Conservation of cofitness between BPHYT_RS06610 and BPHYT_RS06405 in Burkholderia phytofirmans PsJN

98 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS06610 triosephosphate isomerase 1.0 BPHYT_RS06405 phosphoribosylamine--glycine ligase 0.83 1
Paraburkholderia graminis OAS925 0.88 ABIE53_001588 triosephosphate isomerase 0.98 ABIE53_001545 phosphoribosylamine--glycine ligase — —
Paraburkholderia bryophila 376MFSha3.1 0.87 H281DRAFT_04564 triosephosphate isomerase 0.98 H281DRAFT_04521 phosphoribosylamine--glycine ligase — —
Paraburkholderia sabiae LMG 24235 0.80 QEN71_RS24165 triose-phosphate isomerase 0.92 QEN71_RS24400 phosphoribosylamine--glycine ligase low > 153
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS05495 triosephosphate isomerase 0.74 RR42_RS04730 phosphoribosylamine--glycine ligase — —
Ralstonia sp. UNC404CL21Col 0.60 ABZR87_RS14895 triose-phosphate isomerase 0.78 ABZR87_RS15410 phosphoribosylamine--glycine ligase — —
Ralstonia solanacearum GMI1000 0.59 RS_RS10360 triose-phosphate isomerase 0.78 RS_RS10995 phosphoribosylamine--glycine ligase — —
Ralstonia solanacearum PSI07 0.59 RPSI07_RS14320 triose-phosphate isomerase 0.77 RPSI07_RS13680 phosphoribosylamine--glycine ligase — —
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS02990 triose-phosphate isomerase 0.76 RALBFv3_RS03545 phosphoribosylamine--glycine ligase — —
Ralstonia solanacearum UW163 0.59 UW163_RS10735 triose-phosphate isomerase 0.76 UW163_RS10125 phosphoribosylamine--glycine ligase — —
Acidovorax sp. GW101-3H11 0.51 Ac3H11_1454 Triosephosphate isomerase (EC 5.3.1.1) 0.68 Ac3H11_2421 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) — —
Castellaniella sp019104865 MT123 0.51 ABCV34_RS01320 triose-phosphate isomerase 0.68 ABCV34_RS02550 phosphoribosylamine--glycine ligase — —
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.1979.1 Triosephosphate isomerase (EC 5.3.1.1) 0.58 Xcc-8004.657.1 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) — —
Variovorax sp. SCN45 0.49 GFF4748 Triosephosphate isomerase (EC 5.3.1.1) 0.72 GFF302 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) low > 127
Dechlorosoma suillum PS 0.49 Dsui_3052 triosephosphate isomerase 0.73 Dsui_1596 phosphoribosylamine--glycine ligase — —
Kangiella aquimarina DSM 16071 0.48 B158DRAFT_0649 triosephosphate isomerase (EC 5.3.1.1) 0.59 B158DRAFT_0167 phosphoribosylamine--glycine ligase (EC 6.3.4.13) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF3679 Triosephosphate isomerase (EC 5.3.1.1) 0.66 GFF4524 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) — —
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS01940 triose-phosphate isomerase 0.52 ABZR86_RS13850 phosphoribosylamine--glycine ligase — —
Rhodanobacter sp. FW510-T8 0.46 OKGIIK_07435 tpiA triose-phosphate isomerase 0.51 OKGIIK_13750 purD phosphoribosylamine--glycine ligase — —
Alteromonas macleodii MIT1002 0.46 MIT1002_01868 Triosephosphate isomerase 0.56 MIT1002_03961 Phosphoribosylamine--glycine ligase — —
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS17500 triose-phosphate isomerase 0.51 LRK54_RS10165 phosphoribosylamine--glycine ligase — —
Rahnella sp. WP5 0.46 EX31_RS14300 triose-phosphate isomerase 0.57 EX31_RS16855 phosphoribosylamine--glycine ligase — —
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS08805 triosephosphate isomerase 0.80 HSERO_RS17755 phosphoribosylamine--glycine ligase — —
Dickeya dianthicola 67-19 0.45 HGI48_RS20510 triose-phosphate isomerase 0.57 HGI48_RS01210 phosphoribosylamine--glycine ligase — —
Dickeya dianthicola ME23 0.45 DZA65_RS21555 triose-phosphate isomerase 0.57 DZA65_RS01255 phosphoribosylamine--glycine ligase — —
Variovorax sp. OAS795 0.45 ABID97_RS20510 triose-phosphate isomerase 0.70 ABID97_RS16735 phosphoribosylamine--glycine ligase — —
Rhodanobacter denitrificans MT42 0.45 LRK55_RS17720 triose-phosphate isomerase 0.51 LRK55_RS09805 phosphoribosylamine--glycine ligase — —
Dickeya dadantii 3937 0.45 DDA3937_RS00865 triose-phosphate isomerase 0.58 DDA3937_RS01215 phosphoribosylamine--glycine ligase low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.44 Echvi_1196 triosephosphate isomerase 0.41 Echvi_0167 phosphoribosylamine--glycine ligase — —
Bacteroides ovatus ATCC 8483 0.44 BACOVA_01155 triose-phosphate isomerase 0.41 BACOVA_01348 phosphoribosylamine--glycine ligase — —
Bacteroides thetaiotaomicron VPI-5482 0.44 BT3929 triosephosphate isomerase (NCBI ptt file) 0.40 BT3253 phosphoribosylamine--glycine ligase (NCBI ptt file) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.44 ABZR88_RS14455 triose-phosphate isomerase 0.39 ABZR88_RS01620 phosphoribosylamine--glycine ligase — —
Pectobacterium carotovorum WPP14 0.44 HER17_RS00800 triose-phosphate isomerase 0.57 HER17_RS20340 phosphoribosylamine--glycine ligase — —
Marinobacter adhaerens HP15 0.43 HP15_3071 triosephosphate isomerase 0.58 HP15_3228 phosphoribosylamine-glycine ligase — —
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_05590 triosephosphate isomerase 0.58 AO353_13645 phosphoribosylamine--glycine ligase — —
Bacteroides stercoris CC31F 0.43 HMPREF1181_RS06595 triose-phosphate isomerase 0.42 HMPREF1181_RS01580 phosphoribosylamine--glycine ligase — —
Phocaeicola vulgatus CL09T03C04 0.43 HMPREF1058_RS08270 triose-phosphate isomerase 0.41 HMPREF1058_RS10995 phosphoribosylamine--glycine ligase — —
Erwinia tracheiphila SCR3 0.43 LU632_RS19730 tpiA triose-phosphate isomerase 0.58 LU632_RS01015 purD phosphoribosylamine--glycine ligase — —
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_1164 Triosephosphate isomerase (EC 5.3.1.1) 0.59 Pf1N1B4_1316 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) — —
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_4184 triosephosphate isomerase 0.58 Psyr_4407 phosphoribosylamine--glycine ligase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_4184 triosephosphate isomerase 0.58 Psyr_4407 phosphoribosylamine--glycine ligase — —
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_3356 Triosephosphate isomerase (EC 5.3.1.1) 0.59 Pf6N2E2_3520 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.42 CA264_14890 triose-phosphate isomerase 0.40 CA264_20115 phosphoribosylamine--glycine ligase low > 74
Pantoea sp. MT58 0.42 IAI47_00795 triose-phosphate isomerase 0.59 IAI47_18045 phosphoribosylamine--glycine ligase — —
Pedobacter sp. GW460-11-11-14-LB5 0.42 CA265_RS10795 triose-phosphate isomerase 0.37 CA265_RS22605 phosphoribosylamine--glycine ligase — —
Pseudomonas fluorescens FW300-N2C3 0.42 AO356_07440 triosephosphate isomerase 0.58 AO356_08230 phosphoribosylamine--glycine ligase — —
Parabacteroides merdae CL09T00C40 0.42 HMPREF1078_RS12745 triose-phosphate isomerase 0.40 HMPREF1078_RS06805 phosphoribosylamine--glycine ligase — —
Pseudomonas sp. RS175 0.42 PFR28_00085 Triosephosphate isomerase 0.59 PFR28_05213 Phosphoribosylamine--glycine ligase — —
Serratia liquefaciens MT49 0.42 IAI46_24635 triose-phosphate isomerase 0.56 IAI46_01360 phosphoribosylamine--glycine ligase — —
Enterobacter sp. TBS_079 0.42 MPMX20_04548 Triosephosphate isomerase 0.58 MPMX20_00225 Phosphoribosylamine--glycine ligase — —
Pseudomonas putida KT2440 0.42 PP_4715 triose phosphate isomerase 0.59 PP_4823 Phosphoribosylamine--glycine ligase — —
Enterobacter asburiae PDN3 0.42 EX28DRAFT_4394 triosephosphate isomerase (EC 5.3.1.1) 0.58 EX28DRAFT_4544 phosphoribosylamine--glycine ligase (EC 6.3.4.13) — —
Escherichia fergusonii Becca 0.41 EFB2_04699 Triosephosphate isomerase 0.60 EFB2_04605 Phosphoribosylamine--glycine ligase — —
Escherichia coli ECRC101 0.41 MCAODC_04310 tpiA triose-phosphate isomerase 0.59 MCAODC_03815 purD Phosphoribosylamine--glycine ligase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF2302 Triosephosphate isomerase (EC 5.3.1.1) 0.59 GFF4187 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) — —
Escherichia coli BL21 0.41 ECD_03804 triosephosphate isomerase 0.60 ECD_03882 phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase — —
Escherichia coli ECOR27 0.41 NOLOHH_05945 tpiA triose-phosphate isomerase 0.59 NOLOHH_05460 purD Phosphoribosylamine--glycine ligase — —
Escherichia coli ECRC100 0.41 OKFHMN_13810 tpiA triose-phosphate isomerase 0.59 OKFHMN_13315 purD Phosphoribosylamine--glycine ligase — —
Escherichia coli ECRC98 0.41 JDDGAC_17435 tpiA triose-phosphate isomerase 0.59 JDDGAC_16940 purD Phosphoribosylamine--glycine ligase — —
Escherichia coli BW25113 0.41 b3919 tpiA triosephosphate isomerase (NCBI) 0.59 b4005 purD phosphoribosylamine--glycine ligase (NCBI) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_04132 Triosephosphate isomerase 0.60 OHPLBJKB_04044 Phosphoribosylamine--glycine ligase — —
Escherichia coli ECRC99 0.41 KEDOAH_14350 tpiA triose-phosphate isomerase 0.59 KEDOAH_14845 purD Phosphoribosylamine--glycine ligase — —
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_5091 Triosephosphate isomerase (EC 5.3.1.1) 0.58 PfGW456L13_58 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) — —
Escherichia coli Nissle 1917 0.41 ECOLIN_RS22575 triose-phosphate isomerase 0.60 ECOLIN_RS23095 phosphoribosylamine--glycine ligase low > 55
Escherichia coli ECRC62 0.41 BNILDI_05585 tpiA triose-phosphate isomerase 0.59 BNILDI_06060 purD Phosphoribosylamine--glycine ligase — —
Escherichia coli ECRC102 0.41 NIAGMN_11565 tpiA triose-phosphate isomerase 0.59 NIAGMN_11065 purD Phosphoribosylamine--glycine ligase — —
Escherichia coli ECOR38 0.41 HEPCGN_12455 tpiA triose-phosphate isomerase 0.59 HEPCGN_11955 purD Phosphoribosylamine--glycine ligase — —
Shewanella oneidensis MR-1 0.41 SO1200 tpiA triosephosphate isomerase (NCBI ptt file) 0.54 SO0441 purD phosphoribosylamine--glycine ligase (NCBI ptt file) — —
Shewanella sp. ANA-3 0.41 Shewana3_1026 triosephosphate isomerase (RefSeq) 0.55 Shewana3_0440 phosphoribosylamine--glycine ligase (RefSeq) — —
Pseudomonas sp. S08-1 0.41 OH686_17115 triose-phosphate isomerase 0.58 OH686_07625 Phosphoribosylamine--glycine ligase — —
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS25840 triose-phosphate isomerase 0.58 PFLU_RS03010 phosphoribosylamine--glycine ligase — —
Pseudomonas fluorescens SBW25 0.41 PFLU_RS25840 triose-phosphate isomerase 0.58 PFLU_RS03010 phosphoribosylamine--glycine ligase — —
Pseudomonas simiae WCS417 0.41 PS417_24000 triosephosphate isomerase 0.57 PS417_02935 phosphoribosylamine--glycine ligase — —
Shewanella amazonensis SB2B 0.40 Sama_0957 Triose-phosphate isomerase (RefSeq) 0.56 Sama_0394 phosphoribosylamine--glycine ligase (RefSeq) — —
Lysobacter sp. OAE881 0.40 ABIE51_RS08295 triose-phosphate isomerase 0.57 ABIE51_RS17770 phosphoribosylamine--glycine ligase — —
Fusobacterium nucleatum SB010 0.40 HUW76_08545 triose-phosphate isomerase 0.40 HUW76_05205 phosphoribosylamine--glycine ligase — —
Klebsiella michiganensis M5al 0.40 BWI76_RS27465 triose-phosphate isomerase 0.59 BWI76_RS01610 phosphoribosylamine--glycine ligase — —
Shewanella loihica PV-4 0.40 Shew_2831 Triose-phosphate isomerase (RefSeq) 0.53 Shew_3413 phosphoribosylamine--glycine ligase (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_13490 triose-phosphate isomerase 0.58 CSW01_01415 phosphoribosylamine--glycine ligase — —
Pseudomonas stutzeri RCH2 0.38 Psest_0975 triosephosphate isomerase 0.58 Psest_1013 phosphoribosylamine--glycine ligase — —
Sinorhizobium meliloti 1021 0.37 SMc01023 triosephosphate isomerase 0.45 SMc00993 phosphoribosylamine--glycine ligase low > 103
Synechococcus elongatus PCC 7942 0.37 Synpcc7942_1261 tpiA triosephosphate isomerase 0.41 Synpcc7942_0925 purD phosphoribosylamine--glycine ligase — —
Magnetospirillum magneticum AMB-1 0.37 AMB_RS09205 triose-phosphate isomerase 0.44 AMB_RS01075 phosphoribosylamine--glycine ligase — —
Rhodopseudomonas palustris CGA009 0.37 TX73_014970 triose-phosphate isomerase 0.46 TX73_005965 phosphoribosylamine--glycine ligase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.37 A4249_RS06145 triose-phosphate isomerase 0.40 A4249_RS09255 phosphoribosylamine--glycine ligase — —
Phaeobacter inhibens DSM 17395 0.37 PGA1_c20650 triosephosphate isomerase TpiA 0.43 PGA1_c23610 phosphoribosylamine--glycine ligase PurD — —
Azospirillum sp. SherDot2 0.35 MPMX19_01241 Triosephosphate isomerase 0.47 MPMX19_01630 Phosphoribosylamine--glycine ligase — —
Rhizobium sp. OAE497 0.35 ABIE40_RS09645 triose-phosphate isomerase 0.47 ABIE40_RS05430 phosphoribosylamine--glycine ligase low > 107
Rhodospirillum rubrum S1H 0.35 Rru_A1889 Triosephosphate isomerase (NCBI) 0.43 Rru_A0646 Phosphoribosylamine--glycine ligase (NCBI) — —
Agrobacterium fabrum C58 0.35 Atu1620 triosephosphate isomerase 0.48 Atu0647 phosphoribosylamine--glycine ligase 0.67 30
Bifidobacterium breve UCC2003 0.34 BBR_RS15540 triose-phosphate isomerase 0.41 BBR_RS13370 phosphoribosylamine--glycine ligase — —
Desulfovibrio vulgaris Hildenborough JW710 0.34 DVU1677 tpiA triosephosphate isomerase (TIGR) 0.44 DVU0488 purD phosphoribosylamine--glycine ligase (TIGR) — —
Caulobacter crescentus NA1000 0.33 CCNA_01970 triosephosphate isomerase 0.42 CCNA_00299 phosphoribosylamine--glycine ligase — —
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_01970 triosephosphate isomerase 0.42 CCNA_00299 phosphoribosylamine--glycine ligase — —
Mycobacterium tuberculosis H37Rv 0.33 Rv1438 Probable triosephosphate isomerase Tpi (TIM) 0.32 Rv0772 Probable phosphoribosylamine--glycine ligase PurD (GARS) (glycinamide ribonucleotide synthetase) (phosphoribosylglycinamide synthetase) (5'-phosphoribosylglycinamide synthetase) — —
Dinoroseobacter shibae DFL-12 0.33 Dshi_2078 Triose-phosphate isomerase (RefSeq) 0.42 Dshi_2728 phosphoribosylamine--glycine ligase (RefSeq) — —
Acinetobacter radioresistens SK82 0.32 MPMX26_00247 Triosephosphate isomerase 0.58 MPMX26_01140 Phosphoribosylamine--glycine ligase — —
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_0254 triosephosphate isomerase (EC 5.3.1.1) 0.40 Ga0059261_1441 phosphoribosylamine--glycine ligase (EC 6.3.4.13) — —
Desulfovibrio vulgaris Miyazaki F 0.30 DvMF_0348 Triose-phosphate isomerase (RefSeq) 0.44 DvMF_1722 phosphoribosylamine--glycine ligase (RefSeq) — —

Not shown: 0 genomes with orthologs for BPHYT_RS06610 only; 5 genomes with orthologs for BPHYT_RS06405 only