Conservation of cofitness between CSW01_12105 and CSW01_01045 in Vibrio cholerae E7946 ATCC 55056

113 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12105 carbamoyl-phosphate synthase small subunit 1.0 CSW01_01045 DNA helicase RecQ 0.73 6
Enterobacter asburiae PDN3 0.85 EX28DRAFT_3637 carbamoyl-phosphate synthase, small subunit 0.66 EX28DRAFT_4487 ATP-dependent DNA helicase RecQ
Escherichia coli BW25113 0.84 b0032 carA carbamoyl-phosphate synthase small subunit (NCBI) 0.67 b3822 recQ ATP-dependent DNA helicase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.84 OHPLBJKB_03625 Carbamoyl-phosphate synthase small chain 0.67 OHPLBJKB_04229 ATP-dependent DNA helicase RecQ low > 74
Escherichia coli BL21 0.84 ECD_00036 carbamoyl phosphate synthetase small subunit, glutamine amidotransferase 0.66 ECD_03701 ATP-dependent DNA helicase low > 61
Escherichia coli ECRC101 0.84 MCAODC_01460 carA carbamoyl phosphate synthase small subunit 0.67 MCAODC_04865 recQ ATP-dependent DNA helicase RecQ low > 87
Escherichia coli ECRC102 0.84 NIAGMN_08795 carA carbamoyl phosphate synthase small subunit 0.67 NIAGMN_12115 recQ ATP-dependent DNA helicase RecQ low > 80
Escherichia coli ECRC98 0.84 JDDGAC_14540 carA carbamoyl phosphate synthase small subunit 0.67 JDDGAC_17985 recQ ATP-dependent DNA helicase RecQ low > 87
Escherichia coli ECRC62 0.84 BNILDI_08325 carA carbamoyl phosphate synthase small subunit 0.67 BNILDI_05040 recQ ATP-dependent DNA helicase RecQ low > 75
Escherichia coli ECOR27 0.84 NOLOHH_03275 carA carbamoyl phosphate synthase small subunit 0.67 NOLOHH_06490 recQ ATP-dependent DNA helicase RecQ low > 76
Escherichia coli ECRC99 0.84 KEDOAH_17210 carA carbamoyl phosphate synthase small subunit 0.67 KEDOAH_13790 recQ ATP-dependent DNA helicase RecQ
Escherichia coli ECRC100 0.84 OKFHMN_10945 carA carbamoyl phosphate synthase small subunit 0.67 OKFHMN_14360 recQ ATP-dependent DNA helicase RecQ low > 79
Escherichia coli Nissle 1917 0.84 ECOLIN_RS00175 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.67 ECOLIN_RS21935 ATP-dependent DNA helicase RecQ low > 55
Escherichia fergusonii Becca 0.84 EFB2_04013 Carbamoyl-phosphate synthase small chain 0.67 EFB2_04815 ATP-dependent DNA helicase RecQ low > 86
Klebsiella michiganensis M5al 0.84 BWI76_RS04465 carbamoyl-phosphate synthase small subunit 0.66 BWI76_RS01245 DNA helicase RecQ low > 92
Escherichia coli ECOR38 0.84 HEPCGN_08930 carA carbamoyl phosphate synthase small subunit 0.67 HEPCGN_13060 recQ ATP-dependent DNA helicase RecQ low > 88
Klebsiella pneumoniae MKP103 0.84 KDGMDA_12705 carbamoyl phosphate synthase small subunit 0.67 KDGMDA_09735 ATP-dependent DNA helicase RecQ low > 95
Rahnella sp. WP5 0.83 EX31_RS03835 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.65 EX31_RS15210 ATP-dependent DNA helicase RecQ low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF214 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.65 GFF248 ATP-dependent DNA helicase RecQ low > 78
Pectobacterium carotovorum WPP14 0.82 HER17_RS02895 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.65 HER17_RS01395 ATP-dependent DNA helicase RecQ low > 75
Enterobacter sp. TBS_079 0.82 MPMX20_00739 Carbamoyl-phosphate synthase small chain 0.66 MPMX20_04458 ATP-dependent DNA helicase RecQ low > 85
Dickeya dadantii 3937 0.81 DDA3937_RS18310 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.66 DDA3937_RS19850 ATP-dependent DNA helicase RecQ low > 74
Dickeya dianthicola ME23 0.81 DZA65_RS19385 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.66 DZA65_RS21045 ATP-dependent DNA helicase RecQ low > 75
Dickeya dianthicola 67-19 0.81 HGI48_RS18245 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.66 HGI48_RS20005 ATP-dependent DNA helicase RecQ low > 71
Shewanella amazonensis SB2B 0.80 Sama_2504 carbamoyl phosphate synthase small subunit (RefSeq) 0.57 Sama_0333 ATP-dependent DNA helicase RecQ (RefSeq) low > 62
Serratia liquefaciens MT49 0.80 IAI46_03190 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.66 IAI46_00770 ATP-dependent DNA helicase RecQ low > 87
Shewanella oneidensis MR-1 0.80 SO1141 carA carbamoyl-phosphate synthase, small subunit (NCBI ptt file) 0.58 SO4241 recQ ATP-dependent DNA helicase RecQ (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.80 Shew_2839 carbamoyl phosphate synthase small subunit (RefSeq) 0.58 Shew_3474 ATP-dependent DNA helicase RecQ (RefSeq) low > 60
Pantoea agglomerans CFBP13505 P0401 0.80 PagCFBP13505_RS12875 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.66 PagCFBP13505_RS15340 ATP-dependent DNA helicase RecQ low > 74
Shewanella sp. ANA-3 0.80 Shewana3_0967 carbamoyl phosphate synthase small subunit (RefSeq) 0.59 Shewana3_3763 ATP-dependent DNA helicase RecQ (RefSeq) low > 73
Pantoea sp. MT58 0.79 IAI47_16120 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.67 IAI47_18360 ATP-dependent DNA helicase RecQ low > 76
Erwinia amylovora T8 0.79 OLJFJH_01400 carbamoyl phosphate synthase small subunit 0.66 OLJFJH_06445 ATP-dependent DNA helicase RecQ low > 58
Alteromonas macleodii MIT1002 0.77 MIT1002_01466 Carbamoyl-phosphate synthase small chain 0.54 MIT1002_00148 ATP-dependent DNA helicase RecQ low > 70
Erwinia tracheiphila SCR3 0.76 LU632_RS02755 carA glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.66 LU632_RS24095 recQ ATP-dependent DNA helicase RecQ low > 73
Erwinia tracheiphila HP pepo 2.2 0.76 IJEDHG_06140 carA carbamoyl phosphate synthase small subunit 0.66 IJEDHG_08740 recQ ATP-dependent DNA helicase RecQ low > 61
Pseudomonas aeruginosa PA14 0.75 IKLFDK_29805 carbamoyl phosphate synthase small subunit 0.45 IKLFDK_17145 DNA helicase RecQ
Pseudomonas sp. SVBP6 0.75 COO64_RS15245 carA glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.46 COO64_RS21845 recQ DNA helicase RecQ low > 93
Pseudomonas aeruginosa MRSN321 0.74 DY961_RS09545 carA;go_component=carbamoyl-phosphate glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.45 DY961_RS00140 recQ;go_function=DNA DNA helicase RecQ
Pseudomonas orientalis W4I3 0.74 QF045_RS26300 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.44 QF045_RS22070 DNA helicase RecQ
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_05635 carbamoyl phosphate synthase small subunit 0.44 AO353_18430 ATP-dependent DNA helicase RecQ
Pseudomonas aeruginosa PUPa3 0.74 DQ20_RS52490 carA;go_component=carbamoyl-phosphate glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.45 DQ20_RS40870 recQ;go_function=DNA DNA helicase RecQ low > 101
Pseudomonas fluorescens GW456-L13 0.74 PfGW456L13_5100 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.45 PfGW456L13_4423 ATP-dependent DNA helicase RecQ
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_3365 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.45 Pf6N2E2_2645 ATP-dependent DNA helicase RecQ
Pseudomonas sp. DMC3 0.74 GFF4976 Carbamoyl-phosphate synthase small chain 0.44 GFF2380 ATP-dependent DNA helicase RecQ
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_07485 carbamoyl phosphate synthase small subunit 0.45 AO356_04050 ATP-dependent DNA helicase RecQ
Pseudomonas fluorescens FW300-N1B4 0.74 Pf1N1B4_1173 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.45 Pf1N1B4_3533 ATP-dependent DNA helicase RecQ
Pseudomonas sp. RS175 0.74 PFR28_00076 Carbamoyl-phosphate synthase small chain 0.45 PFR28_00788 ATP-dependent DNA helicase RecQ
Pseudomonas simiae WCS417 0.74 PS417_24045 carbamoyl phosphate synthase small subunit 0.44 PS417_19950 ATP-dependent DNA helicase RecQ
Pseudomonas putida KT2440 0.74 PP_4724 Carbamoyl-phosphate synthase small chain 0.44 PP_4516 ATP-dependent DNA 3 low > 96
Pseudomonas sp. BP01 0.73 JOY50_RS26760 carA glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.44 JOY50_RS01155 recQ DNA helicase RecQ
Pseudomonas sp. S08-1 0.73 OH686_17075 Carbamoyl-phosphate synthase small chain 0.45 OH686_20670 ATP-dependent DNA helicase RecQ
Pseudomonas fluorescens SBW25 0.73 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.44 PFLU_RS21920 DNA helicase RecQ
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.44 PFLU_RS21920 DNA helicase RecQ
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_4192 carbamoyl-phosphate synthase small subunit 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_4192 carbamoyl-phosphate synthase small subunit 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ
Pseudomonas segetis P6 0.73 MPMX49_01186 Carbamoyl-phosphate synthase small chain 0.45 MPMX49_02936 ATP-dependent DNA helicase RecQ
Pseudomonas lactucae CFBP13502 0.73 GEMAOFIL_04959 Carbamoyl-phosphate synthase small chain 0.44 GEMAOFIL_04187 ATP-dependent DNA helicase RecQ low > 96
Pseudomonas stutzeri RCH2 0.72 Psest_0967 carbamoyl-phosphate synthase, small subunit 0.44 Psest_1869 ATP-dependent DNA helicase RecQ
Methylophilus sp. DMC18 0.72 GFF311 Carbamoyl-phosphate synthase small chain 0.43 GFF2139 ATP-dependent DNA helicase RecQ
Marinobacter adhaerens HP15 0.71 HP15_3078 carbamoyl-phosphate synthase small chain 0.45 HP15_1718 ATP-dependent DNA helicase RecQ low > 73
Cupriavidus basilensis FW507-4G11 0.70 RR42_RS13520 carbamoyl phosphate synthase small subunit 0.42 RR42_RS19310 ATP-dependent DNA helicase RecQ
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS14150 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.42 ABZR87_RS02880 DNA helicase RecQ
Dechlorosoma suillum PS 0.68 Dsui_3065 carbamoyl-phosphate synthase, small subunit 0.42 Dsui_3092 ATP-dependent DNA helicase RecQ
Ralstonia solanacearum PSI07 0.68 RPSI07_RS15245 carbamoyl-phosphate synthase small subunit 0.42 RPSI07_RS10025 DNA helicase RecQ
Paraburkholderia sabiae LMG 24235 0.68 QEN71_RS04775 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.43 QEN71_RS28295 DNA helicase RecQ
Ralstonia solanacearum IBSBF1503 0.67 RALBFv3_RS02200 carbamoyl-phosphate synthase small subunit 0.42 RALBFv3_RS07220 DNA helicase RecQ
Ralstonia solanacearum UW163 0.67 UW163_RS15510 carbamoyl-phosphate synthase small subunit 0.42 UW163_RS06400 DNA helicase RecQ
Herbaspirillum seropedicae SmR1 0.67 HSERO_RS06920 carbamoyl phosphate synthase small subunit 0.44 HSERO_RS02465 ATP-dependent DNA helicase RecQ
Ralstonia solanacearum GMI1000 0.67 RS_RS07620 carbamoyl-phosphate synthase small subunit 0.42 RS_RS15155 DNA helicase RecQ
Lysobacter sp. OAE881 0.66 ABIE51_RS11625 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.42 ABIE51_RS05145 DNA helicase RecQ low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF4899 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.42 GFF1958 ATP-dependent DNA helicase RecQ
Rhodanobacter denitrificans FW104-10B01 0.66 LRK54_RS17995 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.45 LRK54_RS13000 DNA helicase RecQ
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_04402 carbamoyl-phosphate synthase small subunit 0.42 H281DRAFT_06595 ATP-dependent DNA helicase RecQ
Dyella japonica UNC79MFTsu3.2 0.66 ABZR86_RS05605 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.45 ABZR86_RS19925 DNA helicase RecQ
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS14195 carbamoyl phosphate synthase small subunit 0.43 BPHYT_RS18145 ATP-dependent DNA helicase RecQ low > 109
Paraburkholderia graminis OAS925 0.66 ABIE53_003005 carbamoyl-phosphate synthase small subunit 0.43 ABIE53_003792 ATP-dependent DNA helicase RecQ
Rhodanobacter denitrificans MT42 0.66 LRK55_RS17850 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.45 LRK55_RS12700 DNA helicase RecQ
Xanthomonas campestris pv. campestris strain 8004 0.65 Xcc-8004.2914.1 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.44 Xcc-8004.1476.1 ATP-dependent DNA helicase RecQ
Rhodanobacter sp. FW510-T8 0.65 OKGIIK_07300 carbamoyl phosphate synthase small subunit 0.44 OKGIIK_02375 recQ DNA helicase RecQ low > 53
Acidovorax sp. GW101-3H11 0.65 Ac3H11_435 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.41 Ac3H11_3308 ATP-dependent DNA helicase RecQ
Variovorax sp. OAS795 0.65 ABID97_RS17090 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.44 ABID97_RS03395 DNA helicase RecQ
Rhodanobacter sp000427505 FW510-R12 0.64 LRK53_RS11365 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.44 LRK53_RS15600 DNA helicase RecQ
Castellaniella sp019104865 MT123 0.64 ABCV34_RS15505 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.40 ABCV34_RS07985 DNA helicase RecQ
Variovorax sp. SCN45 0.64 GFF377 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.42 GFF6415 ATP-dependent DNA helicase RecQ
Azospirillum brasilense Sp245 0.53 AZOBR_RS10920 carbamoyl phosphate synthase small subunit 0.42 AZOBR_RS02840 ATP-dependent DNA helicase RecQ
Azospirillum sp. SherDot2 0.53 MPMX19_00757 Carbamoyl-phosphate synthase small chain 0.41 MPMX19_00123 ATP-dependent DNA helicase RecQ
Magnetospirillum magneticum AMB-1 0.52 AMB_RS03600 carbamoyl-phosphate synthase small subunit 0.43 AMB_RS21505 DNA helicase RecQ
Xanthobacter sp. DMC5 0.51 GFF3240 Carbamoyl-phosphate synthase small chain 0.47 GFF753 ATP-dependent DNA helicase RecQ
Rhodopseudomonas palustris CGA009 0.51 TX73_006555 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.41 TX73_025080 DNA helicase RecQ
Rhodospirillum rubrum S1H 0.50 Rru_A2885 Carbamoyl-phosphate synthase, small subunit (NCBI) 0.40 Rru_A0089 ATP-dependent DNA helicase RecQ (NCBI) low > 58
Brevundimonas sp. GW460-12-10-14-LB2 0.49 A4249_RS16140 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.37 A4249_RS14575 DNA helicase RecQ
Phaeobacter inhibens DSM 17395 0.49 PGA1_c06670 carbamoyl-phosphate synthase small chain 0.42 PGA1_c31900 ATP-dependent DNA helicase RecQ low > 62
Dinoroseobacter shibae DFL-12 0.49 Dshi_2387 carbamoyl-phosphate synthase, small subunit (RefSeq) 0.43 Dshi_3334 ATP-dependent DNA helicase RecQ (RefSeq)
Sphingobium sp. HT1-2 0.49 GFF2089 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.38 GFF798 ATP-dependent DNA helicase RecQ
Sphingomonas koreensis DSMZ 15582 0.48 Ga0059261_4243 carbamoyl-phosphate synthase, small subunit 0.37 Ga0059261_2261 ATP-dependent DNA helicase RecQ
Sinorhizobium meliloti 1021 0.48 SMc01569 carbamoyl phosphate synthase small subunit 0.42 SMc01566 ATP-dependent DNA helicase low > 103
Bosea sp. OAE506 0.48 ABIE41_RS11975 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.41 ABIE41_RS04160 DNA helicase RecQ
Caulobacter crescentus NA1000 Δfur 0.47 CCNA_02925 carbamoyl-phosphate synthase small chain 0.35 CCNA_03578 ATP-dependent DNA helicase recQ low > 67
Caulobacter crescentus NA1000 0.47 CCNA_02925 carbamoyl-phosphate synthase small chain 0.35 CCNA_03578 ATP-dependent DNA helicase recQ
Agrobacterium fabrum C58 0.47 Atu2170 carbamoylphosphate synthase small chain 0.44 Atu0061 ATP-dependent DNA helicase
Rhizobium sp. OAE497 0.47 ABIE40_RS12765 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.44 ABIE40_RS12745 DNA helicase RecQ
Fusobacterium nucleatum SB010 0.42 HUW76_08755 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.35 HUW76_07235 DNA helicase RecQ low > 35
Pontibacter actiniarum KMM 6156, DSM 19842 0.40 CA264_19490 carbamoyl phosphate synthase small subunit 0.45 CA264_07560 DNA helicase RecQ low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.40 Echvi_0226 carbamoyl-phosphate synthase, small subunit 0.42 Echvi_0784 ATP-dependent DNA helicase RecQ
Bifidobacterium breve UCC2003 0.40 BBR_RS13630 carbamoyl-phosphate synthase small subunit 0.32 BBR_RS13150 DNA helicase RecQ low > 34
Cellulophaga baltica 18 0.40 M666_RS00880 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.39 M666_RS16920 DNA helicase RecQ low > 67
Pedobacter sp. GW460-11-11-14-LB5 0.40 CA265_RS15240 carbamoyl phosphate synthase small subunit 0.36 CA265_RS08905 DNA helicase RecQ
Mucilaginibacter yixingensis YX-36 DSM 26809 0.39 ABZR88_RS17830 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.42 ABZR88_RS20865 DNA helicase RecQ
Bacteroides ovatus ATCC 8483 0.33 BACOVA_03753 carbamoyl-phosphate synthase, small subunit 0.38 BACOVA_04594 ATP-dependent DNA helicase RecQ low > 96
Phocaeicola vulgatus CL09T03C04 0.33 HMPREF1058_RS06875 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.41 HMPREF1058_RS14585 DNA helicase RecQ low > 67
Parabacteroides merdae CL09T00C40 0.33 HMPREF1078_RS01295 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.40 HMPREF1078_RS01195 DNA helicase RecQ low > 61
Phocaeicola dorei CL03T12C01 0.33 ABI39_RS20670 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.41 ABI39_RS10235 DNA helicase RecQ low > 72
Bacteroides thetaiotaomicron VPI-5482 0.32 BT0556 carbamoyl phosphate synthetase III (glutamine-hydrolyzing) (NCBI ptt file) 0.39 BT1848 ATP-dependent DNA helicase recQ (NCBI ptt file) low > 81
Bacteroides stercoris CC31F 0.32 HMPREF1181_RS16070 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.40 HMPREF1181_RS14110 DNA helicase RecQ low > 56

Not shown: 10 genomes with orthologs for CSW01_12105 only; 0 genomes with orthologs for CSW01_01045 only