Conservation of cofitness between CSW01_02875 and CSW01_13680 in Vibrio cholerae E7946 ATCC 55056

117 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02875 DNA recombination/repair protein RecA 1.0 CSW01_13680 DNA helicase RecG 0.58 13
Pectobacterium carotovorum WPP14 0.83 HER17_RS05045 recombinase RecA 0.68 HER17_RS21395 ATP-dependent DNA helicase RecG 0.57 36
Rahnella sp. WP5 0.82 EX31_RS07800 recombinase RecA 0.67 EX31_RS15820 ATP-dependent DNA helicase RecG low > 89
Dickeya dianthicola ME23 0.82 DZA65_RS17450 recombinase RecA 0.68 DZA65_RS22160 ATP-dependent DNA helicase RecG — —
Dickeya dadantii 3937 0.82 DDA3937_RS16245 recombinase RecA 0.69 DDA3937_RS00170 ATP-dependent DNA helicase RecG low > 74
Dickeya dianthicola 67-19 0.82 HGI48_RS16355 recombinase RecA 0.68 HGI48_RS21190 ATP-dependent DNA helicase RecG low > 71
Shewanella oneidensis MR-1 0.81 SO3430 recA recA protein (NCBI ptt file) 0.64 SO4364 recG ATP-dependent DNA helicase RecG (NCBI ptt file) low > 76
Erwinia tracheiphila SCR3 0.81 LU632_RS15735 recA recombinase RecA 0.67 LU632_RS22190 recG ATP-dependent DNA helicase RecG — —
Erwinia tracheiphila HP pepo 2.2 0.81 IJEDHG_01625 recA recombinase RecA 0.67 IJEDHG_08345 recG ATP-dependent DNA helicase RecG — —
Enterobacter sp. TBS_079 0.81 MPMX20_03580 Protein RecA 0.68 MPMX20_00084 ATP-dependent DNA helicase RecG 0.44 54
Enterobacter asburiae PDN3 0.81 EX28DRAFT_2785 protein RecA 0.67 EX28DRAFT_3901 ATP-dependent DNA helicase RecG (EC 3.6.1.-) — —
Pantoea agglomerans CFBP13505 P0401 0.81 PagCFBP13516_RS04670 recA recombinase RecA 0.70 PagCFBP13516_RS00485 recG ATP-dependent DNA helicase RecG low > 80
Klebsiella pneumoniae MKP103 0.81 KDGMDA_02850 recombinase RecA 0.69 KDGMDA_08135 ATP-dependent DNA helicase RecG low > 94
Shewanella sp. ANA-3 0.81 Shewana3_1126 recA recombinase A (RefSeq) 0.65 Shewana3_0348 ATP-dependent DNA helicase RecG (RefSeq) low > 73
Klebsiella pneumoniae MRSN742743 0.81 GJGHJB_01083 recA recombinase RecA 0.69 GJGHJB_00114 recG ATP-dependent DNA helicase RecG — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.81 GFF4693 RecA protein 0.69 GFF355 ATP-dependent DNA helicase RecG (EC 3.6.1.-) — —
Klebsiella michiganensis M5al 0.80 BWI76_RS22180 recombinase RecA 0.68 BWI76_RS27440 DNA helicase RecG — —
Pantoea sp. MT58 0.80 IAI47_04300 recombinase RecA 0.70 IAI47_00500 ATP-dependent DNA helicase RecG 0.57 3
Escherichia coli ECRC102 0.80 NIAGMN_18475 recA recombinase RecA 0.69 NIAGMN_13305 recG ATP-dependent DNA helicase RecG — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.80 OHPLBJKB_01035 Protein RecA 0.68 OHPLBJKB_00049 ATP-dependent DNA helicase RecG low > 74
Escherichia coli BL21 0.80 ECD_02549 DNA recombination and repair protein; ssDNA-dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP-dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor 0.68 ECD_03509 ATP-dependent DNA helicase low > 61
Escherichia coli ECRC101 0.80 MCAODC_11230 recA recombinase RecA 0.69 MCAODC_06055 recG ATP-dependent DNA helicase RecG low > 87
Escherichia fergusonii Becca 0.80 EFB2_01225 Protein RecA 0.68 EFB2_00136 ATP-dependent DNA helicase RecG low > 86
Escherichia coli ECOR27 0.80 NOLOHH_12545 recA recombinase RecA 0.68 NOLOHH_07425 recG ATP-dependent DNA helicase RecG low > 75
Escherichia coli ECRC100 0.80 OKFHMN_20705 recA recombinase RecA 0.69 OKFHMN_15545 recG ATP-dependent DNA helicase RecG — —
Escherichia coli ECRC62 0.80 BNILDI_11105 recA recombinase RecA 0.68 BNILDI_04090 recG ATP-dependent DNA helicase RecG low > 75
Escherichia coli ECRC98 0.80 JDDGAC_24370 recA recombinase RecA 0.69 JDDGAC_19170 recG ATP-dependent DNA helicase RecG — —
Escherichia coli BW25113 0.80 b2699 recA recombinase A (NCBI) 0.68 b3652 recG ATP-dependent DNA helicase (NCBI) low > 76
Escherichia coli ECRC99 0.80 KEDOAH_07430 recA recombinase RecA 0.69 KEDOAH_12600 recG ATP-dependent DNA helicase RecG — —
Escherichia coli Nissle 1917 0.80 ECOLIN_RS15060 recombinase RecA 0.68 ECOLIN_RS20800 ATP-dependent DNA helicase RecG — —
Escherichia coli ECOR38 0.80 HEPCGN_19900 recA recombinase RecA 0.68 HEPCGN_14365 recG ATP-dependent DNA helicase RecG low > 88
Shewanella amazonensis SB2B 0.80 Sama_1046 recA recombinase A (RefSeq) 0.65 Sama_3375 ATP-dependent DNA helicase RecG (RefSeq) low > 62
Shewanella loihica PV-4 0.80 Shew_1215 recA recombinase A (RefSeq) 0.65 Shew_3507 ATP-dependent DNA helicase RecG (RefSeq) low > 60
Erwinia amylovora T8 0.80 OLJFJH_09575 recombinase RecA 0.69 OLJFJH_05550 ATP-dependent DNA helicase RecG low > 58
Serratia liquefaciens MT49 0.80 IAI46_03840 recombinase RecA 0.69 IAI46_24905 ATP-dependent DNA helicase RecG low > 87
Alteromonas macleodii MIT1002 0.77 MIT1002_00955 Recombinase A 0.64 MIT1002_00111 ATP-dependent DNA helicase RecG low > 70
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_16805 recombinase RecA 0.55 AO353_09320 ATP-dependent DNA helicase RecG 0.58 2
Pseudomonas sp. RS175 0.73 PFR28_00472 Protein RecA 0.55 PFR28_04435 ATP-dependent DNA helicase RecG low > 88
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_05670 recombinase RecA 0.55 AO356_12380 ATP-dependent DNA helicase RecG 0.59 1
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_2993 RecA protein 0.55 Pf6N2E2_4352 ATP-dependent DNA helicase RecG (EC 3.6.1.-) — —
Pseudomonas sp. S08-1 0.73 OH686_18205 protein RecA 0.56 OH686_13505 ATP-dependent DNA helicase RecG low > 80
Pseudomonas aeruginosa PA14 0.73 IKLFDK_18465 recombinase RecA 0.55 IKLFDK_26730 ATP-dependent DNA helicase RecG 0.72 2
Pseudomonas aeruginosa MRSN321 0.73 PFGADD_01352 recA recombinase RecA 0.55 PFGADD_05596 recG ATP-dependent DNA helicase RecG 0.51 2
Pseudomonas aeruginosa PUPa3 0.73 NPBIFN_01371 recA recombinase RecA 0.55 NPBIFN_05672 recG ATP-dependent DNA helicase RecG 0.57 2
Pseudomonas segetis P6 0.73 ACVTMO_RS16500 recA recombinase RecA 0.57 ACVTMO_RS00200 recG ATP-dependent DNA helicase RecG 0.65 29
Pseudomonas sp. DMC3 0.73 GFF2111 Protein RecA 0.55 GFF427 ATP-dependent DNA helicase RecG low > 89
Pseudomonas sp. SVBP6 0.73 COO64_RS19930 recA recombinase RecA 0.55 COO64_RS01595 recG ATP-dependent DNA helicase RecG 0.36 52
Pseudomonas lactucae CFBP13502 0.73 GEMAOFIL_01333 Protein RecA 0.55 GEMAOFIL_00042 ATP-dependent DNA helicase RecG low > 96
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_3143 RecA protein 0.55 Pf1N1B4_2105 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.44 13
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_4668 RecA protein 0.55 PfGW456L13_772 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.76 1
Pseudomonas fluorescens SBW25 0.72 PFLU_RS05885 recombinase RecA 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG low > 109
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS05885 recombinase RecA 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG low > 109
Pseudomonas simiae WCS417 0.72 PS417_05815 recombinase RecA 0.55 PS417_27870 ATP-dependent DNA helicase RecG 0.46 10
Pseudomonas orientalis W4I3 0.72 QF045_RS08730 recombinase RecA 0.55 QF045_RS02225 ATP-dependent DNA helicase RecG low > 93
Kangiella aquimarina DSM 16071 0.72 B158DRAFT_1531 protein RecA 0.49 B158DRAFT_0566 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.49 37
Pseudomonas stutzeri RCH2 0.72 Psest_2872 protein RecA 0.57 Psest_4192 ATP-dependent DNA helicase RecG — —
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_1378 RecA protein 0.55 Psyr_0201 ATP-dependent DNA helicase RecG 0.35 8
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_1378 RecA protein 0.55 Psyr_0201 ATP-dependent DNA helicase RecG 0.44 7
Pseudomonas putida KT2440 0.72 PP_1629 Protein RecA 0.56 PP_5310 junction-specific ATP-dependent DNA helicase 0.58 2
Pseudomonas protegens RBAN4 0.72 FABNJH_06445 recA recombinase RecA 0.55 FABNJH_30625 recG ATP-dependent DNA helicase RecG — —
Pseudomonas sp. BP01 0.72 JOY50_RS23780 recA recombinase RecA 0.56 JOY50_RS08945 recG ATP-dependent DNA helicase RecG low > 84
Acinetobacter radioresistens SK82 0.71 MPMX26_01308 Protein RecA 0.52 MPMX26_02732 ATP-dependent DNA helicase RecG low > 36
Rhodanobacter denitrificans FW104-10B01 0.71 LRK54_RS14980 recombinase RecA 0.50 LRK54_RS11805 ATP-dependent DNA helicase RecG low > 59
Marinobacter adhaerens HP15 0.71 HP15_1048 recombinase A 0.55 HP15_309 DNA helicase, ATP-dependent, RecG 0.22 65
Rhodanobacter denitrificans MT42 0.71 LRK55_RS14695 recombinase RecA 0.51 LRK55_RS11530 ATP-dependent DNA helicase RecG low > 63
Rhodanobacter sp. FW510-T8 0.71 OKGIIK_03740 recA recombinase RecA 0.50 OKGIIK_12090 recG ATP-dependent DNA helicase RecG — —
Rhodanobacter sp000427505 FW510-R12 0.71 LRK53_RS13640 recombinase RecA 0.52 LRK53_RS16735 ATP-dependent DNA helicase RecG — —
Acinetobacter baumannii LAC-4 0.71 RR41_RS08110 recombinase RecA 0.52 RR41_RS02075 ATP-dependent DNA helicase RecG — —
Lysobacter sp. OAE881 0.69 ABIE51_RS07800 recombinase RecA 0.53 ABIE51_RS17230 ATP-dependent DNA helicase RecG 0.62 17
Dyella japonica UNC79MFTsu3.2 0.68 ABZR86_RS00660 recombinase RecA 0.51 ABZR86_RS11840 ATP-dependent DNA helicase RecG 0.70 9
Methylophilus sp. DMC18 0.67 GFF841 Protein RecA 0.45 GFF2125 ATP-dependent DNA helicase RecG low > 43
Castellaniella sp019104865 MT123 0.67 ABCV34_RS04460 recombinase RecA 0.41 ABCV34_RS03570 ATP-dependent DNA helicase RecG 0.54 43
Rhizobium sp. OAE497 0.67 ABIE40_RS10320 recombinase RecA 0.34 ABIE40_RS09300 ATP-dependent DNA helicase RecG low > 107
Xanthomonas campestris pv. campestris strain 8004 0.67 Xcc-8004.3111.1 RecA protein 0.51 Xcc-8004.1204.1 ATP-dependent DNA helicase RecG (EC 3.6.1.-) — —
Sphingobium sp. HT1-2 0.67 GFF3120 RecA protein 0.33 GFF3604 ATP-dependent DNA helicase RecG (EC 3.6.4.12) 0.77 7
Agrobacterium fabrum C58 0.66 Atu1874 RecA protein 0.33 Atu1780 ATP-dependent DNA helicase 0.61 4
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS16360 recombinase RecA 0.44 BPHYT_RS03400 ATP-dependent DNA helicase RecG — —
Rhodospirillum rubrum S1H 0.66 Rru_A2819 RecA DNA recombination protein (NCBI) 0.29 Rru_A1728 ATP-dependent DNA helicase RecG (NCBI) — —
Sphingomonas koreensis DSMZ 15582 0.66 Ga0059261_0204 protein RecA 0.31 Ga0059261_0958 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.68 3
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_04208 RecA protein 0.44 H281DRAFT_04672 ATP-dependent DNA helicase RecG low > 103
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS02335 recombinase RecA 0.44 QEN71_RS26630 ATP-dependent DNA helicase RecG — —
Paraburkholderia graminis OAS925 0.66 ABIE53_003448 recombination protein RecA 0.44 ABIE53_000833 ATP-dependent DNA helicase RecG low > 113
Dechlorosoma suillum PS 0.66 Dsui_0707 protein RecA 0.42 Dsui_0311 ATP-dependent DNA helicase RecG 0.81 7
Azospirillum brasilense Sp245 0.66 AZOBR_RS11095 recombinase RecA 0.33 AZOBR_RS09850 ATP-dependent DNA helicase RecG 0.36 69
Sinorhizobium meliloti 1021 0.66 SMc00760 recombinase A 0.35 SMc00228 ATP-dependent DNA helicase RecG 0.55 5
Azospirillum sp. SherDot2 0.66 MPMX19_00869 Protein RecA 0.34 MPMX19_00951 ATP-dependent DNA helicase RecG — —
Rhodopseudomonas palustris CGA009 0.66 TX73_019940 recombinase RecA 0.29 TX73_013795 ATP-dependent DNA helicase RecG — —
Xanthobacter sp. DMC5 0.65 GFF1169 Protein RecA 0.29 GFF630 ATP-dependent DNA helicase RecG — —
Magnetospirillum magneticum AMB-1 0.65 AMB_RS03205 DNA recombination/repair protein RecA 0.34 AMB_RS12400 ATP-dependent DNA helicase RecG — —
Phaeobacter inhibens DSM 17395 0.65 PGA1_c15260 protein recA (recombinase A) 0.32 PGA1_c14380 ATP-dependent DNA helicase RecG 0.48 11
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS03270 protein RecA 0.44 HSERO_RS06165 ATP-dependent DNA helicase RecG 0.59 8
Brevundimonas sp. GW460-12-10-14-LB2 0.64 A4249_RS12615 recombinase RecA 0.30 A4249_RS04765 ATP-dependent DNA helicase RecG low > 48
Variovorax sp. SCN45 0.64 GFF5390 RecA protein 0.38 GFF5538 ATP-dependent DNA helicase RecG (EC 3.6.4.12) 0.62 114
Variovorax sp. OAS795 0.64 ABID97_RS02275 recombinase RecA 0.41 ABID97_RS01575 ATP-dependent DNA helicase RecG 0.48 29
Ralstonia solanacearum PSI07 0.64 RPSI07_RS21260 recombinase RecA 0.45 RPSI07_RS11625 DNA helicase RecG 0.34 77
Ralstonia sp. UNC404CL21Col 0.63 ABZR87_RS07965 recombinase RecA 0.45 ABZR87_RS01270 ATP-dependent DNA helicase RecG 0.74 1
Acidovorax sp. GW101-3H11 0.63 Ac3H11_1255 RecA protein 0.44 Ac3H11_781 ATP-dependent DNA helicase RecG (EC 3.6.1.-) — —
Ralstonia solanacearum UW163 0.63 UW163_RS01625 recombinase RecA 0.45 UW163_RS07950 DNA helicase RecG — —
Bosea sp. OAE506 0.63 ABIE41_RS13335 recombinase RecA 0.31 ABIE41_RS15815 ATP-dependent DNA helicase RecG 0.60 21
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS12010 recombinase RecA 0.45 RALBFv3_RS05675 DNA helicase RecG 0.59 17
Ralstonia solanacearum GMI1000 0.63 RS_RS02760 DNA recombination/repair protein RecA 0.45 RS_RS13565 DNA helicase RecG — —
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS03080 recombinase RecA 0.45 RR42_RS17390 ATP-dependent DNA helicase RecG 0.60 1
Hydrogenophaga sp. GW460-11-11-14-LB1 0.62 GFF2500 RecA protein 0.40 GFF2802 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.75 16
Pontibacter actiniarum KMM 6156, DSM 19842 0.60 CA264_19695 DNA recombination/repair protein RecA 0.31 CA264_15020 DNA helicase RecG — —
Caulobacter crescentus NA1000 0.60 CCNA_01141 RecA protein 0.33 CCNA_01504 ATP-dependent DNA helicase recG low > 66
Dinoroseobacter shibae DFL-12 0.60 Dshi_1643 recA protein (RefSeq) 0.32 Dshi_1510 DEAD/DEAH box helicase domain protein (RefSeq) 0.39 19
Caulobacter crescentus NA1000 Δfur 0.60 CCNA_01141 RecA protein 0.33 CCNA_01504 ATP-dependent DNA helicase recG — —
Cellulophaga baltica 18 0.59 M666_RS05260 recombinase RecA 0.32 M666_RS15340 ATP-dependent DNA helicase RecG low > 67
Phocaeicola dorei CL03T12C01 0.57 ABI39_RS11930 recombinase RecA 0.33 ABI39_RS02470 ATP-dependent DNA helicase RecG low > 72
Mucilaginibacter yixingensis YX-36 DSM 26809 0.57 ABZR88_RS16740 recombinase RecA 0.29 ABZR88_RS17240 ATP-dependent DNA helicase RecG low > 71
Phocaeicola vulgatus CL09T03C04 0.56 HMPREF1058_RS15965 recombinase RecA 0.34 HMPREF1058_RS08295 ATP-dependent DNA helicase RecG low > 67
Pedobacter sp. GW460-11-11-14-LB5 0.56 CA265_RS00600 recombinase RecA 0.30 CA265_RS22835 ATP-dependent DNA helicase RecG 0.60 12
Echinicola vietnamensis KMM 6221, DSM 17526 0.56 Echvi_0044 protein RecA 0.32 Echvi_1162 ATP-dependent DNA helicase RecG 0.52 10
Synechococcus elongatus PCC 7942 0.56 Synpcc7942_0348 recA recombinase A 0.35 Synpcc7942_1079 recG ATP-dependent DNA helicase RecG — —
Parabacteroides merdae CL09T00C40 0.55 HMPREF1078_RS00095 recombinase RecA 0.33 HMPREF1078_RS12765 ATP-dependent DNA helicase RecG — —
Bacteroides stercoris CC31F 0.55 HMPREF1181_RS11910 recombinase RecA 0.33 HMPREF1181_RS06615 ATP-dependent DNA helicase RecG low > 56
Bacteroides thetaiotaomicron VPI-5482 0.55 BT4610 RecA (NCBI ptt file) 0.33 BT3924 ATP-dependent DNA helicase recG (NCBI ptt file) — —
Fusobacterium nucleatum SB010 0.52 HUW76_07355 recombinase RecA 0.32 HUW76_01465 ATP-dependent DNA helicase RecG 0.98 4

Not shown: 5 genomes with orthologs for CSW01_02875 only; 0 genomes with orthologs for CSW01_13680 only