Conservation of cofitness between CCNA_00270 and CCNA_01141 in Caulobacter crescentus NA1000

99 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Caulobacter crescentus NA1000 1.0 CCNA_00270 Recombination protein recR 1.0 CCNA_01141 RecA protein 0.77 10
Caulobacter crescentus NA1000 Δfur 1.00 CCNA_00270 Recombination protein recR 1.00 CCNA_01141 RecA protein — —
Brevundimonas sp. GW460-12-10-14-LB2 0.73 A4249_RS15115 recombination mediator RecR 0.85 A4249_RS12615 recombinase RecA low > 48
Magnetospirillum magneticum AMB-1 0.66 AMB_RS20755 recombination protein RecR 0.75 AMB_RS03205 DNA recombination/repair protein RecA low > 64
Azospirillum sp. SherDot2 0.65 MPMX19_02195 Recombination protein RecR 0.73 MPMX19_00869 Protein RecA — —
Azospirillum brasilense Sp245 0.64 AZOBR_RS03880 recombinase RecR 0.73 AZOBR_RS11095 recombinase RecA 0.51 29
Rhodospirillum rubrum S1H 0.63 Rru_A3471 RecR protein (NCBI) 0.76 Rru_A2819 RecA DNA recombination protein (NCBI) — —
Sphingomonas koreensis DSMZ 15582 0.63 Ga0059261_0645 DNA replication and repair protein RecR 0.75 Ga0059261_0204 protein RecA 0.53 9
Rhodopseudomonas palustris CGA009 0.63 TX73_003195 recombination mediator RecR 0.78 TX73_019940 recombinase RecA — —
Bosea sp. OAE506 0.62 ABIE41_RS04035 recombination mediator RecR 0.73 ABIE41_RS13335 recombinase RecA — —
Sinorhizobium meliloti 1021 0.61 SMc02908 recombination protein RecR 0.76 SMc00760 recombinase A 0.55 12
Agrobacterium fabrum C58 0.60 Atu0093 Recombination protein 0.76 Atu1874 RecA protein 0.62 3
Phaeobacter inhibens DSM 17395 0.59 PGA1_c30290 recombination protein RecR 0.72 PGA1_c15260 protein recA (recombinase A) 0.53 8
Rhizobium sp. OAE497 0.57 ABIE40_RS00300 recombination mediator RecR 0.76 ABIE40_RS10320 recombinase RecA low > 107
Dinoroseobacter shibae DFL-12 0.56 Dshi_0648 recombination protein RecR (RefSeq) 0.68 Dshi_1643 recA protein (RefSeq) 0.42 32
Acinetobacter radioresistens SK82 0.46 MPMX26_01643 Recombination protein RecR 0.66 MPMX26_01308 Protein RecA 0.51 5
Dechlorosoma suillum PS 0.42 Dsui_1811 recombination protein RecR 0.67 Dsui_0707 protein RecA 0.89 7
Fusobacterium nucleatum SB010 0.41 HUW76_08785 recombination protein RecR 0.57 HUW76_07355 recombinase RecA 0.97 8
Pseudomonas stutzeri RCH2 0.41 Psest_2545 recombination protein RecR 0.67 Psest_2872 protein RecA 0.29 15
Kangiella aquimarina DSM 16071 0.40 B158DRAFT_2480 DNA replication and repair protein RecR 0.68 B158DRAFT_1531 protein RecA 0.69 8
Pedobacter sp. GW460-11-11-14-LB5 0.40 CA265_RS04980 recombination protein RecR 0.62 CA265_RS00600 recombinase RecA 0.71 11
Pseudomonas sp. RS175 0.40 PFR28_01077 Recombination protein RecR 0.67 PFR28_00472 Protein RecA low > 88
Bifidobacterium breve UCC2003 0.40 BBR_RS10990 recombination protein RecR 0.64 BBR_RS16530 recombinase RecA 0.90 2
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_02495 recombination protein RecR 0.67 AO356_05670 recombinase RecA 0.44 16
Echinicola vietnamensis KMM 6221, DSM 17526 0.39 Echvi_1987 recombination protein RecR 0.61 Echvi_0044 protein RecA 0.50 25
Pseudomonas simiae WCS417 0.39 PS417_20800 recombination protein RecR 0.67 PS417_05815 recombinase RecA 0.41 9
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_2325 Recombination protein RecR 0.67 Pf6N2E2_2993 RecA protein — —
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_3864 Recombination protein RecR 0.66 Pf1N1B4_5514 RecA protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_00675 recombination protein RecR 0.67 AO353_16805 recombinase RecA 0.34 30
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS18355 recombinase RecR 0.65 HSERO_RS03270 protein RecA 0.59 11
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS22415 recombination protein RecR 0.67 PFLU_RS05885 recombinase RecA 0.19 77
Bacteroides thetaiotaomicron VPI-5482 0.39 BT1081 recombination protein recR (NCBI ptt file) 0.59 BT4610 RecA (NCBI ptt file) 0.32 72
Marinobacter adhaerens HP15 0.39 HP15_1883 recombination protein RecR 0.67 HP15_1048 recombinase A — —
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_4074 Recombination protein RecR 0.66 PfGW456L13_4668 RecA protein 0.33 16
Parabacteroides merdae CL09T00C40 0.39 HMPREF1078_RS07615 recombination mediator RecR 0.61 HMPREF1078_RS00095 recombinase RecA low > 61
Bacteroides stercoris CC31F 0.39 HMPREF1181_RS16455 recombination protein RecR 0.61 HMPREF1181_RS11910 recombinase RecA low > 56
Pseudomonas fluorescens SBW25 0.39 PFLU_RS22415 recombination protein RecR 0.67 PFLU_RS05885 recombinase RecA low > 109
Phocaeicola dorei CL03T12C01 0.39 ABI39_RS14870 recombination protein RecR 0.61 ABI39_RS11930 recombinase RecA low > 72
Shewanella loihica PV-4 0.39 Shew_2233 recombination protein RecR (RefSeq) 0.64 Shew_1215 recA recombinase A (RefSeq) low > 60
Phocaeicola vulgatus CL09T03C04 0.39 HMPREF1058_RS18560 recombination protein RecR 0.61 HMPREF1058_RS15965 recombinase RecA low > 67
Pontibacter actiniarum KMM 6156, DSM 19842 0.38 CA264_01105 recombination protein RecR 0.64 CA264_19695 DNA recombination/repair protein RecA — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_3396 DNA replication and repair protein RecR 0.66 Psyr_1378 RecA protein 0.47 16
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_3396 DNA replication and repair protein RecR 0.66 Psyr_1378 RecA protein 0.35 11
Pseudomonas sp. S08-1 0.38 OH686_02385 recombination protein RecR 0.68 OH686_18205 protein RecA low > 80
Variovorax sp. SCN45 0.38 GFF1110 Recombination protein RecR 0.65 GFF5390 RecA protein low > 127
Synechococcus elongatus PCC 7942 0.38 Synpcc7942_1369 recR recombination protein RecR 0.59 Synpcc7942_0348 recA recombinase A — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.38 ABZR88_RS10695 recombination mediator RecR 0.62 ABZR88_RS16740 recombinase RecA low > 71
Pseudomonas putida KT2440 0.38 PP_4267 Recombination protein RecR 0.67 PP_1629 Protein RecA low > 96
Alteromonas macleodii MIT1002 0.38 MIT1002_02649 Recombination protein RecR 0.68 MIT1002_00955 Recombinase A low > 70
Shewanella amazonensis SB2B 0.38 Sama_1312 recR recombination protein RecR (RefSeq) 0.64 Sama_1046 recA recombinase A (RefSeq) 0.58 9
Variovorax sp. OAS795 0.38 ABID97_RS14700 recombination mediator RecR 0.65 ABID97_RS02275 recombinase RecA 0.38 16
Desulfovibrio vulgaris Miyazaki F 0.38 DvMF_2271 recombination protein RecR (RefSeq) 0.60 DvMF_0876 recA recombinase A (RefSeq) 0.36 7
Hydrogenophaga sp. GW460-11-11-14-LB1 0.38 GFF4253 Recombination protein RecR 0.63 GFF2500 RecA protein 0.90 1
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS10810 recombination mediator RecR 0.65 ABZR87_RS07965 recombinase RecA 0.32 22
Shewanella sp. ANA-3 0.38 Shewana3_2444 recR recombination protein RecR (RefSeq) 0.65 Shewana3_1126 recA recombinase A (RefSeq) 0.80 2
Paraburkholderia graminis OAS925 0.37 ABIE53_002048 recombination protein RecR 0.69 ABIE53_003448 recombination protein RecA 0.55 5
Shewanella oneidensis MR-1 0.37 SO2015 recR recombination protein RecR (NCBI ptt file) 0.65 SO3430 recA recA protein (NCBI ptt file) 0.64 6
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_00834 DNA replication and repair protein RecR 0.69 H281DRAFT_04208 RecA protein low > 103
Pectobacterium carotovorum WPP14 0.37 HER17_RS15695 recombination mediator RecR 0.65 HER17_RS05045 recombinase RecA 0.76 2
Lysobacter sp. OAE881 0.37 ABIE51_RS14010 recombination mediator RecR 0.66 ABIE51_RS07800 recombinase RecA low > 62
Burkholderia phytofirmans PsJN 0.37 BPHYT_RS09070 recombination protein RecR 0.69 BPHYT_RS16360 recombinase RecA — —
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS22285 recombination mediator RecR 0.69 QEN71_RS02335 recombinase RecA — —
Rahnella sp. WP5 0.36 EX31_RS22525 recombination protein RecR 0.65 EX31_RS07800 recombinase RecA low > 89
Dyella japonica UNC79MFTsu3.2 0.36 ABZR86_RS06235 recombination mediator RecR 0.65 ABZR86_RS00660 recombinase RecA 0.56 14
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_03202 Recombination protein RecR 0.65 OHPLBJKB_01035 Protein RecA low > 73
Escherichia coli ECRC99 0.36 KEDOAH_19810 recR recombination mediator RecR 0.65 KEDOAH_07430 recA recombinase RecA — —
Escherichia coli BL21 0.36 ECD_00423 gap repair protein 0.65 ECD_02549 DNA recombination and repair protein; ssDNA-dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP-dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor low > 60
Escherichia coli ECRC101 0.36 MCAODC_27380 recR recombination mediator RecR 0.65 MCAODC_11230 recA recombinase RecA — —
Escherichia coli BW25113 0.36 b0472 recR recombination protein RecR (NCBI) 0.65 b2699 recA recombinase A (NCBI) low > 76
Escherichia coli ECOR27 0.36 NOLOHH_01085 recR recombination mediator RecR 0.65 NOLOHH_12545 recA recombinase RecA — —
Rhodanobacter sp. FW510-T8 0.36 OKGIIK_05655 recR recombination mediator RecR 0.68 OKGIIK_03740 recA recombinase RecA low > 52
Escherichia coli ECRC62 0.36 BNILDI_22505 recR recombination mediator RecR 0.65 BNILDI_11105 recA recombinase RecA — —
Escherichia coli ECOR38 0.36 HEPCGN_06770 recR recombination mediator RecR 0.65 HEPCGN_19900 recA recombinase RecA low > 85
Escherichia coli ECRC102 0.36 NIAGMN_06210 recR recombination mediator RecR 0.65 NIAGMN_18475 recA recombinase RecA — —
Escherichia coli ECRC98 0.36 JDDGAC_11805 recR recombination mediator RecR 0.65 JDDGAC_24370 recA recombinase RecA — —
Escherichia fergusonii Becca 0.36 EFB2_03586 Recombination protein RecR 0.65 EFB2_01225 Protein RecA low > 86
Escherichia coli Nissle 1917 0.36 ECOLIN_RS02805 recombination mediator RecR 0.65 ECOLIN_RS15060 recombinase RecA — —
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS13270 recombination protein RecR 0.64 RR42_RS03080 recombinase RecA 0.58 11
Dickeya dadantii 3937 0.36 DDA3937_RS05790 recombination protein RecR 0.65 DDA3937_RS16245 recombinase RecA low > 74
Escherichia coli ECRC101 0.36 OKFHMN_08155 recR recombination mediator RecR 0.65 OKFHMN_20705 recA recombinase RecA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF4390 Recombination protein RecR 0.65 GFF4693 RecA protein — —
Klebsiella michiganensis M5al 0.36 BWI76_RS06830 recombination protein RecR 0.65 BWI76_RS22180 recombinase RecA — —
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS15170 recombination protein RecR 0.64 RALBFv3_RS12010 recombinase RecA low > 76
Ralstonia solanacearum UW163 0.36 UW163_RS12640 recombination protein RecR 0.64 UW163_RS01625 recombinase RecA — —
Rhodanobacter denitrificans MT42 0.36 LRK55_RS01020 recombination mediator RecR 0.68 LRK55_RS14695 recombinase RecA low > 63
Desulfovibrio vulgaris Hildenborough JW710 0.35 DVU3200 recR recombination protein RecR (TIGR) 0.61 DVU1090 recA recA protein (TIGR) low > 55
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS01250 recombination mediator RecR 0.68 LRK54_RS14980 recombinase RecA 0.33 5
Ralstonia solanacearum PSI07 0.35 RPSI07_RS18205 recombination protein RecR 0.64 RPSI07_RS21260 recombinase RecA low > 81
Enterobacter sp. TBS_079 0.35 MPMX20_01074 Recombination protein RecR 0.64 MPMX20_03580 Protein RecA low > 85
Ralstonia solanacearum GMI1000 0.35 RS_RS05980 recombination protein RecR 0.64 RS_RS02760 DNA recombination/repair protein RecA — —
Enterobacter asburiae PDN3 0.35 EX28DRAFT_2485 DNA replication and repair protein RecR 0.65 EX28DRAFT_2785 protein RecA — —
Dickeya dianthicola 67-19 0.35 HGI48_RS05840 recombination protein RecR 0.64 HGI48_RS16355 recombinase RecA — —
Dickeya dianthicola ME23 0.35 DZA65_RS06165 recombination protein RecR 0.65 DZA65_RS17450 recombinase RecA — —
Serratia liquefaciens MT49 0.35 IAI46_05240 recombination protein RecR 0.64 IAI46_03840 recombinase RecA 0.62 13
Castellaniella sp019104865 MT123 0.35 ABCV34_RS15480 recombination mediator RecR 0.69 ABCV34_RS04460 recombinase RecA low > 48
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_05375 recombination protein RecR 0.64 CSW01_02875 DNA recombination/repair protein RecA 0.50 10
Erwinia tracheiphila SCR3 0.35 LU632_RS18105 recR recombination mediator RecR 0.65 LU632_RS15735 recA recombinase RecA low > 74
Acidovorax sp. GW101-3H11 0.34 Ac3H11_473 Recombination protein RecR 0.65 Ac3H11_1255 RecA protein — —
Pantoea sp. MT58 0.34 IAI47_14465 recombination protein RecR 0.64 IAI47_04300 recombinase RecA 0.27 62
Xanthomonas campestris pv. campestris strain 8004 0.34 Xcc-8004.4012.1 Recombination protein RecR 0.67 Xcc-8004.3111.1 RecA protein — —

Not shown: 1 genomes with orthologs for CCNA_00270 only; 1 genomes with orthologs for CCNA_01141 only