phosphatase low > 84
Pseudomonas simiae WCS417 0.41 PS417_22370 Aminomethyltransferase (EC 2.1.2.10) (from data) 0.39 PS417_13065 UDP pyrophosphate phosphatase low > 88
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_18160 glycine cleavage system protein T 0.39 AO356_27775 UDP pyrophosphate phosphatase low > 104
Pseudomonas sp. RS175 0.41 PFR28_03385 Aminomethyltransferase 0.39 PFR28_01689 Undecaprenyl-diphosphatase low > 88
Pseudomonas fluorescens SBW25 0.41 PFLU_RS24010 glycine cleavage system aminomethyltransferase GcvT 0.39 PFLU_RS13705 undecaprenyl-diphosphate phosphatase low > 109
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS24010 glycine cleavage system aminomethyltransferase GcvT 0.39 PFLU_RS13705 undecaprenyl-diphosphate phosphatase low > 109
Pseudomonas putida KT2440 0.41 PP_0986 aminomethyltransferase 0.40 PP_2862 Undecaprenyl-diphosphatase low > 96
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_03510 glycine cleavage system protein T 0.40 AO353_25760 UDP pyrophosphate phosphatase low > 101
Pseudomonas aeruginosa PA14 0.41 IKLFDK_12005 glycine cleavage system aminomethyltransferase GcvT 0.37 IKLFDK_09565 undecaprenyl-diphosphate phosphatase low > 100
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_5556 Aminomethyltransferase (EC 2.1.2.10) (from data) 0.39 Pf6N2E2_773 Undecaprenyl-diphosphatase (EC 3.6.1.27) low > 103
Pseudomonas sp. SVBP6 0.40 COO64_RS04440 gcvT glycine cleavage system aminomethyltransferase GcvT 0.39 COO64_RS14725 undecaprenyl-diphosphate phosphatase low > 93
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_1095 Glycine cleavage system T protein 0.38 Psyr_3008 Undecaprenyl-diphosphatase low > 86
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_1095 Glycine cleavage system T protein 0.38 Psyr_3008 Undecaprenyl-diphosphatase low > 86
Agrobacterium fabrum C58 0.40 Atu1464 glycine cleavage system T protein, aminomethyltransferase 0.44 Atu0294 undecaprenyl pyrophosphate phosphatase, possible bacitracin resistance protein low > 89
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_623 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.40 Pf1N1B4_4741 Undecaprenyl-diphosphatase (EC 3.6.1.27) low > 87
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_1866 Aminomethyltransferase (EC 2.1.2.10) (from data) 0.40 PfGW456L13_3016 Undecaprenyl-diphosphatase (EC 3.6.1.27) low > 87
Rhodospirillum rubrum S1H 0.40 Rru_A3051 Glycine cleavage system T protein (NCBI) 0.39 Rru_A1803 Undecaprenol kinase (NCBI) low > 58
Sinorhizobium meliloti 1021 0.39 SMc02047 glycine cleavage system aminomethyltransferase T 0.40 SMc00408 UDP pyrophosphate phosphatase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF5213 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.22 GFF813 Undecaprenyl-diphosphatase (EC 3.6.1.27) — —
Acidovorax sp. GW101-3H11 0.39 Ac3H11_165 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.38 Ac3H11_3630 Undecaprenyl-diphosphatase (EC 3.6.1.27) low > 79
Rhizobium sp. OAE497 0.39 ABIE40_RS09940 glycine cleavage system aminomethyltransferase GcvT 0.31 ABIE40_RS01320 undecaprenyl-diphosphate phosphatase — —
Dinoroseobacter shibae DFL-12 0.38 Dshi_2682 glycine cleavage system T protein (RefSeq) 0.20 Dshi_3593 Bacitracin resistance protein BacA (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.38 PGA1_78p00290 aminomethyltransferase GcvT 0.20 PGA1_c36070 undecaprenyl-diphosphatase UppP — —
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_15350 glycine cleavage system aminomethyltransferase T 0.25 CSW01_02795 undecaprenyl-diphosphatase low > 62
Variovorax sp. SCN45 0.35 GFF6476 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.39 GFF6649 Undecaprenyl-diphosphatase (EC 3.6.1.27) low > 127
Synechococcus elongatus PCC 7942 0.31 Synpcc7942_2308 gcvT glycine cleavage system aminomethyltransferase T 0.22 Synpcc7942_1967 cacA undecaprenyl pyrophosphate phosphatase — —
Synechocystis sp000284455 PCC 6803 0.28 SGL_RS12745 glycine cleavage system aminomethyltransferase GcvT 0.20 SGL_RS13530 undecaprenyl-diphosphate phosphatase — —
Desulfovibrio vulgaris Hildenborough JW710 0.28 DVU1684 gcvT glycine cleavage system T protein (TIGR) 0.41 DVU1660 undecaprenol kinase, putative (TIGR) — —
Kangiella aquimarina DSM 16071 0.27 B158DRAFT_0543 glycine cleavage system T protein 0.24 B158DRAFT_0833 undecaprenyl-diphosphatase UppP — —
Rhodanobacter sp000427505 FW510-R12 0.26 LRK53_RS04495 glycine cleavage system aminomethyltransferase GcvT 0.31 LRK53_RS00300 undecaprenyl-diphosphate phosphatase — —
Dyella japonica UNC79MFTsu3.2 0.26 ABZR86_RS18875 glycine cleavage system aminomethyltransferase GcvT 0.31 ABZR86_RS15435 undecaprenyl-diphosphate phosphatase — —
Desulfovibrio vulgaris Miyazaki F 0.25 DvMF_0341 glycine cleavage system T protein (RefSeq) 0.41 DvMF_0378 undecaprenol kinase (RefSeq) low > 51
Rhodanobacter sp. FW510-T8 0.25 OKGIIK_01305 gcvT glycine cleavage system aminomethyltransferase GcvT 0.27 OKGIIK_14940 undecaprenyl-diphosphate phosphatase low > 53
Pseudomonas sp. S08-1 0.25 OH686_11175 glycine cleavage system T protein 0.40 OH686_00730 undecaprenyl-diphosphatase UppP — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.25 CA264_00210 glycine cleavage system protein T 0.41 CA264_04645 UDP-diphosphatase — —
Lysobacter sp. OAE881 0.25 ABIE51_RS16365 glycine cleavage system aminomethyltransferase GcvT 0.26 ABIE51_RS01460 undecaprenyl-diphosphate phosphatase — —
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_02411 aminomethyltransferase 0.39 H281DRAFT_04037 Undecaprenyl-diphosphatase (EC 3.6.1.27) — —
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS19320 glycine cleavage system protein T 0.36 BPHYT_RS15475 UDP pyrophosphate phosphatase — —
Pedobacter sp. GW460-11-11-14-LB5 0.25 CA265_RS23960 glycine cleavage system protein T 0.42 CA265_RS16150 UDP-diphosphatase low > 88
Paraburkholderia graminis OAS925 0.25 ABIE53_000236 aminomethyltransferase 0.40 ABIE53_003261 undecaprenyl-diphosphatase low > 113
Phocaeicola dorei CL03T12C01 0.25 ABI39_RS18950 glycine cleavage system aminomethyltransferase GcvT 0.25 ABI39_RS05620 undecaprenyl-diphosphate phosphatase low > 72
Phocaeicola vulgatus CL09T03C04 0.25 HMPREF1058_RS04685 glycine cleavage system aminomethyltransferase GcvT 0.25 HMPREF1058_RS11310 undecaprenyl-diphosphate phosphatase low > 67
Pseudomonas stutzeri RCH2 0.25 Psest_0181 glycine cleavage system T protein 0.40 Psest_2113 undecaprenyl-diphosphatase UppP — —
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS05510 glycine cleavage system aminomethyltransferase GcvT 0.29 LRK54_RS08125 undecaprenyl-diphosphate phosphatase low > 59
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS29205 glycine cleavage system aminomethyltransferase GcvT 0.39 QEN71_RS03215 undecaprenyl-diphosphate phosphatase — —
Rhodanobacter denitrificans MT42 0.25 LRK55_RS05280 glycine cleavage system aminomethyltransferase GcvT 0.30 LRK55_RS07875 undecaprenyl-diphosphate phosphatase low > 63
Bacteroides stercoris CC31F 0.24 HMPREF1181_RS13255 glycine cleavage system aminomethyltransferase GcvT 0.39 HMPREF1181_RS01715 undecaprenyl-diphosphate phosphatase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.24 ABZR88_RS21210 glycine cleavage system aminomethyltransferase GcvT 0.37 ABZR88_RS02060 undecaprenyl-diphosphate phosphatase — —
Shewanella loihica PV-4 0.24 Shew_3064 gcvT glycine cleavage system aminomethyltransferase T (RefSeq) 0.29 Shew_1004 undecaprenyl pyrophosphate phosphatase (RefSeq) low > 60
Mycobacterium tuberculosis H37Rv 0.24 Rv2211c Probable aminomethyltransferase GcvT (glycine cleavage system T protein) 0.21 Rv2136c Possible conserved transmembrane protein — —
Cupriavidus basilensis FW507-4G11 0.24 RR42_RS20060 glycine cleavage system protein T 0.37 RR42_RS15630 UDP pyrophosphate phosphatase — —
Shewanella oneidensis MR-1 0.24 SO0779 gcvT glycine cleavage system T protein (NCBI ptt file) 0.38 SO4274 undecaprenol kinase, putative (NCBI ptt file) low > 76
Echinicola vietnamensis KMM 6221, DSM 17526 0.24 Echvi_0091 glycine cleavage system T protein 0.23 Echvi_3275 Uncharacterized bacitracin resistance protein — —
Xanthomonas campestris pv. campestris strain 8004 0.24 Xcc-8004.1567.1 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.26 Xcc-8004.245.1 Undecaprenyl-diphosphatase (EC 3.6.1.27) — —
Bacteroides ovatus ATCC 8483 0.24 BACOVA_05378 aminomethyltransferase 0.39 BACOVA_02913 undecaprenyl-diphosphatase UppP — —
Dechlorosoma suillum PS 0.24 Dsui_2735 glycine cleavage system T protein 0.35 Dsui_0449 undecaprenyl-diphosphatase UppP — —
Shewanella sp. ANA-3 0.24 Shewana3_3501 gcvT glycine cleavage system aminomethyltransferase T (RefSeq) 0.29 Shewana3_3079 undecaprenyl pyrophosphate phosphatase (RefSeq) 0.34 51
Cellulophaga baltica 18 0.23 M666_RS11590 glycine cleavage system aminomethyltransferase GcvT 0.25 M666_RS03055 undecaprenyl-diphosphate phosphatase low > 67
Bacteroides thetaiotaomicron VPI-5482 0.23 BT4584 putative aminomethyltransferase (NCBI ptt file) 0.25 BT3212 putative bacitracin resistance protein (NCBI ptt file) — —
Pantoea agglomerans CFBP13505 P0401 0.23 PagCFBP13505_RS15935 glycine cleavage system aminomethyltransferase GcvT 0.39 PagCFBP13505_RS11900 undecaprenyl-diphosphate phosphatase low > 74
Ralstonia sp. UNC404CL21Col 0.23 ABZR87_RS03925 glycine cleavage system aminomethyltransferase GcvT 0.36 ABZR87_RS08795 undecaprenyl-diphosphate phosphatase 0.57 4
Erwinia tracheiphila HP pepo 2.2 0.23 IJEDHG_03260 gcvT glycine cleavage system aminomethyltransferase GcvT 0.39 IJEDHG_14365 bacA undecaprenyl-diphosphate phosphatase — —
Serratia liquefaciens MT49 0.23 IAI46_20860 glycine cleavage system aminomethyltransferase GcvT 0.38 IAI46_22080 undecaprenyl-diphosphate phosphatase low > 86
Erwinia tracheiphila SCR3 0.23 LU632_RS05905 gcvT glycine cleavage system aminomethyltransferase GcvT 0.39 LU632_RS20695 bacA undecaprenyl-diphosphate phosphatase low > 74
Dickeya dadantii 3937 0.23 DDA3937_RS03245 glycine cleavage system aminomethyltransferase GcvT 0.36 DDA3937_RS17125 undecaprenyl-diphosphate phosphatase low > 74
Alteromonas macleodii MIT1002 0.23 MIT1002_02973 Aminomethyltransferase 0.26 MIT1002_00743 Undecaprenyl-diphosphatase — —
Ralstonia solanacearum GMI1000 0.23 RS_RS16500 aminomethyltransferase 0.36 RS_RS03525 undecaprenyl-diphosphatase — —
Dickeya dianthicola ME23 0.23 DZA65_RS03435 glycine cleavage system aminomethyltransferase GcvT 0.36 DZA65_RS18260 undecaprenyl-diphosphate phosphatase low > 75
Ralstonia solanacearum IBSBF1503 0.23 RALBFv3_RS08650 glycine cleavage system protein T 0.37 RALBFv3_RS12745 undecaprenyl-diphosphate phosphatase — —
Ralstonia solanacearum UW163 0.23 UW163_RS04960 glycine cleavage system protein T 0.37 UW163_RS00820 undecaprenyl-diphosphate phosphatase — —
Ralstonia solanacearum PSI07 0.23 RPSI07_RS08585 glycine cleavage system protein T 0.35 RPSI07_RS20515 undecaprenyl-diphosphate phosphatase — —
Erwinia amylovora T8 0.23 OLJFJH_08775 glycine cleavage system aminomethyltransferase GcvT 0.38 OLJFJH_07615 undecaprenyl-diphosphate phosphatase low > 58
Dickeya dianthicola 67-19 0.23 HGI48_RS03390 glycine cleavage system aminomethyltransferase GcvT 0.36 HGI48_RS17175 undecaprenyl-diphosphate phosphatase low > 71
Pantoea sp. MT58 0.23 IAI47_03765 glycine cleavage system aminomethyltransferase GcvT 0.38 IAI47_03080 undecaprenyl-diphosphate phosphatase low > 76
Rahnella sp. WP5 0.23 EX31_RS21510 glycine cleavage system aminomethyltransferase GcvT 0.37 EX31_RS08165 undecaprenyl-diphosphate phosphatase low > 89
Shewanella amazonensis SB2B 0.22 Sama_2721 gcvT glycine cleavage system aminomethyltransferase T (RefSeq) 0.28 Sama_0831 undecaprenyl pyrophosphate phosphatase (RefSeq) low > 62
Pectobacterium carotovorum WPP14 0.22 HER17_RS18005 glycine cleavage system aminomethyltransferase GcvT 0.37 HER17_RS04015 undecaprenyl-diphosphate phosphatase low > 75
Parabacteroides merdae CL09T00C40 0.22 HMPREF1078_RS10420 glycine cleavage system aminomethyltransferase GcvT 0.25 HMPREF1078_RS17115 undecaprenyl-diphosphate phosphatase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.22 GFF3005 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.38 GFF3171 Undecaprenyl-diphosphatase (EC 3.6.1.27) low > 78
Enterobacter sp. TBS_079 0.22 MPMX20_03764 Aminomethyltransferase 0.38 MPMX20_03894 Undecaprenyl-diphosphatase low > 85
Escherichia fergusonii Becca 0.21 EFB2_00997 Aminomethyltransferase 0.38 EFB2_00754 Undecaprenyl-diphosphatase low > 86
Enterobacter asburiae PDN3 0.21 EX28DRAFT_2957 glycine cleavage system T protein 0.38 EX28DRAFT_3085 undecaprenyl-diphosphatase UppP low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_00810 Aminomethyltransferase 0.38 OHPLBJKB_00647 Undecaprenyl-diphosphatase low > 74
Escherichia coli ECRC98 0.21 JDDGAC_23160 gcvT glycine cleavage system aminomethyltransferase GcvT 0.38 JDDGAC_22340 bacA undecaprenyl-diphosphate phosphatase low > 87
Escherichia coli ECOR27 0.21 NOLOHH_11435 gcvT glycine cleavage system aminomethyltransferase GcvT 0.38 NOLOHH_10495 bacA undecaprenyl-diphosphate phosphatase low > 76
Escherichia coli ECRC100 0.21 OKFHMN_19520 gcvT glycine cleavage system aminomethyltransferase GcvT 0.38 OKFHMN_18705 bacA undecaprenyl-diphosphate phosphatase low > 79
Escherichia coli ECRC102 0.21 NIAGMN_17285 gcvT glycine cleavage system aminomethyltransferase GcvT 0.38 NIAGMN_16470 bacA undecaprenyl-diphosphate phosphatase low > 80
Escherichia coli ECRC99 0.21 KEDOAH_08620 gcvT glycine cleavage system aminomethyltransferase GcvT 0.38 KEDOAH_09440 bacA undecaprenyl-diphosphate phosphatase — —
Escherichia coli BW25113 0.21 b2905 gcvT glycine cleavage system aminomethyltransferase T (NCBI) 0.38 b3057 bacA undecaprenyl pyrophosphate phosphatase (NCBI) low > 76
Escherichia coli ECRC62 0.21 BNILDI_09970 gcvT glycine cleavage system aminomethyltransferase GcvT 0.38 BNILDI_01020 bacA undecaprenyl-diphosphate phosphatase low > 75
Escherichia coli ECRC101 0.21 MCAODC_10040 gcvT glycine cleavage system aminomethyltransferase GcvT 0.38 MCAODC_09220 bacA undecaprenyl-diphosphate phosphatase low > 88
Escherichia coli BL21 0.21 ECD_02737 aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex 0.38 ECD_02927 undecaprenyl pyrophosphate phosphatase low > 61
Escherichia coli ECOR38 0.21 HEPCGN_18810 gcvT glycine cleavage system aminomethyltransferase GcvT 0.38 HEPCGN_17560 bacA undecaprenyl-diphosphate phosphatase low > 88
Escherichia coli Nissle 1917 0.21 ECOLIN_RS16175 glycine cleavage system aminomethyltransferase GcvT 0.38 ECOLIN_RS17655 undecaprenyl-diphosphate phosphatase 0.31 54
Klebsiella pneumoniae MKP103 0.21 KDGMDA_04380 glycine cleavage system aminomethyltransferase GcvT 0.37 KDGMDA_05290 undecaprenyl-diphosphate phosphatase 0.24 21
Klebsiella michiganensis M5al 0.21 BWI76_RS23880 Aminomethyltransferase (EC 2.1.2.10) (from data) 0.37 BWI76_RS24480 undecaprenyl-diphosphatase low > 92

Not shown: 3 genomes with orthologs for GFF1923 only; 10 genomes with orthologs for GFF762 only