Conservation of cofitness between Echvi_2067 and Echvi_0044 in Echinicola vietnamensis KMM 6221, DSM 17526

98 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Echinicola vietnamensis KMM 6221, DSM 17526 1.0 Echvi_2067 DNA repair protein RecN 1.0 Echvi_0044 protein RecA 0.64 16
Pontibacter actiniarum KMM 6156, DSM 19842 0.49 CA264_13235 DNA repair protein RecN 0.86 CA264_19695 DNA recombination/repair protein RecA — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.40 ABZR88_RS06580 DNA repair protein RecN 0.77 ABZR88_RS16740 recombinase RecA 0.47 3
Parabacteroides merdae CL09T00C40 0.39 HMPREF1078_RS02000 DNA repair protein RecN 0.70 HMPREF1078_RS00095 recombinase RecA low > 61
Phocaeicola dorei CL03T12C01 0.39 ABI39_RS14500 DNA repair protein RecN 0.69 ABI39_RS11930 recombinase RecA low > 72
Phocaeicola vulgatus CL09T03C04 0.39 HMPREF1058_RS18225 DNA repair protein RecN 0.69 HMPREF1058_RS15965 recombinase RecA 0.72 5
Bacteroides stercoris CC31F 0.38 HMPREF1181_RS10900 DNA repair protein RecN 0.68 HMPREF1181_RS11910 recombinase RecA low > 56
Bacteroides thetaiotaomicron VPI-5482 0.37 BT1361 DNA repair protein recN (Recombination protein N) (NCBI ptt file) 0.66 BT4610 RecA (NCBI ptt file) low > 81
Pedobacter sp. GW460-11-11-14-LB5 0.36 CA265_RS14855 DNA repair protein RecN 0.76 CA265_RS00600 recombinase RecA 0.63 13
Bacteroides ovatus ATCC 8483 0.36 BACOVA_00200 DNA repair protein RecN 0.66 BACOVA_05402 RecA protein 0.41 84
Marinobacter adhaerens HP15 0.29 HP15_3084 DNA repair protein RecN 0.61 HP15_1048 recombinase A low > 73
Vibrio cholerae E7946 ATCC 55056 0.28 CSW01_04395 DNA repair protein RecN 0.62 CSW01_02875 DNA recombination/repair protein RecA 0.62 1
Pseudomonas sp. S08-1 0.27 OH686_17050 DNA repair protein RecN 0.63 OH686_18205 protein RecA low > 80
Shewanella oneidensis MR-1 0.27 SO3462 recN DNA repair protein RecN (NCBI ptt file) 0.61 SO3430 recA recA protein (NCBI ptt file) 0.67 1
Shewanella amazonensis SB2B 0.27 Sama_1026 recombination and repair protein (RefSeq) 0.60 Sama_1046 recA recombinase A (RefSeq) 0.48 19
Pseudomonas simiae WCS417 0.27 PS417_24070 recombination and repair protein 0.61 PS417_05815 recombinase RecA 0.42 10
Shewanella sp. ANA-3 0.26 Shewana3_1104 recombination and repair protein (RefSeq) 0.60 Shewana3_1126 recA recombinase A (RefSeq) 0.61 61
Shewanella loihica PV-4 0.26 Shew_1196 recombination and repair protein (RefSeq) 0.60 Shew_1215 recA recombinase A (RefSeq) low > 60
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_5106 DNA repair protein RecN 0.61 PfGW456L13_4668 RecA protein 0.29 65
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_3370 DNA repair protein RecN 0.61 Pf6N2E2_2993 RecA protein — —
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS25910 DNA repair protein RecN 0.61 PFLU_RS05885 recombinase RecA low > 109
Pseudomonas fluorescens FW300-N1B4 0.26 Pf1N1B4_1178 DNA repair protein RecN 0.61 Pf1N1B4_3143 RecA protein 0.23 66
Pseudomonas fluorescens SBW25 0.26 PFLU_RS25910 DNA repair protein RecN 0.61 PFLU_RS05885 recombinase RecA low > 109
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_4197 DNA replication and repair protein RecN 0.61 Psyr_1378 RecA protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_4197 DNA replication and repair protein RecN 0.61 Psyr_1378 RecA protein 0.49 11
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_05660 DNA repair protein RecN 0.60 AO353_16805 recombinase RecA 0.37 30
Pseudomonas stutzeri RCH2 0.25 Psest_0962 DNA repair protein RecN 0.63 Psest_2872 protein RecA 0.39 13
Rahnella sp. WP5 0.25 EX31_RS21760 DNA repair protein RecN 0.60 EX31_RS07800 recombinase RecA low > 89
Pseudomonas sp. RS175 0.25 PFR28_00071 DNA repair protein RecN 0.61 PFR28_00472 Protein RecA low > 88
Dickeya dadantii 3937 0.25 DDA3937_RS04325 DNA repair protein RecN 0.61 DDA3937_RS16245 recombinase RecA low > 74
Pseudomonas fluorescens FW300-N2C3 0.25 AO356_07510 DNA repair protein RecN 0.61 AO356_05670 recombinase RecA 0.33 37
Fusobacterium nucleatum SB010 0.25 HUW76_08055 DNA repair protein RecN 0.54 HUW76_07355 recombinase RecA low > 35
Sinorhizobium meliloti 1021 0.25 SMc01877 DNA repair protein 0.69 SMc00760 recombinase A 0.67 5
Dickeya dianthicola 67-19 0.24 HGI48_RS04320 DNA repair protein RecN 0.60 HGI48_RS16355 recombinase RecA low > 71
Dickeya dianthicola ME23 0.24 DZA65_RS04235 DNA repair protein RecN 0.60 DZA65_RS17450 recombinase RecA — —
Pseudomonas putida KT2440 0.24 PP_4729 factor used in recombination and DNA repair 0.62 PP_1629 Protein RecA 0.12 92
Pectobacterium carotovorum WPP14 0.24 HER17_RS17420 DNA repair protein RecN 0.60 HER17_RS05045 recombinase RecA 0.73 1
Pantoea sp. MT58 0.24 IAI47_04810 DNA repair protein RecN 0.62 IAI47_04300 recombinase RecA low > 76
Acidovorax sp. GW101-3H11 0.24 Ac3H11_3460 DNA repair protein RecN 0.61 Ac3H11_1255 RecA protein — —
Escherichia coli ECRC98 0.24 JDDGAC_24810 recN DNA repair protein RecN 0.60 JDDGAC_24370 recA recombinase RecA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF4162 DNA repair protein RecN 0.60 GFF4693 RecA protein — —
Enterobacter sp. TBS_079 0.24 MPMX20_03486 DNA repair protein RecN 0.60 MPMX20_03580 Protein RecA low > 85
Escherichia coli ECRC99 0.24 KEDOAH_07075 recN DNA repair protein RecN 0.60 KEDOAH_07430 recA recombinase RecA — —
Escherichia coli ECRC101 0.24 OKFHMN_21145 recN DNA repair protein RecN 0.60 OKFHMN_20705 recA recombinase RecA — —
Escherichia coli ECRC101 0.24 MCAODC_11670 recN DNA repair protein RecN 0.60 MCAODC_11230 recA recombinase RecA — —
Escherichia coli ECRC102 0.24 NIAGMN_18915 recN DNA repair protein RecN 0.60 NIAGMN_18475 recA recombinase RecA — —
Escherichia coli Nissle 1917 0.24 ECOLIN_RS14775 DNA repair protein RecN 0.60 ECOLIN_RS15060 recombinase RecA — —
Escherichia coli BW25113 0.24 b2616 recN recombination and repair protein (NCBI) 0.60 b2699 recA recombinase A (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_01091 DNA repair protein RecN 0.60 OHPLBJKB_01035 Protein RecA low > 73
Escherichia coli ECRC62 0.24 BNILDI_11620 recN DNA repair protein RecN 0.60 BNILDI_11105 recA recombinase RecA — —
Escherichia coli ECOR27 0.24 NOLOHH_12815 recN DNA repair protein RecN 0.60 NOLOHH_12545 recA recombinase RecA — —
Bosea sp. OAE506 0.24 ABIE41_RS12645 DNA repair protein RecN 0.63 ABIE41_RS13335 recombinase RecA 0.77 4
Klebsiella michiganensis M5al 0.23 BWI76_RS21560 DNA repair protein RecN 0.60 BWI76_RS22180 recombinase RecA — —
Castellaniella sp019104865 MT123 0.23 ABCV34_RS07470 DNA repair protein RecN 0.64 ABCV34_RS04460 recombinase RecA low > 48
Xanthomonas campestris pv. campestris strain 8004 0.23 Xcc-8004.3431.1 DNA repair protein RecN 0.60 Xcc-8004.3111.1 RecA protein — —
Escherichia fergusonii Becca 0.23 EFB2_01277 DNA repair protein RecN 0.60 EFB2_01225 Protein RecA low > 86
Herbaspirillum seropedicae SmR1 0.23 HSERO_RS03060 DNA repair protein 0.62 HSERO_RS03270 protein RecA low > 78
Serratia liquefaciens MT49 0.23 IAI46_19635 DNA repair protein RecN 0.60 IAI46_03840 recombinase RecA 0.59 2
Escherichia coli BL21 0.23 ECD_02504 recombination and repair protein 0.60 ECD_02549 DNA recombination and repair protein; ssDNA-dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP-dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor low > 60
Escherichia coli ECOR38 0.23 HEPCGN_20265 recN DNA repair protein RecN 0.60 HEPCGN_19900 recA recombinase RecA low > 85
Ralstonia solanacearum GMI1000 0.23 RS_RS13275 DNA repair protein RecN 0.61 RS_RS02760 DNA recombination/repair protein RecA — —
Ralstonia solanacearum UW163 0.23 UW163_RS08210 DNA repair protein RecN 0.62 UW163_RS01625 recombinase RecA — —
Ralstonia solanacearum IBSBF1503 0.23 RALBFv3_RS05415 DNA repair protein RecN 0.62 RALBFv3_RS12010 recombinase RecA 0.54 11
Enterobacter asburiae PDN3 0.23 EX28DRAFT_2719 DNA repair protein RecN 0.60 EX28DRAFT_2785 protein RecA — —
Agrobacterium fabrum C58 0.23 Atu2083 DNA repair protein RecN 0.67 Atu1874 RecA protein 0.58 3
Alteromonas macleodii MIT1002 0.23 MIT1002_01443 Recombination protein N 0.63 MIT1002_00955 Recombinase A low > 70
Erwinia tracheiphila SCR3 0.23 LU632_RS16985 recN DNA repair protein RecN 0.62 LU632_RS15735 recA recombinase RecA 0.51 14
Ralstonia solanacearum PSI07 0.23 RPSI07_RS11890 DNA repair protein RecN 0.62 RPSI07_RS21260 recombinase RecA low > 81
Kangiella aquimarina DSM 16071 0.23 B158DRAFT_0601 DNA replication and repair protein RecN 0.65 B158DRAFT_1531 protein RecA 0.81 5
Dyella japonica UNC79MFTsu3.2 0.22 ABZR86_RS05665 DNA repair protein RecN 0.60 ABZR86_RS00660 recombinase RecA 0.87 3
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS05910 DNA repair protein 0.60 RR42_RS03080 recombinase RecA 0.62 6
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS01065 DNA repair protein RecN 0.62 ABZR87_RS07965 recombinase RecA 0.25 49
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF829 DNA repair protein RecN 0.60 GFF2500 RecA protein low > 90
Lysobacter sp. OAE881 0.22 ABIE51_RS11655 DNA repair protein RecN 0.59 ABIE51_RS07800 recombinase RecA low > 62
Rhodanobacter sp. FW510-T8 0.22 OKGIIK_07340 recN DNA repair protein RecN 0.63 OKGIIK_03740 recA recombinase RecA low > 52
Azospirillum sp. SherDot2 0.21 MPMX19_01601 DNA repair protein RecN 0.69 MPMX19_00869 Protein RecA — —
Synechococcus elongatus PCC 7942 0.21 Synpcc7942_1779 recN DNA repair protein RecN 0.59 Synpcc7942_0348 recA recombinase A — —
Rhodanobacter denitrificans FW104-10B01 0.21 LRK54_RS17960 DNA repair protein RecN 0.63 LRK54_RS14980 recombinase RecA 0.61 1
Rhodanobacter denitrificans MT42 0.21 LRK55_RS17815 DNA repair protein RecN 0.63 LRK55_RS14695 recombinase RecA low > 63
Sphingomonas koreensis DSMZ 15582 0.21 Ga0059261_1026 DNA repair protein RecN 0.67 Ga0059261_0204 protein RecA 0.60 2
Azospirillum brasilense Sp245 0.21 AZOBR_RS12395 DNA repair protein RecN 0.68 AZOBR_RS11095 recombinase RecA — —
Rhodopseudomonas palustris CGA009 0.21 TX73_018240 DNA repair protein RecN 0.68 TX73_019940 recombinase RecA — —
Variovorax sp. SCN45 0.20 GFF2357 DNA repair protein RecN 0.61 GFF5390 RecA protein low > 127
Magnetospirillum magneticum AMB-1 0.20 AMB_RS19520 DNA repair protein RecN 0.66 AMB_RS03205 DNA recombination/repair protein RecA — —
Rhodospirillum rubrum S1H 0.20 Rru_A0940 DNA repair protein RecN (NCBI) 0.68 Rru_A2819 RecA DNA recombination protein (NCBI) — —
Dechlorosoma suillum PS 0.20 Dsui_3072 DNA repair protein RecN 0.61 Dsui_0707 protein RecA 0.85 7
Paraburkholderia sabiae LMG 24235 0.20 QEN71_RS26535 DNA repair protein RecN 0.64 QEN71_RS02335 recombinase RecA — —
Bifidobacterium breve UCC2003 0.19 BBR_RS14030 DNA repair protein RecN 0.68 BBR_RS16530 recombinase RecA 0.66 4
Phaeobacter inhibens DSM 17395 0.19 PGA1_c09720 DNA repair protein RecN 0.64 PGA1_c15260 protein recA (recombinase A) 0.59 1
Paraburkholderia bryophila 376MFSha3.1 0.18 H281DRAFT_04692 DNA replication and repair protein RecN 0.64 H281DRAFT_04208 RecA protein 0.34 63
Acinetobacter radioresistens SK82 0.18 MPMX26_00239 DNA repair protein RecN 0.65 MPMX26_01308 Protein RecA 0.32 21
Burkholderia phytofirmans PsJN 0.18 BPHYT_RS03560 DNA repair protein 0.64 BPHYT_RS16360 recombinase RecA — —
Paraburkholderia graminis OAS925 0.18 ABIE53_000856 DNA repair protein RecN (Recombination protein N) 0.64 ABIE53_003448 recombination protein RecA 0.39 4
Caulobacter crescentus NA1000 Δfur 0.17 CCNA_02062 DNA repair protein recN 0.63 CCNA_01141 RecA protein — —
Caulobacter crescentus NA1000 0.17 CCNA_02062 DNA repair protein recN 0.63 CCNA_01141 RecA protein 0.85 3
Dinoroseobacter shibae DFL-12 0.17 Dshi_2413 DNA repair protein RecN (RefSeq) 0.63 Dshi_1643 recA protein (RefSeq) 0.45 9
Desulfovibrio vulgaris Hildenborough JW710 0.17 DVU2463 recN DNA repair protein RecN (TIGR) 0.61 DVU1090 recA recA protein (TIGR) 0.30 52
Brevundimonas sp. GW460-12-10-14-LB2 0.16 A4249_RS02620 DNA repair protein RecN 0.65 A4249_RS12615 recombinase RecA low > 48
Desulfovibrio vulgaris Miyazaki F 0.16 DvMF_0923 SMC domain protein (RefSeq) 0.60 DvMF_0876 recA recombinase A (RefSeq) 0.63 3

Not shown: 1 genomes with orthologs for Echvi_2067 only; 2 genomes with orthologs for Echvi_0044 only