Conservation of cofitness between PS417_02485 and PS417_28070 in Pseudomonas simiae WCS417

95 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_02485 tRNA delta(2)-isopentenylpyrophosphate transferase 1.0 PS417_28070 phosphate ABC transporter ATP-binding protein 0.37 7
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS02565 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.99 PFLU_RS29755 phosphate ABC transporter ATP-binding protein low > 109
Pseudomonas fluorescens SBW25 0.98 PFLU_RS02565 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.99 PFLU_RS29755 phosphate ABC transporter ATP-binding protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_13140 tRNA dimethylallyltransferase 0.97 AO353_09890 phosphate ABC transporter ATP-binding protein low > 101
Pseudomonas fluorescens GW456-L13 0.88 PfGW456L13_155 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.97 PfGW456L13_756 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) low > 87
Pseudomonas fluorescens FW300-N1B4 0.88 Pf1N1B4_1413 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.97 Pf1N1B4_2037 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)
Pseudomonas fluorescens FW300-N2C3 0.87 AO356_08660 tRNA dimethylallyltransferase 0.97 AO356_11030 phosphate ABC transporter ATP-binding protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_3615 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.96 Pf6N2E2_4072 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)
Pseudomonas sp. RS175 0.86 PFR28_05120 tRNA dimethylallyltransferase 0.96 PFR28_04486 Phosphate import ATP-binding protein PstB low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.85 Psyr_0571 tRNA isopentenyltransferase 0.91 Psyr_5038 phosphate ABC transporter ATP-binding protein, PhoT family low > 86
Pseudomonas syringae pv. syringae B728a 0.85 Psyr_0571 tRNA isopentenyltransferase 0.91 Psyr_5038 phosphate ABC transporter ATP-binding protein, PhoT family low > 86
Pseudomonas putida KT2440 0.77 PP_4895 tRNA dimethylallyltransferase 0.97 PP_5326 phosphate ABC transporter ATP-binding protein
Pseudomonas stutzeri RCH2 0.75 Psest_0682 tRNA dimethylallyltransferase 0.90 Psest_0222 phosphate ABC transporter, ATP-binding protein
Pseudomonas sp. S08-1 0.73 OH686_09475 tRNA dimethylallyltransferase 0.90 OH686_13425 phosphate ABC transporter, ATP-binding protein low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_03871 tRNA dimethylallyltransferase 0.58 OHPLBJKB_04328 Phosphate import ATP-binding protein PstB
Escherichia coli BW25113 0.59 b4171 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) 0.58 b3725 pstB phosphate transporter subunit (NCBI) low > 76
Escherichia coli BL21 0.59 ECD_04038 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase 0.58 ECD_03609 phosphate ABC transporter ATPase
Klebsiella michiganensis M5al 0.59 BWI76_RS02530 tRNA dimethylallyltransferase 0.58 BWI76_RS00145 phosphate ABC transporter ATP-binding protein
Escherichia coli ECOR27 0.59 NOLOHH_04525 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.58 NOLOHH_07025 pstB phosphate ABC transporter ATP-binding protein PstB
Vibrio cholerae E7946 ATCC 55056 0.59 CSW01_01830 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.69 CSW01_03795 phosphate ABC transporter ATP-binding protein low > 62
Escherichia coli ECOR38 0.59 HEPCGN_10490 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.58 HEPCGN_13605 pstB phosphate ABC transporter ATP-binding protein PstB
Escherichia coli ECRC62 0.59 BNILDI_06965 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.58 BNILDI_04500 pstB phosphate ABC transporter ATP-binding protein PstB
Escherichia coli ECRC102 0.59 NIAGMN_10110 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.58 NIAGMN_12650 pstB phosphate ABC transporter ATP-binding protein PstB
Escherichia fergusonii Becca 0.59 EFB2_04364 tRNA dimethylallyltransferase 0.58 EFB2_04908 Phosphate import ATP-binding protein PstB low > 86
Escherichia coli Nissle 1917 0.59 ECOLIN_RS24225 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.58 ECOLIN_RS21435 phosphate ABC transporter ATP-binding protein PstB
Escherichia coli ECRC99 0.59 KEDOAH_15895 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.58 KEDOAH_13255 pstB phosphate ABC transporter ATP-binding protein PstB
Escherichia coli ECRC98 0.59 JDDGAC_15900 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.58 JDDGAC_18515 pstB phosphate ABC transporter ATP-binding protein PstB
Escherichia coli ECRC101 0.59 MCAODC_02775 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.58 MCAODC_05400 pstB phosphate ABC transporter ATP-binding protein PstB
Escherichia coli ECRC101 0.59 OKFHMN_12260 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.58 OKFHMN_14895 pstB phosphate ABC transporter ATP-binding protein PstB
Enterobacter asburiae PDN3 0.59 EX28DRAFT_3368 tRNA dimethylallyltransferase 0.58 EX28DRAFT_4001 phosphate ABC transporter, ATP-binding protein
Dickeya dadantii 3937 0.58 DDA3937_RS18615 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.66 DDA3937_RS15135 phosphate ABC transporter ATP-binding protein 0.38 56
Enterobacter sp. TBS_079 0.58 MPMX20_00452 tRNA dimethylallyltransferase 0.58 MPMX20_04642 Phosphate import ATP-binding protein PstB low > 85
Dickeya dianthicola ME23 0.58 DZA65_RS19685 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.66 DZA65_RS16030 phosphate ABC transporter ATP-binding protein low > 75
Rahnella sp. WP5 0.58 EX31_RS08825 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.57 EX31_RS06055 phosphate ABC transporter ATP-binding protein PstB low > 89
Dickeya dianthicola 67-19 0.58 HGI48_RS18550 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.65 HGI48_RS15210 phosphate ABC transporter ATP-binding protein low > 71
Pectobacterium carotovorum WPP14 0.58 HER17_RS02580 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.64 HER17_RS06440 phosphate ABC transporter ATP-binding protein PstB low > 75
Shewanella oneidensis MR-1 0.58 SO0602 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI ptt file) 0.71 SO1725 pstB-1 phosphate ABC transporter, ATP-binding protein (NCBI ptt file)
Shewanella loihica PV-4 0.57 Shew_0565 tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) 0.72 Shew_1700 phosphate ABC transporter, ATPase subunit (RefSeq)
Serratia liquefaciens MT49 0.57 IAI46_01620 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.66 IAI46_18900 phosphate ABC transporter ATP-binding protein low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF824 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.58 GFF1737 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) low > 78
Pantoea sp. MT58 0.57 IAI47_02585 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.64 IAI47_05170 phosphate ABC transporter ATP-binding protein low > 76
Marinobacter adhaerens HP15 0.56 HP15_2500 tRNA delta(2)-isopentenylpyrophosphate transferase 0.55 HP15_3386 phosphate ABC transporter, ATPase subunit
Shewanella sp. ANA-3 0.56 Shewana3_0596 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) 0.71 Shewana3_2732 phosphate ABC transporter, ATPase subunit (RefSeq)
Alteromonas macleodii MIT1002 0.56 MIT1002_03789 tRNA dimethylallyltransferase 0.61 MIT1002_00876 Phosphate import ATP-binding protein PstB 3
Shewanella amazonensis SB2B 0.56 Sama_3026 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) 0.71 Sama_1410 phosphate ABC transporter, ATP-binding protein (RefSeq)
Erwinia tracheiphila SCR3 0.54 LU632_RS02050 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.58 LU632_RS24895 pstB phosphate ABC transporter ATP-binding protein PstB low > 74
Kangiella aquimarina DSM 16071 0.53 B158DRAFT_1951 tRNA dimethylallyltransferase 0.75 B158DRAFT_0893 phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) low > 40
Dechlorosoma suillum PS 0.53 Dsui_1552 tRNA isopentenyltransferase MiaA 0.57 Dsui_3053 phosphate ABC transporter, ATP-binding protein
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS08370 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.52 ABZR86_RS08245 phosphate ABC transporter ATP-binding protein PstB
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_06625 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.54 OKGIIK_06840 pstB phosphate ABC transporter ATP-binding protein PstB
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS04185 tRNA delta(2)-isopentenylpyrophosphate transferase 0.58 HSERO_RS06325 phosphate ABC transporter ATP-binding protein
Rhodanobacter denitrificans FW104-10B01 0.51 LRK54_RS00635 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.54 LRK54_RS00470 phosphate ABC transporter ATP-binding protein PstB
Rhodanobacter denitrificans MT42 0.51 LRK55_RS00405 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.54 LRK55_RS00210 phosphate ABC transporter ATP-binding protein PstB
Ralstonia solanacearum GMI1000 0.51 RS_RS12855 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.57 RS_RS07685 phosphate ABC transporter ATP-binding protein low > 80
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_04711 tRNA dimethylallyltransferase 0.56 H281DRAFT_04414 phosphate ABC transporter ATP-binding protein, PhoT family
Paraburkholderia graminis OAS925 0.51 ABIE53_000875 tRNA dimethylallyltransferase 0.56 ABIE53_002992 phosphate transport system ATP-binding protein low > 113
Ralstonia solanacearum PSI07 0.51 RPSI07_RS12065 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.57 RPSI07_RS15310 phosphate ABC transporter ATP-binding protein PstB 0.52 42
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS26440 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.56 QEN71_RS04835 phosphate ABC transporter ATP-binding protein PstB
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS00875 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.58 ABZR87_RS14085 phosphate ABC transporter ATP-binding protein PstB low > 80
Ralstonia solanacearum UW163 0.49 UW163_RS08390 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.57 UW163_RS15445 phosphate ABC transporter ATP-binding protein PstB
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS17210 tRNA delta(2)-isopentenylpyrophosphate transferase 0.57 RR42_RS13455 phosphate ABC transporter ATP-binding protein
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS05235 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.57 RALBFv3_RS02135 phosphate ABC transporter ATP-binding protein PstB low > 76
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS03645 tRNA dimethylallyltransferase 0.56 BPHYT_RS14130 phosphate ABC transporter ATP-binding protein low > 109
Castellaniella sp019104865 MT123 0.48 ABCV34_RS08790 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.57 ABCV34_RS15600 phosphate ABC transporter ATP-binding protein PstB
Lysobacter sp. OAE881 0.47 ABIE51_RS06535 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.54 ABIE51_RS07530 phosphate ABC transporter ATP-binding protein PstB low > 62
Variovorax sp. OAS795 0.46 ABID97_RS20320 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.56 ABID97_RS14610 phosphate ABC transporter ATP-binding protein PstB
Acidovorax sp. GW101-3H11 0.46 Ac3H11_319 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.58 Ac3H11_459 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) low > 79
Variovorax sp. SCN45 0.46 GFF4798 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.56 GFF1095 Phosphate ABC transporter, ATP-binding protein PstB (TC 3.A.1.7.1)
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.3121.1 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.53 Xcc-8004.3363.1 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)
Acinetobacter radioresistens SK82 0.43 MPMX26_01208 tRNA dimethylallyltransferase 0.54 MPMX26_01041 Phosphate import ATP-binding protein PstB
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF5491 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.57 GFF4233 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) low > 90
Synechococcus elongatus PCC 7942 0.30 Synpcc7942_2490 miaA tRNA delta(2)-isopentenylpyrophosphate transferase 0.56 Synpcc7942_2441 pstB Phosphate transport system permease protein 1
Sinorhizobium meliloti 1021 0.28 SMc01435 tRNA delta(2)-isopentenylpyrophosphate transferase 0.59 SMc02142 phosphate transporter ATP-binding protein
Rhizobium sp. OAE497 0.27 ABIE40_RS11505 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.59 ABIE40_RS02300 phosphate ABC transporter ATP-binding protein PstB
Rhodopseudomonas palustris CGA009 0.26 TX73_010460 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.55 TX73_024830 phosphate ABC transporter ATP-binding protein PstB low > 86
Agrobacterium fabrum C58 0.26 Atu2039 tRNA delta(2)-isopentenylpyrophosphate 0.59 Atu0423 ABC transporter, nucleotide binding/ATPase protein
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_12070 tRNA dimethylallyltransferase 0.62 CA264_18730 phosphate ABC transporter ATP-binding protein low > 74
Desulfovibrio vulgaris Hildenborough JW710 0.26 DVU1533 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (TIGR) 0.60 DVU1084 pstB-1 phosphate ABC transporter, ATP-binding protein (TIGR)
Sphingomonas koreensis DSMZ 15582 0.26 Ga0059261_0069 tRNA dimethylallyltransferase 0.60 Ga0059261_3653 phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1)
Caulobacter crescentus NA1000 0.25 CCNA_02183 tRNA delta(2)-isopentenylpyrophosphate transferase 0.57 CCNA_00294 phosphate transport ATP-binding protein pstB
Caulobacter crescentus NA1000 Δfur 0.25 CCNA_02183 tRNA delta(2)-isopentenylpyrophosphate transferase 0.57 CCNA_00294 phosphate transport ATP-binding protein pstB
Desulfovibrio vulgaris Miyazaki F 0.25 DvMF_0174 tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) 0.61 DvMF_0881 phosphate ABC transporter, ATPase subunit (RefSeq)
Bifidobacterium breve UCC2003 0.24 BBR_RS16565 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.52 BBR_RS19150 phosphate ABC transporter ATP-binding protein
Bacteroides ovatus ATCC 8483 0.24 BACOVA_05050 tRNA dimethylallyltransferase 0.59 BACOVA_00604 phosphate ABC transporter, ATP-binding protein low > 94
Bosea sp. OAE506 0.23 ABIE41_RS12880 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.55 ABIE41_RS08900 phosphate ABC transporter ATP-binding protein PstB low > 77
Bacteroides thetaiotaomicron VPI-5482 0.23 BT4203 tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI ptt file) 0.59 BT1321 putative phosphate transport ATP-binding protein (NCBI ptt file)
Azospirillum brasilense Sp245 0.23 AZOBR_RS06550 tRNA delta(2)-isopentenylpyrophosphate transferase 0.55 AZOBR_RS01115 phosphate ABC transporter ATP-binding protein
Mycobacterium tuberculosis H37Rv 0.23 Rv2727c Probable tRNA delta(2)-isopentenylpyrophosphate transferase MiaA (IPP transferase) (isopentenyl-diphosphate:tRNA isopentenyltransferase) (iptase) (IPPT) 0.50 Rv0820 Probable phosphate-transport ATP-binding protein ABC transporter PhoT
Azospirillum sp. SherDot2 0.22 MPMX19_01778 tRNA dimethylallyltransferase 0.56 MPMX19_02586 Phosphate import ATP-binding protein PstB
Phocaeicola dorei CL03T12C01 0.22 ABI39_RS00520 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.59 ABI39_RS20365 phosphate ABC transporter ATP-binding protein low > 72
Phocaeicola vulgatus CL09T03C04 0.22 HMPREF1058_RS08065 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.59 HMPREF1058_RS06570 phosphate ABC transporter ATP-binding protein low > 67
Magnetospirillum magneticum AMB-1 0.21 AMB_RS17735 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.56 AMB_RS06945 phosphate ABC transporter ATP-binding protein low > 64
Parabacteroides merdae CL09T00C40 0.21 HMPREF1078_RS13930 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.56 HMPREF1078_RS17185 phosphate ABC transporter ATP-binding protein PstB low > 61
Rhodospirillum rubrum S1H 0.19 Rru_A0466 tRNA isopentenyltransferase (NCBI) 0.56 Rru_A0601 Phosphate transport system permease protein 1 (NCBI)
Phaeobacter inhibens DSM 17395 0.18 PGA1_c14200 tRNA delta(2)-isopentenylpyrophosphate transferase MiaA 0.55 PGA1_c15750 phosphate import ATP-binding protein PstB
Dinoroseobacter shibae DFL-12 0.17 Dshi_1492 tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) 0.55 Dshi_1536 phosphate ABC transporter, ATPase subunit (RefSeq)

Not shown: 6 genomes with orthologs for PS417_02485 only; 2 genomes with orthologs for PS417_28070 only