| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Dechlorosoma suillum PS | 1.0 | Dsui_1622 | | excinuclease ABC, A subunit | 1.0 | Dsui_1811 | | recombination protein RecR | 0.94 | 4 |
| Ralstonia sp. UNC404CL21Col | 0.79 | ABZR87_RS07120 | | excinuclease ABC subunit UvrA | 0.70 | ABZR87_RS10810 | | recombination mediator RecR | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.78 | RALBFv3_RS11235 | | excinuclease ABC subunit UvrA | 0.67 | RALBFv3_RS15170 | | recombination protein RecR | low | > 76 |
| Ralstonia solanacearum UW163 | 0.78 | UW163_RS02345 | | excinuclease ABC subunit UvrA | 0.67 | UW163_RS12640 | | recombination protein RecR | — | — |
| Ralstonia solanacearum GMI1000 | 0.78 | RS_RS02080 | | excinuclease ABC subunit UvrA | 0.67 | RS_RS05980 | | recombination protein RecR | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.78 | RPSI07_RS22065 | | excinuclease ABC subunit UvrA | 0.67 | RPSI07_RS18205 | | recombination protein RecR | low | > 81 |
| Paraburkholderia sabiae LMG 24235 | 0.77 | QEN71_RS01825 | | excinuclease ABC subunit UvrA | 0.70 | QEN71_RS22285 | | recombination mediator RecR | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.77 | BPHYT_RS02970 | | excinuclease ABC subunit A | 0.69 | BPHYT_RS09070 | | recombination protein RecR | low | > 109 |
| Herbaspirillum seropedicae SmR1 | 0.77 | HSERO_RS19810 | | excinuclease ABC subunit A | 0.68 | HSERO_RS18355 | | recombinase RecR | 0.66 | 4 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.77 | H281DRAFT_01913 | | Excinuclease ABC subunit A | 0.69 | H281DRAFT_00834 | | DNA replication and repair protein RecR | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.77 | ABIE53_000732 | | excinuclease ABC subunit A | 0.70 | ABIE53_002048 | | recombination protein RecR | low | > 113 |
| Cupriavidus basilensis FW507-4G11 | 0.77 | RR42_RS02145 | | excinuclease ABC subunit A | 0.72 | RR42_RS13270 | | recombination protein RecR | 0.67 | 7 |
| Pseudomonas stutzeri RCH2 | 0.75 | Psest_3576 | | excinuclease ABC, A subunit | 0.53 | Psest_2545 | | recombination protein RecR | 0.71 | 6 |
| Pseudomonas putida KT2440 | 0.75 | PP_0483 | | excinuclease (uvrABC system protein A) | 0.51 | PP_4267 | | Recombination protein RecR | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.75 | AO353_06855 | | ABC-ATPase UvrA | 0.52 | AO353_00675 | | recombination protein RecR | 0.56 | 11 |
| Pseudomonas sp. S08-1 | 0.75 | OH686_15495 | | excinuclease ABC subunit A | 0.52 | OH686_02385 | | recombination protein RecR | low | > 80 |
| Pseudomonas simiae WCS417 | 0.75 | PS417_25395 | | excinuclease ABC subunit A | 0.52 | PS417_20800 | | recombination protein RecR | 0.62 | 4 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.75 | Psyr_4520 | | Excinuclease ABC subunit A | 0.51 | Psyr_3396 | | DNA replication and repair protein RecR | 0.83 | 4 |
| Pseudomonas fluorescens GW456-L13 | 0.75 | PfGW456L13_1283 | | Excinuclease ABC subunit A | 0.53 | PfGW456L13_4074 | | Recombination protein RecR | 0.57 | 4 |
| Pseudomonas syringae pv. syringae B728a | 0.75 | Psyr_4520 | | Excinuclease ABC subunit A | 0.51 | Psyr_3396 | | DNA replication and repair protein RecR | 0.74 | 4 |
| Pseudomonas fluorescens SBW25-INTG | 0.75 | PFLU_RS27025 | | excinuclease ABC subunit UvrA | 0.52 | PFLU_RS22415 | | recombination protein RecR | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.75 | PFLU_RS27025 | | excinuclease ABC subunit UvrA | 0.52 | PFLU_RS22415 | | recombination protein RecR | low | > 109 |
| Pseudomonas sp. RS175 | 0.75 | PFR28_03974 | | UvrABC system protein A | 0.53 | PFR28_01077 | | Recombination protein RecR | 0.29 | 61 |
| Pseudomonas fluorescens FW300-N1B4 | 0.74 | Pf1N1B4_2611 | | Excinuclease ABC subunit A | 0.52 | Pf1N1B4_3864 | | Recombination protein RecR | 0.67 | 2 |
| Pseudomonas fluorescens FW300-N2C3 | 0.74 | AO356_14785 | | ABC-ATPase UvrA | 0.52 | AO356_02495 | | recombination protein RecR | 0.72 | 7 |
| Pseudomonas fluorescens FW300-N2E2 | 0.74 | Pf6N2E2_4888 | | Excinuclease ABC subunit A | 0.52 | Pf6N2E2_2325 | | Recombination protein RecR | 0.71 | 5 |
| Pectobacterium carotovorum WPP14 | 0.73 | HER17_RS03550 | | excinuclease ABC subunit UvrA | 0.52 | HER17_RS15695 | | recombination mediator RecR | low | > 75 |
| Marinobacter adhaerens HP15 | 0.72 | HP15_406 | | excinuclease ABC, ATPase subunit (A) | 0.53 | HP15_1883 | | recombination protein RecR | — | — |
| Dickeya dianthicola 67-19 | 0.72 | HGI48_RS17610 | | excinuclease ABC subunit UvrA | 0.55 | HGI48_RS05840 | | recombination protein RecR | — | — |
| Pantoea sp. MT58 | 0.72 | IAI47_17815 | | excinuclease ABC subunit UvrA | 0.54 | IAI47_14465 | | recombination protein RecR | low | > 76 |
| Enterobacter asburiae PDN3 | 0.72 | EX28DRAFT_4246 | | excinuclease ABC, A subunit | 0.53 | EX28DRAFT_2485 | | DNA replication and repair protein RecR | low | > 76 |
| Dickeya dianthicola ME23 | 0.72 | DZA65_RS18735 | | excinuclease ABC subunit UvrA | 0.55 | DZA65_RS06165 | | recombination protein RecR | low | > 75 |
| Rahnella sp. WP5 | 0.72 | EX31_RS11990 | | excinuclease ABC subunit UvrA | 0.53 | EX31_RS22525 | | recombination protein RecR | low | > 89 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.72 | GFF1429 | | Excinuclease ABC subunit A | 0.53 | GFF4390 | | Recombination protein RecR | 0.73 | 2 |
| Dickeya dadantii 3937 | 0.72 | DDA3937_RS17605 | | excinuclease ABC subunit UvrA | 0.54 | DDA3937_RS05790 | | recombination protein RecR | low | > 74 |
| Escherichia coli Nissle 1917 | 0.72 | ECOLIN_RS23485 | | excinuclease ABC subunit UvrA | 0.53 | ECOLIN_RS02805 | | recombination mediator RecR | — | — |
| Serratia liquefaciens MT49 | 0.72 | IAI46_22905 | | excinuclease ABC subunit UvrA | 0.53 | IAI46_05240 | | recombination protein RecR | 0.50 | 11 |
| Escherichia coli ECRC99 | 0.72 | KEDOAH_15255 | uvrA | excinuclease ABC subunit UvrA | 0.53 | KEDOAH_19810 | recR | recombination mediator RecR | — | — |
| Escherichia fergusonii Becca | 0.72 | EFB2_04533 | | UvrABC system protein A | 0.53 | EFB2_03586 | | Recombination protein RecR | low | > 86 |
| Escherichia coli ECRC98 | 0.72 | JDDGAC_16530 | uvrA | excinuclease ABC subunit UvrA | 0.53 | JDDGAC_11805 | recR | recombination mediator RecR | — | — |
| Escherichia coli ECRC102 | 0.72 | NIAGMN_10740 | uvrA | excinuclease ABC subunit UvrA | 0.53 | NIAGMN_06210 | recR | recombination mediator RecR | — | — |
| Enterobacter sp. TBS_079 | 0.72 | MPMX20_00276 | | UvrABC system protein A | 0.53 | MPMX20_01074 | | Recombination protein RecR | 0.34 | 61 |
| Escherichia coli ECRC101 | 0.72 | MCAODC_03405 | uvrA | excinuclease ABC subunit UvrA | 0.53 | MCAODC_27380 | recR | recombination mediator RecR | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.72 | OHPLBJKB_03983 | | UvrABC system protein A | 0.53 | OHPLBJKB_03202 | | Recombination protein RecR | low | > 73 |
| Escherichia coli BW25113 | 0.72 | b4058 | uvrA | excinuclease ABC subunit A (NCBI) | 0.53 | b0472 | recR | recombination protein RecR (NCBI) | 0.76 | 4 |
| Escherichia coli ECRC62 | 0.72 | BNILDI_06380 | uvrA | excinuclease ABC subunit UvrA | 0.53 | BNILDI_22505 | recR | recombination mediator RecR | — | — |
| Escherichia coli ECOR27 | 0.72 | NOLOHH_05145 | uvrA | excinuclease ABC subunit UvrA | 0.53 | NOLOHH_01085 | recR | recombination mediator RecR | low | > 57 |
| Escherichia coli ECOR38 | 0.72 | HEPCGN_11510 | uvrA | excinuclease ABC subunit UvrA | 0.53 | HEPCGN_06770 | recR | recombination mediator RecR | low | > 85 |
| Escherichia coli ECRC101 | 0.72 | OKFHMN_12895 | uvrA | excinuclease ABC subunit UvrA | 0.53 | OKFHMN_08155 | recR | recombination mediator RecR | — | — |
| Kangiella aquimarina DSM 16071 | 0.72 | B158DRAFT_0885 | | excinuclease ABC, A subunit | 0.54 | B158DRAFT_2480 | | DNA replication and repair protein RecR | 0.76 | 5 |
| Escherichia coli BL21 | 0.72 | ECD_03930 | | ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC | 0.53 | ECD_00423 | | gap repair protein | 0.71 | 14 |
| Klebsiella michiganensis M5al | 0.71 | BWI76_RS01950 | | excinuclease ABC subunit A | 0.54 | BWI76_RS06830 | | recombination protein RecR | 0.19 | 91 |
| Erwinia tracheiphila SCR3 | 0.71 | LU632_RS23685 | uvrA | excinuclease ABC subunit UvrA | 0.55 | LU632_RS18105 | recR | recombination mediator RecR | low | > 74 |
| Vibrio cholerae E7946 ATCC 55056 | 0.71 | CSW01_02080 | | UvrABC system protein A | 0.55 | CSW01_05375 | | recombination protein RecR | low | > 62 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.71 | Xcc-8004.3830.1 | | Excinuclease ABC subunit A | 0.54 | Xcc-8004.4012.1 | | Recombination protein RecR | low | > 74 |
| Shewanella oneidensis MR-1 | 0.71 | SO4030 | uvrA | excinuclease ABC, A subunit (NCBI ptt file) | 0.52 | SO2015 | recR | recombination protein RecR (NCBI ptt file) | 0.60 | 3 |
| Shewanella sp. ANA-3 | 0.71 | Shewana3_3592 | | excinuclease ABC subunit A (RefSeq) | 0.52 | Shewana3_2444 | recR | recombination protein RecR (RefSeq) | 0.52 | 13 |
| Alteromonas macleodii MIT1002 | 0.70 | MIT1002_00179 | | Excinuclease ABC subunit A | 0.55 | MIT1002_02649 | | Recombination protein RecR | low | > 70 |
| Shewanella amazonensis SB2B | 0.70 | Sama_0514 | | excinuclease ABC, A subunit (RefSeq) | 0.53 | Sama_1312 | recR | recombination protein RecR (RefSeq) | 0.64 | 9 |
| Dyella japonica UNC79MFTsu3.2 | 0.70 | ABZR86_RS00910 | | excinuclease ABC subunit UvrA | 0.55 | ABZR86_RS06235 | | recombination mediator RecR | 0.75 | 17 |
| Variovorax sp. SCN45 | 0.70 | GFF4944 | | Excinuclease ABC subunit A | 0.60 | GFF1110 | | Recombination protein RecR | low | > 127 |
| Shewanella loihica PV-4 | 0.70 | Shew_0533 | | excinuclease ABC, A subunit (RefSeq) | 0.54 | Shew_2233 | | recombination protein RecR (RefSeq) | 0.51 | 32 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.70 | GFF2755 | | Excinuclease ABC subunit A | 0.57 | GFF4253 | | Recombination protein RecR | low | > 90 |
| Variovorax sp. OAS795 | 0.70 | ABID97_RS04340 | | excinuclease ABC subunit UvrA | 0.61 | ABID97_RS14700 | | recombination mediator RecR | low | > 91 |
| Rhodanobacter denitrificans FW104-10B01 | 0.69 | LRK54_RS15210 | | excinuclease ABC subunit UvrA | 0.55 | LRK54_RS01250 | | recombination mediator RecR | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.69 | LRK55_RS14925 | | excinuclease ABC subunit UvrA | 0.55 | LRK55_RS01020 | | recombination mediator RecR | low | > 63 |
| Rhodanobacter sp. FW510-T8 | 0.69 | OKGIIK_03980 | uvrA | excinuclease ABC subunit UvrA | 0.55 | OKGIIK_05655 | recR | recombination mediator RecR | low | > 52 |
| Acidovorax sp. GW101-3H11 | 0.69 | Ac3H11_4387 | | Excinuclease ABC subunit A | 0.56 | Ac3H11_473 | | Recombination protein RecR | 0.42 | 16 |
| Castellaniella sp019104865 MT123 | 0.65 | ABCV34_RS12715 | | excinuclease ABC subunit UvrA | 0.59 | ABCV34_RS15480 | | recombination mediator RecR | low | > 48 |
| Acinetobacter radioresistens SK82 | 0.65 | MPMX26_02892 | | UvrABC system protein A | 0.51 | MPMX26_01643 | | Recombination protein RecR | 0.37 | 22 |
| Azospirillum sp. SherDot2 | 0.62 | MPMX19_01152 | | UvrABC system protein A | 0.42 | MPMX19_02195 | | Recombination protein RecR | low | > 112 |
| Rhodospirillum rubrum S1H | 0.62 | Rru_A1752 | | Excinuclease ABC, A subunit (NCBI) | 0.41 | Rru_A3471 | | RecR protein (NCBI) | — | — |
| Caulobacter crescentus NA1000 | 0.61 | CCNA_02673 | | excinuclease ABC subunit A | 0.40 | CCNA_00270 | | Recombination protein recR | 0.90 | 3 |
| Caulobacter crescentus NA1000 Δfur | 0.61 | CCNA_02673 | | excinuclease ABC subunit A | 0.40 | CCNA_00270 | | Recombination protein recR | low | > 67 |
| Dinoroseobacter shibae DFL-12 | 0.61 | Dshi_1809 | | excinuclease ABC, A subunit (RefSeq) | 0.41 | Dshi_0648 | | recombination protein RecR (RefSeq) | 0.55 | 18 |
| Azospirillum brasilense Sp245 | 0.61 | AZOBR_RS15370 | | excinuclease ABC subunit A | 0.43 | AZOBR_RS03880 | | recombinase RecR | 0.66 | 9 |
| Agrobacterium fabrum C58 | 0.61 | Atu1513 | | ABC excinuclease subunit A | 0.42 | Atu0093 | | Recombination protein | 0.52 | 9 |
| Sinorhizobium meliloti 1021 | 0.60 | SMc01235 | | excinuclease ABC subunit A | 0.40 | SMc02908 | | recombination protein RecR | 0.67 | 9 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.60 | A4249_RS08575 | | excinuclease ABC subunit UvrA | 0.35 | A4249_RS15115 | | recombination mediator RecR | low | > 48 |
| Rhizobium sp. OAE497 | 0.60 | ABIE40_RS09360 | | excinuclease ABC subunit UvrA | 0.39 | ABIE40_RS00300 | | recombination mediator RecR | low | > 107 |
| Magnetospirillum magneticum AMB-1 | 0.60 | AMB_RS12410 | | excinuclease ABC subunit UvrA | 0.38 | AMB_RS20755 | | recombination protein RecR | low | > 64 |
| Bosea sp. OAE506 | 0.60 | ABIE41_RS15100 | | excinuclease ABC subunit UvrA | 0.40 | ABIE41_RS04035 | | recombination mediator RecR | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.59 | Ga0059261_0674 | | excinuclease ABC, A subunit | 0.41 | Ga0059261_0645 | | DNA replication and repair protein RecR | 0.89 | 4 |
| Rhodopseudomonas palustris CGA009 | 0.59 | TX73_014580 | | excinuclease ABC subunit UvrA | 0.44 | TX73_003195 | | recombination mediator RecR | — | — |
| Phaeobacter inhibens DSM 17395 | 0.59 | PGA1_c17370 | | uvrABC system protein A | 0.37 | PGA1_c30290 | | recombination protein RecR | 0.73 | 5 |
| Mycobacterium tuberculosis H37Rv | 0.57 | Rv1638 | | Probable excinuclease ABC (subunit A-DNA-binding ATPase) UvrA | 0.40 | Rv3715c | | Probable recombination protein RecR | low | > 58 |
| Bifidobacterium breve UCC2003 | 0.55 | BBR_RS15510 | | excinuclease ABC subunit UvrA | 0.41 | BBR_RS10990 | | recombination protein RecR | 0.57 | 8 |
| Synechococcus elongatus PCC 7942 | 0.54 | Synpcc7942_0848 | uvrA | excinuclease ABC subunit A | 0.40 | Synpcc7942_1369 | recR | recombination protein RecR | — | — |
| Fusobacterium nucleatum SB010 | 0.53 | HUW76_06660 | | excinuclease ABC subunit UvrA | 0.43 | HUW76_08785 | | recombination protein RecR | low | > 35 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.53 | CA264_18100 | | ABC-ATPase UvrA | 0.41 | CA264_01105 | | recombination protein RecR | low | > 74 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.52 | Echvi_1138 | | excinuclease ABC, A subunit | 0.41 | Echvi_1987 | | recombination protein RecR | 0.88 | 3 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.51 | BT0578 | | excinuclease ABC subunit A (NCBI ptt file) | 0.39 | BT1081 | | recombination protein recR (NCBI ptt file) | low | > 81 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.51 | CA265_RS25080 | | excinuclease ABC subunit A | 0.38 | CA265_RS04980 | | recombination protein RecR | 0.83 | 7 |
| Parabacteroides merdae CL09T00C40 | 0.51 | HMPREF1078_RS00835 | | excinuclease ABC subunit UvrA | 0.37 | HMPREF1078_RS07615 | | recombination mediator RecR | low | > 61 |
| Phocaeicola dorei CL03T12C01 | 0.51 | ABI39_RS15330 | | excinuclease ABC subunit UvrA | 0.38 | ABI39_RS14870 | | recombination protein RecR | low | > 72 |
| Phocaeicola vulgatus CL09T03C04 | 0.50 | HMPREF1058_RS01735 | | excinuclease ABC subunit UvrA | 0.38 | HMPREF1058_RS18560 | | recombination protein RecR | 0.68 | 47 |
| Bacteroides stercoris CC31F | 0.50 | HMPREF1181_RS15185 | | excinuclease ABC subunit UvrA | 0.38 | HMPREF1181_RS16455 | | recombination protein RecR | low | > 56 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.50 | ABZR88_RS18670 | | excinuclease ABC subunit UvrA | 0.42 | ABZR88_RS10695 | | recombination mediator RecR | low | > 71 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.48 | DVU1987 | uvrA | excinuclease ABC, A subunit (TIGR) | 0.34 | DVU3200 | recR | recombination protein RecR (TIGR) | low | > 55 |
| Desulfovibrio vulgaris Miyazaki F | 0.47 | DvMF_3050 | | excinuclease ABC, A subunit (RefSeq) | 0.32 | DvMF_2271 | | recombination protein RecR (RefSeq) | 0.67 | 4 |
Not shown: 3 genomes with orthologs for Dsui_1622 only; 1 genomes with orthologs for Dsui_1811 only