Conservation of cofitness between CSW01_17900 and CSW01_03330 in Vibrio cholerae E7946 ATCC 55056

108 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_17900 glycerol kinase 1.0 CSW01_03330 transcription elongation factor GreA 0.43 4
Enterobacter sp. TBS_079 0.81 MPMX20_04543 Glycerol kinase 0.66 MPMX20_04085 Transcription elongation factor GreA low > 85
Enterobacter asburiae PDN3 0.81 EX28DRAFT_4399 glycerol kinase 0.66 EX28DRAFT_3232 transcription elongation factor GreA low > 76
Escherichia coli BL21 0.80 ECD_03811 glycerol kinase 0.68 ECD_03046 transcript cleavage factor low > 61
Escherichia coli BW25113 0.80 b3926 glpK glycerol kinase (NCBI) 0.68 b3181 greA transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) low > 76
Escherichia coli ECRC62 0.80 BNILDI_05620 glpK glycerol kinase GlpK 0.68 BNILDI_01690 greA transcription elongation factor GreA low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.80 OHPLBJKB_04125 Glycerol kinase 0.68 OHPLBJKB_00519 Transcription elongation factor GreA low > 74
Escherichia coli ECRC101 0.80 MCAODC_04275 glpK glycerol kinase GlpK 0.68 MCAODC_08565 greA transcription elongation factor GreA 0.73 11
Escherichia coli ECOR27 0.80 NOLOHH_05910 glpK glycerol kinase GlpK 0.68 NOLOHH_09845 greA transcription elongation factor GreA 0.49 74
Escherichia coli ECRC102 0.80 NIAGMN_11530 glpK glycerol kinase GlpK 0.68 NIAGMN_15805 greA transcription elongation factor GreA 0.75 33
Escherichia fergusonii Becca 0.80 EFB2_04692 Glycerol kinase 0.68 EFB2_00642 Transcription elongation factor GreA low > 86
Escherichia coli ECRC99 0.80 KEDOAH_14385 glpK glycerol kinase GlpK 0.68 KEDOAH_10105 greA transcription elongation factor GreA — —
Escherichia coli ECRC98 0.80 JDDGAC_17400 glpK glycerol kinase GlpK 0.68 JDDGAC_21670 greA transcription elongation factor GreA 0.53 30
Escherichia coli ECRC100 0.80 OKFHMN_13775 glpK glycerol kinase GlpK 0.68 OKFHMN_18045 greA transcription elongation factor GreA low > 79
Escherichia coli ECOR38 0.80 HEPCGN_12420 glpK glycerol kinase GlpK 0.68 HEPCGN_16920 greA transcription elongation factor GreA low > 88
Escherichia coli Nissle 1917 0.80 ECOLIN_RS22610 glycerol kinase GlpK 0.68 ECOLIN_RS18320 transcription elongation factor GreA — —
Klebsiella michiganensis M5al 0.80 BWI76_RS27515 glycerol kinase 0.66 BWI76_RS25160 transcription elongation factor GreA low > 92
Klebsiella pneumoniae MKP103 0.80 KDGMDA_08190 glycerol kinase GlpK 0.67 KDGMDA_05975 transcription elongation factor GreA low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF2307 Glycerol kinase (EC 2.7.1.30) 0.67 GFF2922 Transcription elongation factor GreA low > 78
Rahnella sp. WP5 0.80 EX31_RS14270 glycerol kinase GlpK 0.64 EX31_RS08595 transcription elongation factor GreA low > 89
Serratia liquefaciens MT49 0.79 IAI46_24600 glycerol kinase GlpK 0.63 IAI46_01880 transcription elongation factor GreA low > 86
Dickeya dianthicola 67-19 0.79 HGI48_RS20485 glycerol kinase GlpK 0.65 HGI48_RS03185 transcription elongation factor GreA low > 71
Dickeya dianthicola ME23 0.79 DZA65_RS21530 glycerol kinase GlpK 0.65 DZA65_RS03180 transcription elongation factor GreA low > 75
Dickeya dadantii 3937 0.79 DDA3937_RS00890 glycerol kinase GlpK 0.66 DDA3937_RS03015 transcription elongation factor GreA — —
Pectobacterium carotovorum WPP14 0.78 HER17_RS00825 glycerol kinase GlpK 0.65 HER17_RS18330 transcription elongation factor GreA — —
Pantoea sp. MT58 0.77 IAI47_00825 glycerol kinase GlpK 0.64 IAI47_17080 transcription elongation factor GreA low > 76
Pantoea agglomerans CFBP13505 P0401 0.77 PagCFBP13505_RS18515 glycerol kinase GlpK 0.64 PagCFBP13505_RS09175 transcription elongation factor GreA low > 74
Erwinia tracheiphila SCR3 0.76 LU632_RS19705 glpK glycerol kinase GlpK 0.58 LU632_RS21165 greA transcription elongation factor GreA low > 74
Erwinia tracheiphila HP pepo 2.2 0.76 IJEDHG_12960 glpK glycerol kinase GlpK 0.58 IJEDHG_13865 greA transcription elongation factor GreA low > 61
Erwinia amylovora T8 0.76 OLJFJH_06040 glycerol kinase GlpK 0.63 OLJFJH_07185 transcription elongation factor GreA low > 58
Pseudomonas aeruginosa PA14 0.74 IKLFDK_18290 glycerol kinase GlpK 0.65 IKLFDK_29820 transcription elongation factor GreA 0.65 50
Pseudomonas sp. SVBP6 0.73 COO64_RS16800 glpK glycerol kinase GlpK 0.55 COO64_RS15235 greA transcription elongation factor GreA low > 93
Pseudomonas sp. DMC3 0.72 GFF5107 Glycerol kinase 0.55 GFF4978 Transcription elongation factor GreA low > 89
Pseudomonas sp. BP01 0.72 JOY50_RS14870 glpK glycerol kinase GlpK 0.57 JOY50_RS26770 greA transcription elongation factor GreA low > 84
Pseudomonas fluorescens GW456-L13 0.72 PfGW456L13_1734 Glycerol kinase (EC 2.7.1.30) 0.56 PfGW456L13_5098 Transcription elongation factor GreA — —
Pseudomonas putida KT2440 0.72 PP_1075 glycerol kinase 0.56 PP_4722 Transcription elongation factor GreA low > 96
Pseudomonas fluorescens FW300-N1B4 0.72 Pf1N1B4_767 Glycerol kinase (EC 2.7.1.30) 0.56 Pf1N1B4_1171 Transcription elongation factor GreA — —
Pseudomonas simiae WCS417 0.72 PS417_05575 Glycerol kinase (EC 2.7.1.30) (from data) 0.56 PS417_24035 transcription elongation factor GreA — —
Pseudomonas lactucae CFBP13502 0.72 GEMAOFIL_01302 Glycerol kinase 0.55 GEMAOFIL_04957 Transcription elongation factor GreA 0.69 65
Pseudomonas fluorescens SBW25 0.72 PFLU_RS05660 glycerol kinase GlpK 0.55 PFLU_RS25875 transcription elongation factor GreA low > 109
Pseudomonas fluorescens FW300-N2E3 0.72 AO353_04180 glycerol kinase 0.56 AO353_05625 transcription elongation factor GreA low > 101
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS05660 glycerol kinase GlpK 0.55 PFLU_RS25875 transcription elongation factor GreA low > 109
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_18250 glycerol kinase 0.58 AO356_07475 transcription elongation factor GreA — —
Pseudomonas sp. RS175 0.72 PFR28_03368 Glycerol kinase 0.59 PFR28_00078 Transcription elongation factor GreA — —
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_5574 Glycerol kinase (EC 2.7.1.30) 0.58 Pf6N2E2_3363 Transcription elongation factor GreA — —
Shewanella loihica PV-4 0.72 Shew_3466 glycerol kinase (RefSeq) 0.71 Shew_2837 transcription elongation factor GreA (RefSeq) low > 60
Pseudomonas syringae pv. syringae B728a ΔmexB 0.71 Psyr_3905 glycerol kinase 0.56 Psyr_4190 transcription elongation factor GreA — —
Pseudomonas syringae pv. syringae B728a 0.71 Psyr_3905 glycerol kinase 0.56 Psyr_4190 transcription elongation factor GreA — —
Shewanella sp. ANA-3 0.71 Shewana3_3756 glycerol kinase (RefSeq) 0.71 Shewana3_1017 transcription elongation factor GreA (RefSeq) low > 73
Shewanella oneidensis MR-1 0.71 SO4230 glpK glycerol kinase (NCBI ptt file) 0.71 SO1191 greA transcription elongation factor GreA (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.70 Sama_0341 glycerol kinase (RefSeq) 0.69 Sama_0951 GreA/GreB family elongation factor (RefSeq) low > 62
Pseudomonas stutzeri RCH2 0.70 Psest_2773 glycerol kinase 0.61 Psest_0969 transcription elongation factor GreA low > 67
Acinetobacter baumannii LAC-4 0.69 RR41_RS04245 glycerol kinase GlpK 0.60 RR41_RS04150 transcription elongation factor GreA — —
Pedobacter sp. GW460-11-11-14-LB5 0.62 CA265_RS07870 glycerol kinase 0.35 CA265_RS23190 transcription elongation factor GreA low > 88
Burkholderia phytofirmans PsJN 0.60 BPHYT_RS16495 glycerol kinase 0.53 BPHYT_RS14185 transcription elongation factor GreA low > 109
Paraburkholderia graminis OAS925 0.60 ABIE53_003469 glycerol kinase 0.53 ABIE53_003003 transcription elongation factor GreA low > 113
Paraburkholderia bryophila 376MFSha3.1 0.60 H281DRAFT_04229 glycerol kinase 0.52 H281DRAFT_04404 GreA/GreB family elongation factor low > 103
Xanthomonas campestris pv. campestris strain 8004 0.60 Xcc-8004.469.1 Glycerol kinase (EC 2.7.1.30) 0.57 Xcc-8004.2911.1 Transcription elongation factor GreA low > 74
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS20035 glycerol kinase GlpK 0.43 ABZR86_RS05595 transcription elongation factor GreA low > 74
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS02230 glycerol kinase GlpK 0.52 QEN71_RS04785 transcription elongation factor GreA 0.76 152
Desulfovibrio vulgaris Miyazaki F 0.59 DvMF_0809 glycerol kinase (RefSeq) 0.43 DvMF_0383 greA transcription elongation factor GreA (RefSeq) low > 51
Pontibacter actiniarum KMM 6156, DSM 19842 0.59 CA264_11350 glycerol kinase 0.31 CA264_03870 transcription elongation factor GreA low > 74
Desulfovibrio vulgaris Hildenborough JW710 0.58 DVU3134 glpK glycerol kinase (TIGR) 0.46 DVU3245 greA transcription elongation factor GreA (TIGR) low > 55
Parabacteroides merdae CL09T00C40 0.56 HMPREF1078_RS00735 glycerol kinase GlpK 0.33 HMPREF1078_RS17725 transcription elongation factor GreA low > 61
Rhodanobacter sp000427505 FW510-R12 0.56 LRK53_RS17825 glycerol kinase GlpK 0.44 LRK53_RS11355 transcription elongation factor GreA low > 59
Echinicola vietnamensis KMM 6221, DSM 17526 0.56 Echvi_1770 glycerol kinase 0.31 Echvi_0180 transcription elongation factor GreA low > 79
Rhodanobacter denitrificans MT42 0.56 LRK55_RS06280 glycerol kinase GlpK 0.43 LRK55_RS17860 transcription elongation factor GreA low > 63
Rhodanobacter denitrificans FW104-10B01 0.56 LRK54_RS06535 glycerol kinase GlpK 0.43 LRK54_RS18005 transcription elongation factor GreA low > 59
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS13810 glycerol kinase 0.53 RR42_RS13505 transcription elongation factor GreA — —
Variovorax sp. SCN45 0.55 GFF2679 Glycerol kinase (EC 2.7.1.30) 0.48 GFF374 Transcription elongation factor GreA low > 127
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS04875 glycerol kinase 0.50 HSERO_RS06930 transcription elongation factor GreA — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.54 GFF2807 Glycerol kinase (EC 2.7.1.30) 0.50 GFF4897 Transcription elongation factor GreA low > 90
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS07395 glycerol kinase 0.55 RALBFv3_RS02185 transcription elongation factor GreA low > 76
Ralstonia solanacearum UW163 0.54 UW163_RS06225 glycerol kinase 0.55 UW163_RS15495 transcription elongation factor GreA — —
Rhodanobacter sp. FW510-T8 0.54 OKGIIK_00030 glpK glycerol kinase GlpK 0.43 OKGIIK_07290 greA transcription elongation factor GreA low > 52
Variovorax sp. OAS795 0.53 ABID97_RS19965 glycerol kinase GlpK 0.47 ABID97_RS17070 transcription elongation factor GreA low > 91
Ralstonia solanacearum PSI07 0.53 RPSI07_RS09850 glycerol kinase 0.55 RPSI07_RS15260 transcription elongation factor GreA low > 81
Ralstonia solanacearum GMI1000 0.53 RS_RS15335 glycerol kinase 0.54 RS_RS07635 transcription elongation factor GreA — —
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS03055 glycerol kinase GlpK 0.56 ABZR87_RS14135 transcription elongation factor GreA low > 80
Acidovorax sp. GW101-3H11 0.53 Ac3H11_789 Glycerol kinase (EC 2.7.1.30) 0.50 Ac3H11_437 Transcription elongation factor GreA low > 79
Castellaniella sp019104865 MT123 0.52 ABCV34_RS05865 glycerol kinase GlpK 0.50 ABCV34_RS15540 transcription elongation factor GreA low > 48
Alteromonas macleodii MIT1002 0.52 MIT1002_00198 Glycerol kinase 0.67 MIT1002_01468 Transcript cleavage factor GreA low > 70
Marinobacter adhaerens HP15 0.52 HP15_748 glycerol kinase 0.58 HP15_3076 protein containing prokaryotic transcription elongation factor GreA domain low > 73
Pseudomonas sp. S08-1 0.51 OH686_20375 glycerol kinase 0.58 OH686_17085 Transcription elongation factor GreA low > 80
Dinoroseobacter shibae DFL-12 0.51 Dshi_3420 Glycerol kinase (EC 2.7.1.30) (from data) 0.55 Dshi_3076 transcription elongation factor GreA (RefSeq) 0.19 41
Pseudomonas segetis P6 0.51 MPMX49_01432 Glycerol kinase 0.58 MPMX49_01188 Transcription elongation factor GreA low > 75
Sinorhizobium meliloti 1021 0.50 SM_b21009 Glycerol kinase (EC 2.7.1.30) (from data) 0.51 SMc01218 transcription elongation factor GreA — —
Acinetobacter radioresistens SK82 0.49 MPMX26_02393 Glycerol kinase 0.62 MPMX26_00765 Transcription elongation factor GreA low > 36
Mycobacterium tuberculosis H37Rv 0.49 Rv3696c Probable glycerol kinase GlpK (ATP:glycerol 3-phosphotransferase) (glycerokinase) (GK) 0.24 Rv1080c Probable transcription elongation factor GreA (transcript cleavage factor GreA) — —
Agrobacterium fabrum C58 0.49 Atu3890 glycerol kinase 0.52 Atu2182 transcription elongation facto — —
Azospirillum brasilense Sp245 0.48 AZOBR_RS25905 glycerol kinase 0.50 AZOBR_RS12900 transcription elongation factor GreA — —
Azospirillum sp. SherDot2 0.48 MPMX19_05974 Glycerol kinase 0.52 MPMX19_02300 Transcription elongation factor GreA low > 112
Phaeobacter inhibens DSM 17395 0.48 PGA1_c32030 glycerol kinase GlpK 0.53 PGA1_c03290 transcription elongation factor GreA low > 62
Sphingobium sp. HT1-2 0.48 GFF2014 Glycerol kinase (EC 2.7.1.30) 0.47 GFF2086 Transcription elongation factor GreA — —
Phocaeicola dorei CL03T12C01 0.47 ABI39_RS01980 glycerol kinase GlpK 0.36 ABI39_RS04145 transcription elongation factor GreA low > 72
Bosea sp. OAE506 0.47 ABIE41_RS15215 glycerol kinase GlpK 0.50 ABIE41_RS11905 transcription elongation factor GreA — —
Rhodospirillum rubrum S1H 0.47 Rru_A2009 Glycerol kinase (NCBI) 0.49 Rru_A2887 GreA/GreB family elongation factor (NCBI) low > 58
Phocaeicola vulgatus CL09T03C04 0.47 HMPREF1058_RS02700 glycerol kinase GlpK 0.35 HMPREF1058_RS12565 transcription elongation factor GreA — —
Rhodopseudomonas palustris CGA009 0.46 TX73_019190 glycerol kinase GlpK 0.49 TX73_021095 transcription elongation factor GreA — —
Xanthobacter sp. DMC5 0.45 GFF4168 Glycerol kinase 0.49 GFF4682 Transcription elongation factor GreA — —
Brevundimonas sp. GW460-12-10-14-LB2 0.43 A4249_RS13260 glycerol kinase GlpK 0.55 A4249_RS00695 transcription elongation factor GreA — —
Caulobacter crescentus NA1000 0.42 CCNA_01281 glycerol kinase 0.56 CCNA_02941 transcription elongation factor greA low > 66
Caulobacter crescentus NA1000 Δfur 0.42 CCNA_01281 glycerol kinase 0.56 CCNA_02941 transcription elongation factor greA low > 67
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_0833 Glycerol kinase 0.50 Ga0059261_0008 transcription elongation factor GreA — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.38 ABZR88_RS15235 glycerol kinase GlpK 0.36 ABZR88_RS00130 transcription elongation factor GreA low > 71
Kangiella aquimarina DSM 16071 0.12 B158DRAFT_0456 Sugar (pentulose and hexulose) kinases 0.58 B158DRAFT_0617 transcription elongation factor GreA low > 40
Bacteroides thetaiotaomicron VPI-5482 0.11 BT4423 xylulose kinase (NCBI ptt file) 0.34 BT2565 transcription elongation factor greA (NCBI ptt file) — —
Cellulophaga baltica 18 0.06 M666_RS09535 FGGY family carbohydrate kinase 0.36 M666_RS03160 transcription elongation factor GreA low > 67
Bacteroides ovatus ATCC 8483 0.06 BACOVA_03601 rhamnulokinase 0.34 BACOVA_01643 prokaryotic transcription elongation factor, GreA/GreB domain protein low > 96

Not shown: 3 genomes with orthologs for CSW01_17900 only; 5 genomes with orthologs for CSW01_03330 only