Conservation of cofitness between Dsui_0707 and Dsui_3072 in Dechlorosoma suillum PS

98 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dechlorosoma suillum PS 1.0 Dsui_0707 protein RecA 1.0 Dsui_3072 DNA repair protein RecN 0.85 4
Rhodanobacter denitrificans FW104-10B01 0.81 LRK54_RS14980 recombinase RecA 0.34 LRK54_RS17960 DNA repair protein RecN 0.61 5
Rhodanobacter denitrificans MT42 0.81 LRK55_RS14695 recombinase RecA 0.34 LRK55_RS17815 DNA repair protein RecN low > 63
Rhodanobacter sp. FW510-T8 0.81 OKGIIK_03740 recA recombinase RecA 0.35 OKGIIK_07340 recN DNA repair protein RecN low > 52
Paraburkholderia sabiae LMG 24235 0.81 QEN71_RS02335 recombinase RecA 0.50 QEN71_RS26535 DNA repair protein RecN — —
Paraburkholderia graminis OAS925 0.79 ABIE53_003448 recombination protein RecA 0.48 ABIE53_000856 DNA repair protein RecN (Recombination protein N) low > 113
Burkholderia phytofirmans PsJN 0.79 BPHYT_RS16360 recombinase RecA 0.48 BPHYT_RS03560 DNA repair protein — —
Paraburkholderia bryophila 376MFSha3.1 0.79 H281DRAFT_04208 RecA protein 0.48 H281DRAFT_04692 DNA replication and repair protein RecN low > 103
Kangiella aquimarina DSM 16071 0.78 B158DRAFT_1531 protein RecA 0.40 B158DRAFT_0601 DNA replication and repair protein RecN 0.81 1
Cupriavidus basilensis FW507-4G11 0.78 RR42_RS03080 recombinase RecA 0.47 RR42_RS05910 DNA repair protein 0.62 2
Dyella japonica UNC79MFTsu3.2 0.78 ABZR86_RS00660 recombinase RecA 0.36 ABZR86_RS05665 DNA repair protein RecN 0.87 1
Castellaniella sp019104865 MT123 0.77 ABCV34_RS04460 recombinase RecA 0.44 ABCV34_RS07470 DNA repair protein RecN 0.35 29
Alteromonas macleodii MIT1002 0.77 MIT1002_00955 Recombinase A 0.34 MIT1002_01443 Recombination protein N low > 70
Ralstonia sp. UNC404CL21Col 0.75 ABZR87_RS07965 recombinase RecA 0.48 ABZR87_RS01065 DNA repair protein RecN low > 80
Acinetobacter radioresistens SK82 0.75 MPMX26_01308 Protein RecA 0.32 MPMX26_00239 DNA repair protein RecN low > 36
Ralstonia solanacearum IBSBF1503 0.75 RALBFv3_RS12010 recombinase RecA 0.50 RALBFv3_RS05415 DNA repair protein RecN 0.54 25
Ralstonia solanacearum UW163 0.75 UW163_RS01625 recombinase RecA 0.50 UW163_RS08210 DNA repair protein RecN — —
Ralstonia solanacearum PSI07 0.75 RPSI07_RS21260 recombinase RecA 0.49 RPSI07_RS11890 DNA repair protein RecN low > 81
Pseudomonas putida KT2440 0.75 PP_1629 Protein RecA 0.36 PP_4729 factor used in recombination and DNA repair low > 96
Ralstonia solanacearum GMI1000 0.75 RS_RS02760 DNA recombination/repair protein RecA 0.49 RS_RS13275 DNA repair protein RecN — —
Variovorax sp. SCN45 0.75 GFF5390 RecA protein 0.42 GFF2357 DNA repair protein RecN low > 127
Pseudomonas stutzeri RCH2 0.75 Psest_2872 protein RecA 0.37 Psest_0962 DNA repair protein RecN 0.39 3
Acidovorax sp. GW101-3H11 0.75 Ac3H11_1255 RecA protein 0.41 Ac3H11_3460 DNA repair protein RecN — —
Pseudomonas fluorescens SBW25-INTG 0.74 PFLU_RS05885 recombinase RecA 0.37 PFLU_RS25910 DNA repair protein RecN low > 109
Pseudomonas fluorescens SBW25 0.74 PFLU_RS05885 recombinase RecA 0.37 PFLU_RS25910 DNA repair protein RecN low > 109
Pseudomonas simiae WCS417 0.74 PS417_05815 recombinase RecA 0.37 PS417_24070 recombination and repair protein 0.42 37
Xanthomonas campestris pv. campestris strain 8004 0.74 Xcc-8004.3111.1 RecA protein 0.31 Xcc-8004.3431.1 DNA repair protein RecN — —
Lysobacter sp. OAE881 0.74 ABIE51_RS07800 recombinase RecA 0.31 ABIE51_RS11655 DNA repair protein RecN low > 62
Marinobacter adhaerens HP15 0.74 HP15_1048 recombinase A 0.42 HP15_3084 DNA repair protein RecN 0.25 38
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_1378 RecA protein 0.38 Psyr_4197 DNA replication and repair protein RecN low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_1378 RecA protein 0.38 Psyr_4197 DNA replication and repair protein RecN 0.49 4
Shewanella oneidensis MR-1 0.74 SO3430 recA recA protein (NCBI ptt file) 0.39 SO3462 recN DNA repair protein RecN (NCBI ptt file) 0.67 1
Herbaspirillum seropedicae SmR1 0.74 HSERO_RS03270 protein RecA 0.52 HSERO_RS03060 DNA repair protein low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.73 GFF2500 RecA protein 0.43 GFF829 DNA repair protein RecN low > 90
Pseudomonas sp. S08-1 0.73 OH686_18205 protein RecA 0.40 OH686_17050 DNA repair protein RecN low > 80
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_3143 RecA protein 0.38 Pf1N1B4_1178 DNA repair protein RecN low > 87
Erwinia tracheiphila SCR3 0.73 LU632_RS15735 recA recombinase RecA 0.34 LU632_RS16985 recN DNA repair protein RecN 0.51 7
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_16805 recombinase RecA 0.38 AO353_05660 DNA repair protein RecN 0.37 16
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_4668 RecA protein 0.38 PfGW456L13_5106 DNA repair protein RecN low > 87
Shewanella sp. ANA-3 0.73 Shewana3_1126 recA recombinase A (RefSeq) 0.39 Shewana3_1104 recombination and repair protein (RefSeq) 0.61 50
Pectobacterium carotovorum WPP14 0.73 HER17_RS05045 recombinase RecA 0.36 HER17_RS17420 DNA repair protein RecN 0.73 12
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF4693 RecA protein 0.37 GFF4162 DNA repair protein RecN — —
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_05670 recombinase RecA 0.37 AO356_07510 DNA repair protein RecN 0.33 68
Escherichia coli ECRC102 0.73 NIAGMN_18475 recA recombinase RecA 0.36 NIAGMN_18915 recN DNA repair protein RecN — —
Escherichia coli ECRC101 0.73 OKFHMN_20705 recA recombinase RecA 0.36 OKFHMN_21145 recN DNA repair protein RecN — —
Dickeya dadantii 3937 0.73 DDA3937_RS16245 recombinase RecA 0.36 DDA3937_RS04325 DNA repair protein RecN low > 74
Escherichia coli BL21 0.73 ECD_02549 DNA recombination and repair protein; ssDNA-dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP-dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor 0.36 ECD_02504 recombination and repair protein low > 60
Escherichia coli ECRC98 0.73 JDDGAC_24370 recA recombinase RecA 0.36 JDDGAC_24810 recN DNA repair protein RecN — —
Klebsiella michiganensis M5al 0.73 BWI76_RS22180 recombinase RecA 0.37 BWI76_RS21560 DNA repair protein RecN — —
Escherichia coli ECOR38 0.73 HEPCGN_19900 recA recombinase RecA 0.36 HEPCGN_20265 recN DNA repair protein RecN low > 85
Escherichia coli ECRC99 0.73 KEDOAH_07430 recA recombinase RecA 0.36 KEDOAH_07075 recN DNA repair protein RecN — —
Vibrio cholerae E7946 ATCC 55056 0.73 CSW01_02875 DNA recombination/repair protein RecA 0.39 CSW01_04395 DNA repair protein RecN 0.62 4
Escherichia coli Nissle 1917 0.73 ECOLIN_RS15060 recombinase RecA 0.36 ECOLIN_RS14775 DNA repair protein RecN — —
Escherichia coli BW25113 0.73 b2699 recA recombinase A (NCBI) 0.36 b2616 recN recombination and repair protein (NCBI) low > 76
Pseudomonas sp. RS175 0.73 PFR28_00472 Protein RecA 0.38 PFR28_00071 DNA repair protein RecN low > 88
Escherichia coli ECRC62 0.73 BNILDI_11105 recA recombinase RecA 0.36 BNILDI_11620 recN DNA repair protein RecN — —
Escherichia fergusonii Becca 0.73 EFB2_01225 Protein RecA 0.36 EFB2_01277 DNA repair protein RecN low > 86
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_2993 RecA protein 0.39 Pf6N2E2_3370 DNA repair protein RecN — —
Escherichia coli ECOR27 0.73 NOLOHH_12545 recA recombinase RecA 0.36 NOLOHH_12815 recN DNA repair protein RecN — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_01035 Protein RecA 0.36 OHPLBJKB_01091 DNA repair protein RecN low > 73
Escherichia coli ECRC101 0.73 MCAODC_11230 recA recombinase RecA 0.36 MCAODC_11670 recN DNA repair protein RecN — —
Dickeya dianthicola 67-19 0.72 HGI48_RS16355 recombinase RecA 0.36 HGI48_RS04320 DNA repair protein RecN low > 71
Pantoea sp. MT58 0.72 IAI47_04300 recombinase RecA 0.38 IAI47_04810 DNA repair protein RecN low > 76
Dickeya dianthicola ME23 0.72 DZA65_RS17450 recombinase RecA 0.36 DZA65_RS04235 DNA repair protein RecN — —
Rahnella sp. WP5 0.72 EX31_RS07800 recombinase RecA 0.37 EX31_RS21760 DNA repair protein RecN low > 89
Magnetospirillum magneticum AMB-1 0.72 AMB_RS03205 DNA recombination/repair protein RecA 0.31 AMB_RS19520 DNA repair protein RecN — —
Rhodopseudomonas palustris CGA009 0.72 TX73_019940 recombinase RecA 0.25 TX73_018240 DNA repair protein RecN — —
Enterobacter sp. TBS_079 0.72 MPMX20_03580 Protein RecA 0.38 MPMX20_03486 DNA repair protein RecN low > 85
Enterobacter asburiae PDN3 0.72 EX28DRAFT_2785 protein RecA 0.37 EX28DRAFT_2719 DNA repair protein RecN — —
Azospirillum brasilense Sp245 0.72 AZOBR_RS11095 recombinase RecA 0.26 AZOBR_RS12395 DNA repair protein RecN — —
Serratia liquefaciens MT49 0.72 IAI46_03840 recombinase RecA 0.37 IAI46_19635 DNA repair protein RecN 0.59 24
Brevundimonas sp. GW460-12-10-14-LB2 0.71 A4249_RS12615 recombinase RecA 0.21 A4249_RS02620 DNA repair protein RecN low > 48
Shewanella amazonensis SB2B 0.71 Sama_1046 recA recombinase A (RefSeq) 0.39 Sama_1026 recombination and repair protein (RefSeq) 0.48 11
Shewanella loihica PV-4 0.71 Shew_1215 recA recombinase A (RefSeq) 0.37 Shew_1196 recombination and repair protein (RefSeq) 0.26 32
Azospirillum sp. SherDot2 0.71 MPMX19_00869 Protein RecA 0.26 MPMX19_01601 DNA repair protein RecN — —
Phaeobacter inhibens DSM 17395 0.71 PGA1_c15260 protein recA (recombinase A) 0.25 PGA1_c09720 DNA repair protein RecN 0.59 3
Agrobacterium fabrum C58 0.71 Atu1874 RecA protein 0.31 Atu2083 DNA repair protein RecN 0.58 6
Rhodospirillum rubrum S1H 0.70 Rru_A2819 RecA DNA recombination protein (NCBI) 0.24 Rru_A0940 DNA repair protein RecN (NCBI) — —
Sinorhizobium meliloti 1021 0.70 SMc00760 recombinase A 0.31 SMc01877 DNA repair protein 0.67 1
Sphingomonas koreensis DSMZ 15582 0.69 Ga0059261_0204 protein RecA 0.27 Ga0059261_1026 DNA repair protein RecN 0.60 5
Caulobacter crescentus NA1000 Δfur 0.68 CCNA_01141 RecA protein 0.21 CCNA_02062 DNA repair protein recN — —
Caulobacter crescentus NA1000 0.68 CCNA_01141 RecA protein 0.21 CCNA_02062 DNA repair protein recN 0.85 1
Bosea sp. OAE506 0.68 ABIE41_RS13335 recombinase RecA 0.25 ABIE41_RS12645 DNA repair protein RecN 0.77 2
Bifidobacterium breve UCC2003 0.67 BBR_RS16530 recombinase RecA 0.15 BBR_RS14030 DNA repair protein RecN low > 34
Pontibacter actiniarum KMM 6156, DSM 19842 0.65 CA264_19695 DNA recombination/repair protein RecA 0.21 CA264_13235 DNA repair protein RecN — —
Dinoroseobacter shibae DFL-12 0.65 Dshi_1643 recA protein (RefSeq) 0.22 Dshi_2413 DNA repair protein RecN (RefSeq) 0.45 13
Desulfovibrio vulgaris Hildenborough JW710 0.64 DVU1090 recA recA protein (TIGR) 0.19 DVU2463 recN DNA repair protein RecN (TIGR) low > 55
Mucilaginibacter yixingensis YX-36 DSM 26809 0.64 ABZR88_RS16740 recombinase RecA 0.26 ABZR88_RS06580 DNA repair protein RecN 0.47 16
Phocaeicola vulgatus CL09T03C04 0.64 HMPREF1058_RS15965 recombinase RecA 0.24 HMPREF1058_RS18225 DNA repair protein RecN 0.72 3
Phocaeicola dorei CL03T12C01 0.64 ABI39_RS11930 recombinase RecA 0.24 ABI39_RS14500 DNA repair protein RecN low > 72
Pedobacter sp. GW460-11-11-14-LB5 0.63 CA265_RS00600 recombinase RecA 0.23 CA265_RS14855 DNA repair protein RecN 0.63 10
Desulfovibrio vulgaris Miyazaki F 0.63 DvMF_0876 recA recombinase A (RefSeq) 0.16 DvMF_0923 SMC domain protein (RefSeq) 0.63 1
Parabacteroides merdae CL09T00C40 0.63 HMPREF1078_RS00095 recombinase RecA 0.27 HMPREF1078_RS02000 DNA repair protein RecN low > 61
Bacteroides stercoris CC31F 0.63 HMPREF1181_RS11910 recombinase RecA 0.24 HMPREF1181_RS10900 DNA repair protein RecN low > 56
Bacteroides ovatus ATCC 8483 0.63 BACOVA_05402 RecA protein 0.24 BACOVA_00200 DNA repair protein RecN 0.41 9
Bacteroides thetaiotaomicron VPI-5482 0.62 BT4610 RecA (NCBI ptt file) 0.25 BT1361 DNA repair protein recN (Recombination protein N) (NCBI ptt file) low > 81
Echinicola vietnamensis KMM 6221, DSM 17526 0.61 Echvi_0044 protein RecA 0.22 Echvi_2067 DNA repair protein RecN 0.64 2
Synechococcus elongatus PCC 7942 0.58 Synpcc7942_0348 recA recombinase A 0.21 Synpcc7942_1779 recN DNA repair protein RecN — —
Fusobacterium nucleatum SB010 0.57 HUW76_07355 recombinase RecA 0.24 HUW76_08055 DNA repair protein RecN low > 35

Not shown: 2 genomes with orthologs for Dsui_0707 only; 1 genomes with orthologs for Dsui_3072 only