Conservation of cofitness between CSW01_01045 and CSW01_12100 in Vibrio cholerae E7946 ATCC 55056

113 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01045 DNA helicase RecQ 1.0 CSW01_12100 carbamoyl-phosphate synthase large chain 0.74 5
Klebsiella pneumoniae MKP103 0.67 KDGMDA_09735 ATP-dependent DNA helicase RecQ 0.87 KDGMDA_12710 carbamoyl-phosphate synthase large subunit low > 95
Escherichia coli ECRC100 0.67 OKFHMN_14360 recQ ATP-dependent DNA helicase RecQ 0.87 OKFHMN_10940 carB carbamoyl-phosphate synthase large subunit low > 79
Escherichia coli ECOR38 0.67 HEPCGN_13060 recQ ATP-dependent DNA helicase RecQ 0.87 HEPCGN_08925 carB carbamoyl-phosphate synthase large subunit low > 88
Escherichia coli ECOR27 0.67 NOLOHH_06490 recQ ATP-dependent DNA helicase RecQ 0.87 NOLOHH_03270 carB carbamoyl-phosphate synthase large subunit low > 76
Escherichia coli ECRC99 0.67 KEDOAH_13790 recQ ATP-dependent DNA helicase RecQ 0.87 KEDOAH_17215 carB carbamoyl-phosphate synthase large subunit
Escherichia coli ECRC101 0.67 MCAODC_04865 recQ ATP-dependent DNA helicase RecQ 0.87 MCAODC_01455 carB carbamoyl-phosphate synthase large subunit low > 87
Escherichia coli ECRC102 0.67 NIAGMN_12115 recQ ATP-dependent DNA helicase RecQ 0.87 NIAGMN_08790 carB carbamoyl-phosphate synthase large subunit low > 80
Escherichia coli ECRC98 0.67 JDDGAC_17985 recQ ATP-dependent DNA helicase RecQ 0.87 JDDGAC_14535 carB carbamoyl-phosphate synthase large subunit low > 87
Escherichia coli ECRC62 0.67 BNILDI_05040 recQ ATP-dependent DNA helicase RecQ 0.87 BNILDI_08330 carB carbamoyl-phosphate synthase large subunit low > 75
Escherichia coli Nissle 1917 0.67 ECOLIN_RS21935 ATP-dependent DNA helicase RecQ 0.87 ECOLIN_RS00180 carbamoyl-phosphate synthase large subunit low > 55
Escherichia fergusonii Becca 0.67 EFB2_04815 ATP-dependent DNA helicase RecQ 0.87 EFB2_04012 Carbamoyl-phosphate synthase large chain low > 86
Pantoea sp. MT58 0.67 IAI47_18360 ATP-dependent DNA helicase RecQ 0.86 IAI47_16115 carbamoyl-phosphate synthase large subunit low > 76
Escherichia coli BW25113 0.67 b3822 recQ ATP-dependent DNA helicase (NCBI) 0.87 b0033 carB carbamoyl-phosphate synthase large subunit (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_04229 ATP-dependent DNA helicase RecQ 0.87 OHPLBJKB_03624 Carbamoyl-phosphate synthase large chain low > 74
Escherichia coli BL21 0.66 ECD_03701 ATP-dependent DNA helicase 0.87 ECD_00037 carbamoyl-phosphate synthase large subunit low > 61
Klebsiella michiganensis M5al 0.66 BWI76_RS01245 DNA helicase RecQ 0.87 BWI76_RS04470 carbamoyl phosphate synthase large subunit low > 92
Dickeya dianthicola 67-19 0.66 HGI48_RS20005 ATP-dependent DNA helicase RecQ 0.86 HGI48_RS18240 carbamoyl-phosphate synthase large subunit low > 71
Serratia liquefaciens MT49 0.66 IAI46_00770 ATP-dependent DNA helicase RecQ 0.85 IAI46_03195 carbamoyl-phosphate synthase large subunit low > 87
Erwinia tracheiphila SCR3 0.66 LU632_RS24095 recQ ATP-dependent DNA helicase RecQ 0.85 LU632_RS02750 carB carbamoyl-phosphate synthase large subunit low > 73
Pantoea agglomerans CFBP13505 P0401 0.66 PagCFBP13505_RS15340 ATP-dependent DNA helicase RecQ 0.85 PagCFBP13505_RS12880 carbamoyl-phosphate synthase large subunit low > 74
Erwinia amylovora T8 0.66 OLJFJH_06445 ATP-dependent DNA helicase RecQ 0.84 OLJFJH_01395 carbamoyl-phosphate synthase large subunit low > 58
Dickeya dianthicola ME23 0.66 DZA65_RS21045 ATP-dependent DNA helicase RecQ 0.86 DZA65_RS19380 carbamoyl-phosphate synthase large subunit low > 75
Dickeya dadantii 3937 0.66 DDA3937_RS19850 ATP-dependent DNA helicase RecQ 0.86 DDA3937_RS18305 carbamoyl-phosphate synthase large subunit low > 74
Erwinia tracheiphila HP pepo 2.2 0.66 IJEDHG_08740 recQ ATP-dependent DNA helicase RecQ 0.85 IJEDHG_06145 carB carbamoyl-phosphate synthase large subunit low > 61
Enterobacter asburiae PDN3 0.66 EX28DRAFT_4487 ATP-dependent DNA helicase RecQ 0.87 EX28DRAFT_3638 carbamoyl-phosphate synthase, large subunit
Enterobacter sp. TBS_079 0.66 MPMX20_04458 ATP-dependent DNA helicase RecQ 0.87 MPMX20_00740 Carbamoyl-phosphate synthase large chain low > 85
Rahnella sp. WP5 0.65 EX31_RS15210 ATP-dependent DNA helicase RecQ 0.86 EX31_RS03830 carbamoyl-phosphate synthase large subunit low > 89
Pectobacterium carotovorum WPP14 0.65 HER17_RS01395 ATP-dependent DNA helicase RecQ 0.87 HER17_RS02900 carbamoyl-phosphate synthase large subunit low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF248 ATP-dependent DNA helicase RecQ 0.87 GFF213 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) low > 78
Shewanella sp. ANA-3 0.59 Shewana3_3763 ATP-dependent DNA helicase RecQ (RefSeq) 0.86 Shewana3_0968 carB carbamoyl phosphate synthase large subunit (RefSeq) low > 73
Shewanella oneidensis MR-1 0.58 SO4241 recQ ATP-dependent DNA helicase RecQ (NCBI ptt file) 0.86 SO1142 carB carbamoyl-phosphate synthase, large subunit (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.58 Shew_3474 ATP-dependent DNA helicase RecQ (RefSeq) 0.87 Shew_2838 carB carbamoyl phosphate synthase large subunit (RefSeq) low > 60
Shewanella amazonensis SB2B 0.57 Sama_0333 ATP-dependent DNA helicase RecQ (RefSeq) 0.87 Sama_2503 carB carbamoyl phosphate synthase large subunit (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.54 MIT1002_00148 ATP-dependent DNA helicase RecQ 0.81 MIT1002_01467 Carbamoyl-phosphate synthase large chain low > 70
Xanthobacter sp. DMC5 0.47 GFF753 ATP-dependent DNA helicase RecQ 0.60 GFF4681 Carbamoyl-phosphate synthase large chain
Pseudomonas sp. SVBP6 0.46 COO64_RS21845 recQ DNA helicase RecQ 0.75 COO64_RS15240 carB carbamoyl-phosphate synthase large subunit low > 93
Pseudomonas aeruginosa PUPa3 0.45 DQ20_RS40870 recQ;go_function=DNA DNA helicase RecQ 0.76 DQ20_RS52500 carB;go_function=ATP carbamoyl-phosphate synthase large subunit low > 101
Pseudomonas aeruginosa PA14 0.45 IKLFDK_17145 DNA helicase RecQ 0.76 IKLFDK_29815 carbamoyl-phosphate synthase large subunit low > 98
Pseudomonas aeruginosa MRSN321 0.45 DY961_RS00140 recQ;go_function=DNA DNA helicase RecQ 0.76 DY961_RS09535 carB;go_function=ATP carbamoyl-phosphate synthase large subunit low > 100
Pseudomonas sp. RS175 0.45 PFR28_00788 ATP-dependent DNA helicase RecQ 0.76 PFR28_00077 Carbamoyl-phosphate synthase large chain
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_4423 ATP-dependent DNA helicase RecQ 0.76 PfGW456L13_5099 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Marinobacter adhaerens HP15 0.45 HP15_1718 ATP-dependent DNA helicase RecQ 0.75 HP15_3077 carbamoyl-phosphate synthase, large subunit
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS19925 DNA helicase RecQ 0.69 ABZR86_RS05600 carbamoyl-phosphate synthase large subunit
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_04050 ATP-dependent DNA helicase RecQ 0.75 AO356_07480 carbamoyl phosphate synthase large subunit low > 104
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS13000 DNA helicase RecQ 0.69 LRK54_RS18000 carbamoyl-phosphate synthase large subunit
Pseudomonas segetis P6 0.45 MPMX49_02936 ATP-dependent DNA helicase RecQ 0.75 MPMX49_01187 Carbamoyl-phosphate synthase large chain
Pseudomonas sp. S08-1 0.45 OH686_20670 ATP-dependent DNA helicase RecQ 0.75 OH686_17080 Carbamoyl-phosphate synthase large chain
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_2645 ATP-dependent DNA helicase RecQ 0.75 Pf6N2E2_3364 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Rhodanobacter denitrificans MT42 0.45 LRK55_RS12700 DNA helicase RecQ 0.69 LRK55_RS17855 carbamoyl-phosphate synthase large subunit
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_3533 ATP-dependent DNA helicase RecQ 0.76 Pf1N1B4_1172 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pontibacter actiniarum KMM 6156, DSM 19842 0.45 CA264_07560 DNA helicase RecQ 0.43 CA264_15430 carbamoyl phosphate synthase large subunit low > 74
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ 0.76 Psyr_4191 carbamoyl-phosphate synthase large subunit
Pseudomonas sp. BP01 0.44 JOY50_RS01155 recQ DNA helicase RecQ 0.75 JOY50_RS26765 carB carbamoyl-phosphate synthase large subunit
Pseudomonas sp. DMC3 0.44 GFF2380 ATP-dependent DNA helicase RecQ 0.76 GFF4977 Carbamoyl-phosphate synthase large chain
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ 0.76 Psyr_4191 carbamoyl-phosphate synthase large subunit
Pseudomonas putida KT2440 0.44 PP_4516 ATP-dependent DNA 3 0.75 PP_4723 Carbamoyl-phosphate synthase large chain low > 96
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_18430 ATP-dependent DNA helicase RecQ 0.76 AO353_05630 carbamoyl phosphate synthase large subunit
Pseudomonas fluorescens SBW25 0.44 PFLU_RS21920 DNA helicase RecQ 0.76 PFLU_RS25880 carbamoyl-phosphate synthase large subunit
Variovorax sp. OAS795 0.44 ABID97_RS03395 DNA helicase RecQ 0.66 ABID97_RS17080 carbamoyl-phosphate synthase large subunit
Pseudomonas orientalis W4I3 0.44 QF045_RS22070 DNA helicase RecQ 0.76 QF045_RS26295 carbamoyl-phosphate synthase large subunit
Pseudomonas simiae WCS417 0.44 PS417_19950 ATP-dependent DNA helicase RecQ 0.76 PS417_24040 carbamoyl phosphate synthase large subunit
Pseudomonas lactucae CFBP13502 0.44 GEMAOFIL_04187 ATP-dependent DNA helicase RecQ 0.76 GEMAOFIL_04958 Carbamoyl-phosphate synthase large chain
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS21920 DNA helicase RecQ 0.76 PFLU_RS25880 carbamoyl-phosphate synthase large subunit
Rhodanobacter sp000427505 FW510-R12 0.44 LRK53_RS15600 DNA helicase RecQ 0.69 LRK53_RS11360 carbamoyl-phosphate synthase large subunit
Pseudomonas stutzeri RCH2 0.44 Psest_1869 ATP-dependent DNA helicase RecQ 0.75 Psest_0968 carbamoyl-phosphate synthase, large subunit
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS02465 ATP-dependent DNA helicase RecQ 0.67 HSERO_RS06925 carbamoyl phosphate synthase large subunit
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_02375 recQ DNA helicase RecQ 0.69 OKGIIK_07295 carB carbamoyl-phosphate synthase large subunit low > 53
Rhizobium sp. OAE497 0.44 ABIE40_RS12745 DNA helicase RecQ 0.59 ABIE40_RS12815 carbamoyl-phosphate synthase large subunit
Agrobacterium fabrum C58 0.44 Atu0061 ATP-dependent DNA helicase 0.58 Atu2178 carbamoylphosphate synthase large subunit
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.1476.1 ATP-dependent DNA helicase RecQ 0.69 Xcc-8004.2912.1 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Methylophilus sp. DMC18 0.43 GFF2139 ATP-dependent DNA helicase RecQ 0.73 GFF312 Carbamoyl-phosphate synthase large chain
Magnetospirillum magneticum AMB-1 0.43 AMB_RS21505 DNA helicase RecQ 0.61 AMB_RS03605 carbamoyl-phosphate synthase large subunit
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS28295 DNA helicase RecQ 0.66 QEN71_RS04780 carbamoyl-phosphate synthase large subunit
Dinoroseobacter shibae DFL-12 0.43 Dshi_3334 ATP-dependent DNA helicase RecQ (RefSeq) 0.59 Dshi_2639 carbamoyl-phosphate synthase, large subunit (RefSeq) low > 64
Paraburkholderia graminis OAS925 0.43 ABIE53_003792 ATP-dependent DNA helicase RecQ 0.66 ABIE53_003004 carbamoyl-phosphate synthase large subunit
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS18145 ATP-dependent DNA helicase RecQ 0.66 BPHYT_RS14190 carbamoyl phosphate synthase large subunit low > 109
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS02880 DNA helicase RecQ 0.67 ABZR87_RS14140 carbamoyl-phosphate synthase large subunit
Phaeobacter inhibens DSM 17395 0.42 PGA1_c31900 ATP-dependent DNA helicase RecQ 0.58 PGA1_c24560 carbamoyl-phosphate synthase large chain low > 62
Mucilaginibacter yixingensis YX-36 DSM 26809 0.42 ABZR88_RS20865 DNA helicase RecQ 0.44 ABZR88_RS20475 carbamoyl-phosphate synthase large subunit
Echinicola vietnamensis KMM 6221, DSM 17526 0.42 Echvi_0784 ATP-dependent DNA helicase RecQ 0.43 Echvi_0768 carbamoyl-phosphate synthase, large subunit
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS19310 ATP-dependent DNA helicase RecQ 0.66 RR42_RS13510 carbamoyl phosphate synthase large subunit
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_06595 ATP-dependent DNA helicase RecQ 0.66 H281DRAFT_04403 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum GMI1000 0.42 RS_RS15155 DNA helicase RecQ 0.66 RS_RS07630 carbamoyl-phosphate synthase large chain
Dechlorosoma suillum PS 0.42 Dsui_3092 ATP-dependent DNA helicase RecQ 0.68 Dsui_3064 carbamoyl-phosphate synthase, large subunit
Ralstonia solanacearum PSI07 0.42 RPSI07_RS10025 DNA helicase RecQ 0.67 RPSI07_RS15255 carbamoyl-phosphate synthase large subunit
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF1958 ATP-dependent DNA helicase RecQ 0.66 GFF4898 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS07220 DNA helicase RecQ 0.67 RALBFv3_RS02190 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum UW163 0.42 UW163_RS06400 DNA helicase RecQ 0.67 UW163_RS15500 carbamoyl-phosphate synthase large subunit
Azospirillum brasilense Sp245 0.42 AZOBR_RS02840 ATP-dependent DNA helicase RecQ 0.59 AZOBR_RS12895 carbamoyl phosphate synthase large subunit
Lysobacter sp. OAE881 0.42 ABIE51_RS05145 DNA helicase RecQ 0.69 ABIE51_RS11615 carbamoyl-phosphate synthase large subunit low > 62
Sinorhizobium meliloti 1021 0.42 SMc01566 ATP-dependent DNA helicase 0.59 SMc01215 carbamoyl phosphate synthase large subunit low > 103
Variovorax sp. SCN45 0.42 GFF6415 ATP-dependent DNA helicase RecQ 0.66 GFF376 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Acidovorax sp. GW101-3H11 0.41 Ac3H11_3308 ATP-dependent DNA helicase RecQ 0.67 Ac3H11_436 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Rhodopseudomonas palustris CGA009 0.41 TX73_025080 DNA helicase RecQ 0.60 TX73_021090 carbamoyl-phosphate synthase large subunit
Phocaeicola vulgatus CL09T03C04 0.41 HMPREF1058_RS14585 DNA helicase RecQ 0.36 HMPREF1058_RS06870 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit low > 67
Bosea sp. OAE506 0.41 ABIE41_RS04160 DNA helicase RecQ 0.57 ABIE41_RS11910 carbamoyl-phosphate synthase large subunit
Azospirillum sp. SherDot2 0.41 MPMX19_00123 ATP-dependent DNA helicase RecQ 0.59 MPMX19_02299 Carbamoyl-phosphate synthase large chain
Phocaeicola dorei CL03T12C01 0.41 ABI39_RS10235 DNA helicase RecQ 0.36 ABI39_RS20665 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit low > 72
Rhodospirillum rubrum S1H 0.40 Rru_A0089 ATP-dependent DNA helicase RecQ (NCBI) 0.61 Rru_A2886 Carbamoyl-phosphate synthase, large subunit, glutamine-dependent (NCBI) low > 58
Parabacteroides merdae CL09T00C40 0.40 HMPREF1078_RS01195 DNA helicase RecQ 0.36 HMPREF1078_RS01300 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit low > 61
Castellaniella sp019104865 MT123 0.40 ABCV34_RS07985 DNA helicase RecQ 0.66 ABCV34_RS15510 carbamoyl-phosphate synthase large subunit
Bacteroides stercoris CC31F 0.40 HMPREF1181_RS14110 DNA helicase RecQ 0.35 HMPREF1181_RS16075 carbamoyl-phosphate synthase large subunit low > 56
Cellulophaga baltica 18 0.39 M666_RS16920 DNA helicase RecQ 0.42 M666_RS18155 carbamoyl-phosphate synthase large subunit low > 67
Bacteroides thetaiotaomicron VPI-5482 0.39 BT1848 ATP-dependent DNA helicase recQ (NCBI ptt file) 0.36 BT0557 carbamyl phosphate synthetase (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.38 BACOVA_04594 ATP-dependent DNA helicase RecQ 0.36 BACOVA_03752 carbamoyl-phosphate synthase, large subunit low > 96
Sphingobium sp. HT1-2 0.38 GFF798 ATP-dependent DNA helicase RecQ 0.59 GFF2087 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Brevundimonas sp. GW460-12-10-14-LB2 0.37 A4249_RS14575 DNA helicase RecQ 0.59 A4249_RS00725 carbamoyl-phosphate synthase large subunit
Sphingomonas koreensis DSMZ 15582 0.37 Ga0059261_2261 ATP-dependent DNA helicase RecQ 0.60 Ga0059261_0007 carbamoyl-phosphate synthase, large subunit
Pedobacter sp. GW460-11-11-14-LB5 0.36 CA265_RS08905 DNA helicase RecQ 0.43 CA265_RS20080 carbamoyl phosphate synthase large subunit
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_03578 ATP-dependent DNA helicase recQ 0.60 CCNA_02994 carbamoyl-phosphate synthase large chain low > 67
Caulobacter crescentus NA1000 0.35 CCNA_03578 ATP-dependent DNA helicase recQ 0.60 CCNA_02994 carbamoyl-phosphate synthase large chain
Fusobacterium nucleatum SB010 0.35 HUW76_07235 DNA helicase RecQ 0.46 HUW76_08750 carbamoyl-phosphate synthase large subunit low > 35
Bifidobacterium breve UCC2003 0.32 BBR_RS13150 DNA helicase RecQ 0.49 BBR_RS13635 carbamoyl-phosphate synthase large subunit low > 34

Not shown: 0 genomes with orthologs for CSW01_01045 only; 10 genomes with orthologs for CSW01_12100 only