Conservation of cofitness between CSW01_01045 and CSW01_12105 in Vibrio cholerae E7946 ATCC 55056

113 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01045 DNA helicase RecQ 1.0 CSW01_12105 carbamoyl-phosphate synthase small subunit 0.73 6
Klebsiella pneumoniae MKP103 0.67 KDGMDA_09735 ATP-dependent DNA helicase RecQ 0.84 KDGMDA_12705 carbamoyl phosphate synthase small subunit low > 95
Escherichia coli ECRC99 0.67 KEDOAH_13790 recQ ATP-dependent DNA helicase RecQ 0.84 KEDOAH_17210 carA carbamoyl phosphate synthase small subunit
Escherichia coli ECRC100 0.67 OKFHMN_14360 recQ ATP-dependent DNA helicase RecQ 0.84 OKFHMN_10945 carA carbamoyl phosphate synthase small subunit low > 79
Escherichia coli ECOR27 0.67 NOLOHH_06490 recQ ATP-dependent DNA helicase RecQ 0.84 NOLOHH_03275 carA carbamoyl phosphate synthase small subunit low > 76
Escherichia coli ECOR38 0.67 HEPCGN_13060 recQ ATP-dependent DNA helicase RecQ 0.84 HEPCGN_08930 carA carbamoyl phosphate synthase small subunit low > 88
Escherichia coli ECRC102 0.67 NIAGMN_12115 recQ ATP-dependent DNA helicase RecQ 0.84 NIAGMN_08795 carA carbamoyl phosphate synthase small subunit low > 80
Escherichia coli ECRC101 0.67 MCAODC_04865 recQ ATP-dependent DNA helicase RecQ 0.84 MCAODC_01460 carA carbamoyl phosphate synthase small subunit 0.30 84
Escherichia coli ECRC62 0.67 BNILDI_05040 recQ ATP-dependent DNA helicase RecQ 0.84 BNILDI_08325 carA carbamoyl phosphate synthase small subunit low > 75
Escherichia coli ECRC98 0.67 JDDGAC_17985 recQ ATP-dependent DNA helicase RecQ 0.84 JDDGAC_14540 carA carbamoyl phosphate synthase small subunit low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_04229 ATP-dependent DNA helicase RecQ 0.84 OHPLBJKB_03625 Carbamoyl-phosphate synthase small chain low > 74
Escherichia fergusonii Becca 0.67 EFB2_04815 ATP-dependent DNA helicase RecQ 0.84 EFB2_04013 Carbamoyl-phosphate synthase small chain low > 86
Escherichia coli Nissle 1917 0.67 ECOLIN_RS21935 ATP-dependent DNA helicase RecQ 0.84 ECOLIN_RS00175 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 55
Escherichia coli BW25113 0.67 b3822 recQ ATP-dependent DNA helicase (NCBI) 0.84 b0032 carA carbamoyl-phosphate synthase small subunit (NCBI) low > 76
Pantoea sp. MT58 0.67 IAI47_18360 ATP-dependent DNA helicase RecQ 0.79 IAI47_16120 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 76
Escherichia coli BL21 0.66 ECD_03701 ATP-dependent DNA helicase 0.84 ECD_00036 carbamoyl phosphate synthetase small subunit, glutamine amidotransferase low > 61
Klebsiella michiganensis M5al 0.66 BWI76_RS01245 DNA helicase RecQ 0.84 BWI76_RS04465 carbamoyl-phosphate synthase small subunit low > 92
Serratia liquefaciens MT49 0.66 IAI46_00770 ATP-dependent DNA helicase RecQ 0.80 IAI46_03190 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 87
Erwinia tracheiphila SCR3 0.66 LU632_RS24095 recQ ATP-dependent DNA helicase RecQ 0.76 LU632_RS02755 carA glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 73
Dickeya dianthicola 67-19 0.66 HGI48_RS20005 ATP-dependent DNA helicase RecQ 0.81 HGI48_RS18245 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 71
Pantoea agglomerans CFBP13505 P0401 0.66 PagCFBP13505_RS15340 ATP-dependent DNA helicase RecQ 0.80 PagCFBP13505_RS12875 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 74
Erwinia amylovora T8 0.66 OLJFJH_06445 ATP-dependent DNA helicase RecQ 0.79 OLJFJH_01400 carbamoyl phosphate synthase small subunit low > 58
Dickeya dianthicola ME23 0.66 DZA65_RS21045 ATP-dependent DNA helicase RecQ 0.81 DZA65_RS19385 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 75
Dickeya dadantii 3937 0.66 DDA3937_RS19850 ATP-dependent DNA helicase RecQ 0.81 DDA3937_RS18310 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 74
Erwinia tracheiphila HP pepo 2.2 0.66 IJEDHG_08740 recQ ATP-dependent DNA helicase RecQ 0.76 IJEDHG_06140 carA carbamoyl phosphate synthase small subunit low > 61
Enterobacter asburiae PDN3 0.66 EX28DRAFT_4487 ATP-dependent DNA helicase RecQ 0.85 EX28DRAFT_3637 carbamoyl-phosphate synthase, small subunit
Enterobacter sp. TBS_079 0.66 MPMX20_04458 ATP-dependent DNA helicase RecQ 0.82 MPMX20_00739 Carbamoyl-phosphate synthase small chain low > 85
Rahnella sp. WP5 0.65 EX31_RS15210 ATP-dependent DNA helicase RecQ 0.83 EX31_RS03835 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 89
Pectobacterium carotovorum WPP14 0.65 HER17_RS01395 ATP-dependent DNA helicase RecQ 0.82 HER17_RS02895 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF248 ATP-dependent DNA helicase RecQ 0.83 GFF214 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) low > 78
Shewanella sp. ANA-3 0.59 Shewana3_3763 ATP-dependent DNA helicase RecQ (RefSeq) 0.80 Shewana3_0967 carbamoyl phosphate synthase small subunit (RefSeq) low > 73
Shewanella oneidensis MR-1 0.58 SO4241 recQ ATP-dependent DNA helicase RecQ (NCBI ptt file) 0.80 SO1141 carA carbamoyl-phosphate synthase, small subunit (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.58 Shew_3474 ATP-dependent DNA helicase RecQ (RefSeq) 0.80 Shew_2839 carbamoyl phosphate synthase small subunit (RefSeq) low > 60
Shewanella amazonensis SB2B 0.57 Sama_0333 ATP-dependent DNA helicase RecQ (RefSeq) 0.80 Sama_2504 carbamoyl phosphate synthase small subunit (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.54 MIT1002_00148 ATP-dependent DNA helicase RecQ 0.77 MIT1002_01466 Carbamoyl-phosphate synthase small chain low > 70
Xanthobacter sp. DMC5 0.47 GFF753 ATP-dependent DNA helicase RecQ 0.51 GFF3240 Carbamoyl-phosphate synthase small chain
Pseudomonas sp. SVBP6 0.46 COO64_RS21845 recQ DNA helicase RecQ 0.75 COO64_RS15245 carA glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 93
Pseudomonas aeruginosa PUPa3 0.45 DQ20_RS40870 recQ;go_function=DNA DNA helicase RecQ 0.74 DQ20_RS52490 carA;go_component=carbamoyl-phosphate glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 101
Pseudomonas aeruginosa MRSN321 0.45 DY961_RS00140 recQ;go_function=DNA DNA helicase RecQ 0.74 DY961_RS09545 carA;go_component=carbamoyl-phosphate glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Pseudomonas aeruginosa PA14 0.45 IKLFDK_17145 DNA helicase RecQ 0.75 IKLFDK_29805 carbamoyl phosphate synthase small subunit
Marinobacter adhaerens HP15 0.45 HP15_1718 ATP-dependent DNA helicase RecQ 0.71 HP15_3078 carbamoyl-phosphate synthase small chain low > 73
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_4423 ATP-dependent DNA helicase RecQ 0.74 PfGW456L13_5100 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Pseudomonas sp. RS175 0.45 PFR28_00788 ATP-dependent DNA helicase RecQ 0.74 PFR28_00076 Carbamoyl-phosphate synthase small chain
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS19925 DNA helicase RecQ 0.66 ABZR86_RS05605 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_04050 ATP-dependent DNA helicase RecQ 0.74 AO356_07485 carbamoyl phosphate synthase small subunit
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS13000 DNA helicase RecQ 0.66 LRK54_RS17995 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Pseudomonas segetis P6 0.45 MPMX49_02936 ATP-dependent DNA helicase RecQ 0.73 MPMX49_01186 Carbamoyl-phosphate synthase small chain
Pseudomonas sp. S08-1 0.45 OH686_20670 ATP-dependent DNA helicase RecQ 0.73 OH686_17075 Carbamoyl-phosphate synthase small chain
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_2645 ATP-dependent DNA helicase RecQ 0.74 Pf6N2E2_3365 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Rhodanobacter denitrificans MT42 0.45 LRK55_RS12700 DNA helicase RecQ 0.66 LRK55_RS17850 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_3533 ATP-dependent DNA helicase RecQ 0.74 Pf1N1B4_1173 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Pontibacter actiniarum KMM 6156, DSM 19842 0.45 CA264_07560 DNA helicase RecQ 0.40 CA264_19490 carbamoyl phosphate synthase small subunit low > 74
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ 0.73 Psyr_4192 carbamoyl-phosphate synthase small subunit
Pseudomonas sp. BP01 0.44 JOY50_RS01155 recQ DNA helicase RecQ 0.73 JOY50_RS26760 carA glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ 0.73 Psyr_4192 carbamoyl-phosphate synthase small subunit
Pseudomonas sp. DMC3 0.44 GFF2380 ATP-dependent DNA helicase RecQ 0.74 GFF4976 Carbamoyl-phosphate synthase small chain
Pseudomonas putida KT2440 0.44 PP_4516 ATP-dependent DNA 3 0.74 PP_4724 Carbamoyl-phosphate synthase small chain low > 96
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_18430 ATP-dependent DNA helicase RecQ 0.74 AO353_05635 carbamoyl phosphate synthase small subunit
Pseudomonas orientalis W4I3 0.44 QF045_RS22070 DNA helicase RecQ 0.74 QF045_RS26300 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Pseudomonas fluorescens SBW25 0.44 PFLU_RS21920 DNA helicase RecQ 0.73 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Rhodanobacter sp000427505 FW510-R12 0.44 LRK53_RS15600 DNA helicase RecQ 0.64 LRK53_RS11365 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Variovorax sp. OAS795 0.44 ABID97_RS03395 DNA helicase RecQ 0.65 ABID97_RS17090 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Pseudomonas simiae WCS417 0.44 PS417_19950 ATP-dependent DNA helicase RecQ 0.74 PS417_24045 carbamoyl phosphate synthase small subunit
Pseudomonas lactucae CFBP13502 0.44 GEMAOFIL_04187 ATP-dependent DNA helicase RecQ 0.73 GEMAOFIL_04959 Carbamoyl-phosphate synthase small chain low > 96
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS21920 DNA helicase RecQ 0.73 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Pseudomonas stutzeri RCH2 0.44 Psest_1869 ATP-dependent DNA helicase RecQ 0.72 Psest_0967 carbamoyl-phosphate synthase, small subunit
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS02465 ATP-dependent DNA helicase RecQ 0.67 HSERO_RS06920 carbamoyl phosphate synthase small subunit
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_02375 recQ DNA helicase RecQ 0.65 OKGIIK_07300 carbamoyl phosphate synthase small subunit low > 53
Rhizobium sp. OAE497 0.44 ABIE40_RS12745 DNA helicase RecQ 0.47 ABIE40_RS12765 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Agrobacterium fabrum C58 0.44 Atu0061 ATP-dependent DNA helicase 0.47 Atu2170 carbamoylphosphate synthase small chain
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.1476.1 ATP-dependent DNA helicase RecQ 0.65 Xcc-8004.2914.1 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Methylophilus sp. DMC18 0.43 GFF2139 ATP-dependent DNA helicase RecQ 0.72 GFF311 Carbamoyl-phosphate synthase small chain
Magnetospirillum magneticum AMB-1 0.43 AMB_RS21505 DNA helicase RecQ 0.52 AMB_RS03600 carbamoyl-phosphate synthase small subunit
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS28295 DNA helicase RecQ 0.68 QEN71_RS04775 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Dinoroseobacter shibae DFL-12 0.43 Dshi_3334 ATP-dependent DNA helicase RecQ (RefSeq) 0.49 Dshi_2387 carbamoyl-phosphate synthase, small subunit (RefSeq)
Paraburkholderia graminis OAS925 0.43 ABIE53_003792 ATP-dependent DNA helicase RecQ 0.66 ABIE53_003005 carbamoyl-phosphate synthase small subunit
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS18145 ATP-dependent DNA helicase RecQ 0.66 BPHYT_RS14195 carbamoyl phosphate synthase small subunit low > 109
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS02880 DNA helicase RecQ 0.68 ABZR87_RS14150 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Phaeobacter inhibens DSM 17395 0.42 PGA1_c31900 ATP-dependent DNA helicase RecQ 0.49 PGA1_c06670 carbamoyl-phosphate synthase small chain low > 62
Mucilaginibacter yixingensis YX-36 DSM 26809 0.42 ABZR88_RS20865 DNA helicase RecQ 0.39 ABZR88_RS17830 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Echinicola vietnamensis KMM 6221, DSM 17526 0.42 Echvi_0784 ATP-dependent DNA helicase RecQ 0.40 Echvi_0226 carbamoyl-phosphate synthase, small subunit
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_06595 ATP-dependent DNA helicase RecQ 0.66 H281DRAFT_04402 carbamoyl-phosphate synthase small subunit
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS19310 ATP-dependent DNA helicase RecQ 0.70 RR42_RS13520 carbamoyl phosphate synthase small subunit
Ralstonia solanacearum GMI1000 0.42 RS_RS15155 DNA helicase RecQ 0.67 RS_RS07620 carbamoyl-phosphate synthase small subunit
Ralstonia solanacearum PSI07 0.42 RPSI07_RS10025 DNA helicase RecQ 0.68 RPSI07_RS15245 carbamoyl-phosphate synthase small subunit
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF1958 ATP-dependent DNA helicase RecQ 0.66 GFF4899 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Ralstonia solanacearum UW163 0.42 UW163_RS06400 DNA helicase RecQ 0.67 UW163_RS15510 carbamoyl-phosphate synthase small subunit
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS07220 DNA helicase RecQ 0.67 RALBFv3_RS02200 carbamoyl-phosphate synthase small subunit
Dechlorosoma suillum PS 0.42 Dsui_3092 ATP-dependent DNA helicase RecQ 0.68 Dsui_3065 carbamoyl-phosphate synthase, small subunit
Azospirillum brasilense Sp245 0.42 AZOBR_RS02840 ATP-dependent DNA helicase RecQ 0.53 AZOBR_RS10920 carbamoyl phosphate synthase small subunit
Lysobacter sp. OAE881 0.42 ABIE51_RS05145 DNA helicase RecQ 0.66 ABIE51_RS11625 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 62
Sinorhizobium meliloti 1021 0.42 SMc01566 ATP-dependent DNA helicase 0.48 SMc01569 carbamoyl phosphate synthase small subunit low > 103
Variovorax sp. SCN45 0.42 GFF6415 ATP-dependent DNA helicase RecQ 0.64 GFF377 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Acidovorax sp. GW101-3H11 0.41 Ac3H11_3308 ATP-dependent DNA helicase RecQ 0.65 Ac3H11_435 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Rhodopseudomonas palustris CGA009 0.41 TX73_025080 DNA helicase RecQ 0.51 TX73_006555 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Phocaeicola vulgatus CL09T03C04 0.41 HMPREF1058_RS14585 DNA helicase RecQ 0.33 HMPREF1058_RS06875 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 67
Bosea sp. OAE506 0.41 ABIE41_RS04160 DNA helicase RecQ 0.48 ABIE41_RS11975 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Azospirillum sp. SherDot2 0.41 MPMX19_00123 ATP-dependent DNA helicase RecQ 0.53 MPMX19_00757 Carbamoyl-phosphate synthase small chain
Phocaeicola dorei CL03T12C01 0.41 ABI39_RS10235 DNA helicase RecQ 0.33 ABI39_RS20670 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 72
Rhodospirillum rubrum S1H 0.40 Rru_A0089 ATP-dependent DNA helicase RecQ (NCBI) 0.50 Rru_A2885 Carbamoyl-phosphate synthase, small subunit (NCBI) low > 58
Parabacteroides merdae CL09T00C40 0.40 HMPREF1078_RS01195 DNA helicase RecQ 0.33 HMPREF1078_RS01295 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 61
Castellaniella sp019104865 MT123 0.40 ABCV34_RS07985 DNA helicase RecQ 0.64 ABCV34_RS15505 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Bacteroides stercoris CC31F 0.40 HMPREF1181_RS14110 DNA helicase RecQ 0.32 HMPREF1181_RS16070 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 56
Cellulophaga baltica 18 0.39 M666_RS16920 DNA helicase RecQ 0.40 M666_RS00880 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 67
Bacteroides thetaiotaomicron VPI-5482 0.39 BT1848 ATP-dependent DNA helicase recQ (NCBI ptt file) 0.32 BT0556 carbamoyl phosphate synthetase III (glutamine-hydrolyzing) (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.38 BACOVA_04594 ATP-dependent DNA helicase RecQ 0.33 BACOVA_03753 carbamoyl-phosphate synthase, small subunit low > 96
Sphingobium sp. HT1-2 0.38 GFF798 ATP-dependent DNA helicase RecQ 0.49 GFF2089 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Brevundimonas sp. GW460-12-10-14-LB2 0.37 A4249_RS14575 DNA helicase RecQ 0.49 A4249_RS16140 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Sphingomonas koreensis DSMZ 15582 0.37 Ga0059261_2261 ATP-dependent DNA helicase RecQ 0.48 Ga0059261_4243 carbamoyl-phosphate synthase, small subunit
Pedobacter sp. GW460-11-11-14-LB5 0.36 CA265_RS08905 DNA helicase RecQ 0.40 CA265_RS15240 carbamoyl phosphate synthase small subunit
Caulobacter crescentus NA1000 0.35 CCNA_03578 ATP-dependent DNA helicase recQ 0.47 CCNA_02925 carbamoyl-phosphate synthase small chain
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_03578 ATP-dependent DNA helicase recQ 0.47 CCNA_02925 carbamoyl-phosphate synthase small chain low > 67
Fusobacterium nucleatum SB010 0.35 HUW76_07235 DNA helicase RecQ 0.42 HUW76_08755 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 35
Bifidobacterium breve UCC2003 0.32 BBR_RS13150 DNA helicase RecQ 0.40 BBR_RS13630 carbamoyl-phosphate synthase small subunit low > 34

Not shown: 0 genomes with orthologs for CSW01_01045 only; 10 genomes with orthologs for CSW01_12105 only