| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Agrobacterium fabrum C58 | 1.0 | Atu3727 | | hypothetical protein | 1.0 | Atu4617 | | dTDP-D-glucose-4,6-dehydratase | 0.48 | 17 |
| Sinorhizobium meliloti 1021 | 0.92 | SMc03969 | | hypothetical protein | 0.57 | SM_b21326 | | dTDP-D-glucose 4,6-dehydratase | low | > 103 |
| Rhizobium sp. OAE497 | 0.87 | ABIE40_RS15665 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.79 | ABIE40_RS08670 | | dTDP-glucose 4,6-dehydratase | low | > 107 |
| Bosea sp. OAE506 | 0.75 | ABIE41_RS09460 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.65 | ABIE41_RS02850 | | dTDP-glucose 4,6-dehydratase | low | > 77 |
| Phaeobacter inhibens DSM 17395 | 0.67 | PGA1_c21770 | | DNA-binding regulatory protein, YebC/PmpR family | 0.59 | PGA1_65p00240 | | dTDP-glucose 4,6-dehydratase RffG | — | — |
| Rhodopseudomonas palustris CGA009 | 0.67 | TX73_005640 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.18 | TX73_020345 | | GDP-mannose 4,6-dehydratase | low | > 86 |
| Sphingomonas koreensis DSMZ 15582 | 0.65 | Ga0059261_0824 | | DNA-binding regulatory protein, YebC/PmpR family | 0.56 | Ga0059261_3099 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | — | — |
| Dinoroseobacter shibae DFL-12 | 0.64 | Dshi_2762 | | protein of unknown function DUF28 (RefSeq) | 0.61 | Dshi_4115 | | dTDP-glucose 4,6-dehydratase (RefSeq) | low | > 64 |
| Azospirillum brasilense Sp245 | 0.61 | AZOBR_RS09035 | | transcriptional regulator | 0.60 | AZOBR_RS33415 | | dTDP-glucose 4 6-dehydratase | low | > 97 |
| Azospirillum sp. SherDot2 | 0.61 | MPMX19_00695 | | putative transcriptional regulatory protein | 0.66 | MPMX19_06725 | | dTDP-glucose 4,6-dehydratase 2 | — | — |
| Rhodospirillum rubrum S1H | 0.60 | Rru_A1086 | | hypothetical protein (RefSeq) | 0.67 | Rru_B0050 | | dTDP-glucose 4,6-dehydratase (NCBI) | low | > 58 |
| Caulobacter crescentus NA1000 Δfur | 0.59 | CCNA_03352 | | YebC/PmpR transcriptional regulator | 0.67 | CCNA_03744 | | dTDP-glucose 4,6-dehydratase | low | > 67 |
| Caulobacter crescentus NA1000 | 0.59 | CCNA_03352 | | YebC/PmpR transcriptional regulator | 0.67 | CCNA_03744 | | dTDP-glucose 4,6-dehydratase | low | > 66 |
| Magnetospirillum magneticum AMB-1 | 0.58 | AMB_RS16265 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.58 | AMB_RS00295 | | dTDP-glucose 4,6-dehydratase | — | — |
| Fusobacterium nucleatum SB010 | 0.47 | HUW76_01460 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.43 | HUW76_01440 | | dTDP-glucose 4,6-dehydratase | — | — |
| Pseudomonas sp. S08-1 | 0.46 | OH686_19120 | | Probable transcriptional regulatory protein YebC | 0.65 | OH686_14380 | | dTDP-glucose 4,6-dehydratase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.46 | Psyr_1407 | | Protein of unknown function DUF28 | 0.65 | Psyr_4935 | | dTDP-glucose 4,6-dehydratase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.46 | Psyr_1407 | | Protein of unknown function DUF28 | 0.65 | Psyr_4935 | | dTDP-glucose 4,6-dehydratase | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.46 | PfGW456L13_1850 | | FIG000859: hypothetical protein YebC | 0.61 | PfGW456L13_2200 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | — | — |
| Pseudomonas stutzeri RCH2 | 0.45 | Psest_1494 | | DNA-binding regulatory protein, YebC/PmpR family | 0.67 | Psest_4262 | | dTDP-glucose 4,6-dehydratase | — | — |
| Shewanella loihica PV-4 | 0.45 | Shew_2078 | | hypothetical protein (RefSeq) | 0.66 | Shew_1401 | | dTDP-glucose 4,6 dehydratase (RefSeq) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.45 | AO356_18010 | | hypothetical protein | 0.67 | AO356_10040 | | dTDP-glucose 4,6-dehydratase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.45 | Pf6N2E2_5534 | | FIG000859: hypothetical protein YebC | 0.66 | Pf6N2E2_3878 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.45 | DVU2259 | | conserved hypothetical protein TIGR01033 (TIGR) | 0.41 | DVU1364 | rfbB | dTDP-glucose 4,6-dehydratase (TIGR) | — | — |
| Pseudomonas sp. RS175 | 0.44 | PFR28_03415 | | Transcriptional regulatory protein PmpR | 0.65 | PFR28_04894 | | dTDP-glucose 4,6-dehydratase 2 | — | — |
| Serratia liquefaciens MT49 | 0.44 | IAI46_14635 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.67 | IAI46_00610 | | dTDP-glucose 4,6-dehydratase | low | > 86 |
| Pseudomonas putida KT2440 | 0.44 | PP_1214 | | putative transcriptional regulatory protein | 0.58 | PP_1785 | | dTDP-glucose 4,6-dehydratase 2 | — | — |
| Escherichia coli ECRC62 | 0.44 | BNILDI_15490 | | putative transcriptional regulatory protein YebC | 0.65 | BNILDI_04830 | rffG | dTDP-glucose 4,6-dehydratase | — | — |
| Escherichia coli ECRC102 | 0.44 | NIAGMN_01805 | | putative transcriptional regulatory protein YebC | 0.65 | NIAGMN_12315 | rffG | dTDP-glucose 4,6-dehydratase | — | — |
| Escherichia fergusonii Becca | 0.44 | EFB2_02078 | | putative transcriptional regulatory protein YebC | 0.65 | EFB2_04851 | | dTDP-glucose 4,6-dehydratase 2 | low | > 86 |
| Escherichia coli ECRC99 | 0.44 | KEDOAH_01850 | | putative transcriptional regulatory protein YebC | 0.65 | KEDOAH_13590 | rffG | dTDP-glucose 4,6-dehydratase | — | — |
| Escherichia coli ECOR27 | 0.44 | NOLOHH_16700 | | putative transcriptional regulatory protein YebC | 0.65 | NOLOHH_06695 | rffG | dTDP-glucose 4,6-dehydratase | — | — |
| Escherichia coli ECOR38 | 0.44 | HEPCGN_04665 | | putative transcriptional regulatory protein YebC | 0.65 | HEPCGN_13270 | rffG | dTDP-glucose 4,6-dehydratase | low | > 85 |
| Escherichia coli Nissle 1917 | 0.44 | ECOLIN_RS10380 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.65 | ECOLIN_RS21745 | | dTDP-glucose 4,6-dehydratase | — | — |
| Escherichia coli ECRC101 | 0.44 | MCAODC_19150 | | putative transcriptional regulatory protein YebC | 0.65 | MCAODC_05065 | rffG | dTDP-glucose 4,6-dehydratase | — | — |
| Escherichia coli ECRC101 | 0.44 | OKFHMN_26255 | | putative transcriptional regulatory protein YebC | 0.65 | OKFHMN_14560 | rffG | dTDP-glucose 4,6-dehydratase | — | — |
| Escherichia coli BL21 | 0.44 | ECD_01835 | | UPF0082 family protein | 0.65 | ECD_03666 | | dTDP-glucose 4,6-dehydratase | low | > 60 |
| Escherichia coli ECRC98 | 0.44 | JDDGAC_00830 | | putative transcriptional regulatory protein YebC | 0.65 | JDDGAC_18185 | rffG | dTDP-glucose 4,6-dehydratase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.44 | OHPLBJKB_01864 | | putative transcriptional regulatory protein YebC | 0.65 | OHPLBJKB_04266 | | dTDP-glucose 4,6-dehydratase 2 | low | > 73 |
| Acinetobacter radioresistens SK82 | 0.44 | MPMX26_01851 | | putative transcriptional regulatory protein YebC | 0.61 | MPMX26_00450 | | dTDP-glucose 4,6-dehydratase 2 | low | > 36 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.44 | GFF1645 | | FIG000859: hypothetical protein YebC | 0.66 | GFF2885 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | low | > 78 |
| Dickeya dadantii 3937 | 0.44 | DDA3937_RS10065 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.68 | DDA3937_RS06735 | | dTDP-glucose 4,6-dehydratase | low | > 74 |
| Desulfovibrio vulgaris Miyazaki F | 0.44 | DvMF_3201 | | hypothetical protein (RefSeq) | 0.43 | DvMF_0141 | | dTDP-glucose 4,6-dehydratase (RefSeq) | — | — |
| Dickeya dianthicola ME23 | 0.44 | DZA65_RS10510 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.68 | DZA65_RS07110 | | dTDP-glucose 4,6-dehydratase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.44 | HGI48_RS10095 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.68 | HGI48_RS06755 | | dTDP-glucose 4,6-dehydratase | low | > 71 |
| Escherichia coli BW25113 | 0.44 | b1864 | yebC | hypothetical protein (NCBI) | 0.65 | b3788 | rffG | dTDP-glucose 4,6-dehydratase (NCBI) | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.43 | HER17_RS11855 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.67 | HER17_RS01165 | | dTDP-glucose 4,6-dehydratase | — | — |
| Enterobacter asburiae PDN3 | 0.43 | EX28DRAFT_0693 | | DNA-binding regulatory protein, YebC/PmpR family | 0.62 | EX28DRAFT_0515 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.43 | Pf1N1B4_640 | | FIG000859: hypothetical protein YebC | 0.67 | Pf1N1B4_5939 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | — | — |
| Klebsiella michiganensis M5al | 0.43 | BWI76_RS18160 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.61 | BWI76_RS19065 | | dTDP-glucose 4,6-dehydratase | — | — |
| Dechlorosoma suillum PS | 0.43 | Dsui_0489 | | DNA-binding regulatory protein, YebC/PmpR family | 0.55 | Dsui_1948 | | dTDP-glucose 4,6-dehydratase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.42 | AO353_03595 | | hypothetical protein | 0.67 | AO353_11885 | | dTDP-glucose 4,6-dehydratase | — | — |
| Shewanella oneidensis MR-1 | 0.42 | SO2432 | | conserved hypothetical protein TIGR01033 (NCBI ptt file) | 0.65 | SO3188 | rfbB | dTDP-glucose 4,6-dehydratase (NCBI ptt file) | low | > 76 |
| Pseudomonas simiae WCS417 | 0.42 | PS417_22460 | | hypothetical protein | 0.67 | PS417_01330 | | dTDP-glucose 4,6-dehydratase | — | — |
| Rahnella sp. WP5 | 0.42 | EX31_RS11685 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.67 | EX31_RS11515 | | dTDP-glucose 4,6-dehydratase | — | — |
| Pantoea sp. MT58 | 0.42 | IAI47_08435 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.64 | IAI47_18500 | | dTDP-glucose 4,6-dehydratase | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.42 | CA264_01650 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.52 | CA264_17910 | | dTDP-glucose 4,6-dehydratase | — | — |
| Enterobacter sp. TBS_079 | 0.42 | MPMX20_02769 | | putative transcriptional regulatory protein YebC | 0.63 | MPMX20_03013 | | dTDP-glucose 4,6-dehydratase | 0.49 | 2 |
| Pseudomonas fluorescens SBW25 | 0.41 | PFLU_RS24100 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.66 | PFLU_RS01425 | | dTDP-glucose 4,6-dehydratase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.41 | PFLU_RS24100 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.66 | PFLU_RS01425 | | dTDP-glucose 4,6-dehydratase | — | — |
| Erwinia tracheiphila SCR3 | 0.41 | LU632_RS13425 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.63 | LU632_RS08850 | rfbB | dTDP-glucose 4,6-dehydratase | low | > 74 |
| Shewanella sp. ANA-3 | 0.41 | Shewana3_1954 | | hypothetical protein (RefSeq) | 0.66 | Shewana3_1379 | | dTDP-glucose 4,6 dehydratase (RefSeq) | — | — |
| Shewanella amazonensis SB2B | 0.41 | Sama_1842 | | hypothetical protein (RefSeq) | 0.57 | Sama_2242 | | dTDP-glucose 4,6-dehydratase (RefSeq) | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.41 | RR42_RS04735 | | hypothetical protein | 0.57 | RR42_RS15840 | | spore coat protein | — | — |
| Marinobacter adhaerens HP15 | 0.41 | HP15_2043 | | protein YebC | 0.66 | HP15_p187g47 | | dTDP-glucose 4,6-dehydratase | low | > 73 |
| Castellaniella sp019104865 MT123 | 0.41 | ABCV34_RS02555 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.65 | ABCV34_RS02410 | | dTDP-glucose 4,6-dehydratase | — | — |
| Paraburkholderia graminis OAS925 | 0.40 | ABIE53_001546 | | YebC/PmpR family DNA-binding regulatory protein | 0.59 | ABIE53_001137 | | dTDP-glucose 4,6-dehydratase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.40 | H281DRAFT_04522 | | DNA-binding regulatory protein, YebC/PmpR family | 0.59 | H281DRAFT_04822 | | dTDP-glucose 4,6-dehydratase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.40 | HSERO_RS17750 | | transcriptional regulator | 0.53 | HSERO_RS22050 | | spore coat protein | — | — |
| Burkholderia phytofirmans PsJN | 0.40 | BPHYT_RS06410 | | transcriptional regulator | 0.59 | BPHYT_RS04265 | | dTDP-glucose 4,6-dehydratase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.40 | ABZR87_RS15405 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.59 | ABZR87_RS08645 | | dTDP-glucose 4,6-dehydratase | low | > 80 |
| Mycobacterium tuberculosis H37Rv | 0.40 | Rv2603c | | Highly conserved protein | 0.38 | Rv3464 | | dTDP-glucose 4,6-dehydratase RmlB | — | — |
| Ralstonia solanacearum GMI1000 | 0.39 | RS_RS10990 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.59 | RS_RS03430 | | dTDP-glucose 4,6-dehydratase | — | — |
| Bifidobacterium breve UCC2003 | 0.39 | BBR_RS15645 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.40 | BBR_RS19790 | | dTDP-glucose 4,6-dehydratase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.39 | QEN71_RS24395 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.58 | QEN71_RS25755 | | dTDP-glucose 4,6-dehydratase | — | — |
| Ralstonia solanacearum PSI07 | 0.39 | RPSI07_RS13685 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.60 | RPSI07_RS20615 | | dTDP-glucose 4,6-dehydratase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.39 | RALBFv3_RS03540 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.60 | RALBFv3_RS12645 | | dTDP-glucose 4,6-dehydratase | — | — |
| Ralstonia solanacearum UW163 | 0.39 | UW163_RS10130 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.60 | UW163_RS00920 | | dTDP-glucose 4,6-dehydratase | — | — |
| Synechococcus elongatus PCC 7942 | 0.38 | Synpcc7942_1017 | | hypothetical protein | 0.62 | Synpcc7942_2100 | rfbB | dTDP-glucose 4,6-dehydratase | low | > 38 |
| Variovorax sp. OAS795 | 0.38 | ABID97_RS16740 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.57 | ABID97_RS05660 | | dTDP-glucose 4,6-dehydratase | — | — |
| Variovorax sp. SCN45 | 0.38 | GFF303 | | Probable transcriptional regulatory protein YebC | 0.57 | GFF6882 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | — | — |
| Rhodanobacter denitrificans MT42 | 0.37 | LRK55_RS04700 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.55 | LRK55_RS05420 | | dTDP-glucose 4,6-dehydratase | low | > 63 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.37 | GFF4523 | | FIG000859: hypothetical protein YebC | 0.56 | GFF1837 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.37 | LRK54_RS04920 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.55 | LRK54_RS05665 | | dTDP-glucose 4,6-dehydratase | low | > 59 |
| Acidovorax sp. GW101-3H11 | 0.37 | Ac3H11_2422 | | FIG000859: hypothetical protein | 0.55 | Ac3H11_1880 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | — | — |
| Lysobacter sp. OAE881 | 0.37 | ABIE51_RS05035 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.52 | ABIE51_RS15620 | | dTDP-glucose 4,6-dehydratase | low | > 62 |
| Rhodanobacter sp. FW510-T8 | 0.36 | OKGIIK_01830 | tACO1 | YebC/PmpR family DNA-binding transcriptional regulator | 0.55 | OKGIIK_01175 | rfbB | dTDP-glucose 4,6-dehydratase | low | > 52 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.36 | ABZR88_RS22270 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.54 | ABZR88_RS17425 | | dTDP-glucose 4,6-dehydratase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.34 | Xcc-8004.1434.1 | | FIG000859: hypothetical protein YebC | 0.56 | Xcc-8004.4486.1 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | low | > 74 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.33 | CA265_RS15330 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.52 | CA265_RS19340 | | dTDP-glucose 4,6-dehydratase | — | — |
| Parabacteroides merdae CL09T00C40 | 0.32 | HMPREF1078_RS09835 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.48 | HMPREF1078_RS00705 | | dTDP-glucose 4,6-dehydratase | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.31 | Echvi_1239 | | DNA-binding regulatory protein, YebC/PmpR family | 0.51 | Echvi_2329 | | dTDP-glucose 4,6-dehydratase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.30 | ABZR86_RS10850 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.56 | ABZR86_RS18735 | | dTDP-glucose 4,6-dehydratase | — | — |
| Phocaeicola dorei CL03T12C01 | 0.30 | ABI39_RS17640 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.53 | ABI39_RS13370 | | dTDP-glucose 4,6-dehydratase | low | > 72 |
| Phocaeicola vulgatus CL09T03C04 | 0.30 | HMPREF1058_RS03510 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.47 | HMPREF1058_RS02350 | | dTDP-glucose 4,6-dehydratase | — | — |
| Bacteroides ovatus ATCC 8483 | 0.29 | BACOVA_02249 | | DNA-binding regulatory protein, YebC/PmpR family | 0.49 | BACOVA_03743 | | dTDP-glucose 4,6-dehydratase | low | > 94 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.29 | BT0627 | | conserved hypothetical protein, with a conserved domain of unknown function (NCBI ptt file) | 0.49 | BT0466 | | dTDP-glucose 4,6-dehydratase (NCBI ptt file) | — | — |
| Alteromonas macleodii MIT1002 | 0.29 | MIT1002_00845 | | putative transcriptional regulatory protein YeeN | 0.64 | MIT1002_03557 | | dTDP-glucose 4,6-dehydratase | — | — |
| Bacteroides stercoris CC31F | 0.27 | HMPREF1181_RS16620 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.46 | HMPREF1181_RS08020 | | dTDP-glucose 4,6-dehydratase | — | — |
Not shown: 3 genomes with orthologs for Atu3727 only; 0 genomes with orthologs for Atu4617 only