Conservation of cofitness between Atu2650 and Atu0647 in Agrobacterium fabrum C58

99 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu2650 glycerol-3-phosphate dehydrogenase 1.0 Atu0647 phosphoribosylamine--glycine ligase 0.86 14
Rhizobium sp. OAE497 0.72 ABIE40_RS18055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.81 ABIE40_RS05430 phosphoribosylamine--glycine ligase 0.74 25
Sinorhizobium meliloti 1021 0.64 SMc03229 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.76 SMc00993 phosphoribosylamine--glycine ligase 0.79 8
Brevundimonas sp. GW460-12-10-14-LB2 0.40 A4249_RS15450 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.48 A4249_RS09255 phosphoribosylamine--glycine ligase — —
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_0712 Glycerol-3-phosphate dehydrogenase 0.55 B158DRAFT_0167 phosphoribosylamine--glycine ligase (EC 6.3.4.13) — —
Pantoea sp. MT58 0.38 IAI47_00740 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.55 IAI47_18045 phosphoribosylamine--glycine ligase — —
Serratia liquefaciens MT49 0.38 IAI46_24690 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.56 IAI46_01360 phosphoribosylamine--glycine ligase low > 86
Rhodospirillum rubrum S1H 0.38 Rru_A3571 Glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI) 0.55 Rru_A0646 Phosphoribosylamine--glycine ligase (NCBI) — —
Dinoroseobacter shibae DFL-12 0.38 Dshi_3414 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein (RefSeq) 0.55 Dshi_2728 phosphoribosylamine--glycine ligase (RefSeq) 0.77 6
Phaeobacter inhibens DSM 17395 0.38 PGA1_c35480 glycerol-3-phosphate dehydrogenase GpsA 0.57 PGA1_c23610 phosphoribosylamine--glycine ligase PurD 0.84 30
Rahnella sp. WP5 0.38 EX31_RS14340 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.55 EX31_RS16855 phosphoribosylamine--glycine ligase 0.72 46
Erwinia tracheiphila SCR3 0.38 LU632_RS21875 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.55 LU632_RS01015 purD phosphoribosylamine--glycine ligase 0.75 8
Dickeya dadantii 3937 0.37 DDA3937_RS20405 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.55 DDA3937_RS01215 phosphoribosylamine--glycine ligase — —
Azospirillum sp. SherDot2 0.37 MPMX19_02123 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.60 MPMX19_01630 Phosphoribosylamine--glycine ligase 0.66 33
Dickeya dianthicola ME23 0.37 DZA65_RS00850 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.54 DZA65_RS01255 phosphoribosylamine--glycine ligase — —
Pectobacterium carotovorum WPP14 0.37 HER17_RS20735 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.56 HER17_RS20340 phosphoribosylamine--glycine ligase low > 75
Dickeya dianthicola 67-19 0.37 HGI48_RS00795 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.55 HGI48_RS01210 phosphoribosylamine--glycine ligase low > 71
Caulobacter crescentus NA1000 0.37 CCNA_00068 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.50 CCNA_00299 phosphoribosylamine--glycine ligase — —
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_00068 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.50 CCNA_00299 phosphoribosylamine--glycine ligase — —
Escherichia coli ECRC98 0.36 JDDGAC_19380 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.57 JDDGAC_16940 purD Phosphoribosylamine--glycine ligase — —
Escherichia coli ECOR38 0.36 HEPCGN_14595 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.57 HEPCGN_11955 purD Phosphoribosylamine--glycine ligase — —
Escherichia coli ECRC101 0.36 OKFHMN_15755 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.57 OKFHMN_13315 purD Phosphoribosylamine--glycine ligase — —
Escherichia coli ECOR27 0.36 NOLOHH_07635 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.56 NOLOHH_05460 purD Phosphoribosylamine--glycine ligase — —
Escherichia fergusonii Becca 0.36 EFB2_00202 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.56 EFB2_04605 Phosphoribosylamine--glycine ligase — —
Escherichia coli BL21 0.36 ECD_03466 glycerol-3-phosphate dehydrogenase (NAD+) 0.57 ECD_03882 phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase — —
Escherichia coli ECRC99 0.36 KEDOAH_12395 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.57 KEDOAH_14845 purD Phosphoribosylamine--glycine ligase — —
Escherichia coli ECRC62 0.36 BNILDI_03880 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.57 BNILDI_06060 purD Phosphoribosylamine--glycine ligase — —
Escherichia coli ECRC101 0.36 MCAODC_06265 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.57 MCAODC_03815 purD Phosphoribosylamine--glycine ligase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_00091 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.56 OHPLBJKB_04044 Phosphoribosylamine--glycine ligase — —
Escherichia coli ECRC102 0.36 NIAGMN_13515 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.57 NIAGMN_11065 purD Phosphoribosylamine--glycine ligase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF402 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.56 GFF4187 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) — —
Escherichia coli Nissle 1917 0.36 ECOLIN_RS20595 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.56 ECOLIN_RS23095 phosphoribosylamine--glycine ligase — —
Escherichia coli BW25113 0.36 b3608 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (NCBI) 0.56 b4005 purD phosphoribosylamine--glycine ligase (NCBI) — —
Klebsiella michiganensis M5al 0.36 BWI76_RS27210 glycerol-3-phosphate dehydrogenase 0.56 BWI76_RS01610 phosphoribosylamine--glycine ligase — —
Enterobacter asburiae PDN3 0.36 EX28DRAFT_3859 Glycerol-3-phosphate dehydrogenase 0.56 EX28DRAFT_4544 phosphoribosylamine--glycine ligase (EC 6.3.4.13) — —
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_13405 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 0.59 CSW01_01415 phosphoribosylamine--glycine ligase — —
Enterobacter sp. TBS_079 0.36 MPMX20_00125 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.56 MPMX20_00225 Phosphoribosylamine--glycine ligase — —
Azospirillum brasilense Sp245 0.36 AZOBR_RS00325 glycerol-3-phosphate dehydrogenase 0.61 AZOBR_RS04470 phosphoribosylamine--glycine ligase — —
Shewanella amazonensis SB2B 0.36 Sama_0063 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.52 Sama_0394 phosphoribosylamine--glycine ligase (RefSeq) — —
Shewanella loihica PV-4 0.36 Shew_3803 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.52 Shew_3413 phosphoribosylamine--glycine ligase (RefSeq) — —
Lysobacter sp. OAE881 0.35 ABIE51_RS00495 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.49 ABIE51_RS17770 phosphoribosylamine--glycine ligase — —
Alteromonas macleodii MIT1002 0.35 MIT1002_00485 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.55 MIT1002_03961 Phosphoribosylamine--glycine ligase low > 70
Rhodanobacter sp. FW510-T8 0.35 OKGIIK_13015 gpsA glycerol-3-phosphate dehydrogenase 0.47 OKGIIK_13750 purD phosphoribosylamine--glycine ligase — —
Shewanella sp. ANA-3 0.35 Shewana3_0054 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.51 Shewana3_0440 phosphoribosylamine--glycine ligase (RefSeq) — —
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.271.1 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.53 Xcc-8004.657.1 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.71 2
Sphingomonas koreensis DSMZ 15582 0.35 Ga0059261_2234 Glycerol-3-phosphate dehydrogenase 0.55 Ga0059261_1441 phosphoribosylamine--glycine ligase (EC 6.3.4.13) — —
Shewanella oneidensis MR-1 0.35 SO0053 gpsA glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI ptt file) 0.51 SO0441 purD phosphoribosylamine--glycine ligase (NCBI ptt file) — —
Bosea sp. OAE506 0.35 ABIE41_RS05655 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.62 ABIE41_RS23160 phosphoribosylamine--glycine ligase 0.60 17
Fusobacterium nucleatum SB010 0.34 HUW76_05650 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.38 HUW76_05205 phosphoribosylamine--glycine ligase — —
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS13250 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.49 ABZR86_RS13850 phosphoribosylamine--glycine ligase — —
Rhodopseudomonas palustris CGA009 0.34 TX73_001320 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.64 TX73_005965 phosphoribosylamine--glycine ligase — —
Rhodanobacter denitrificans MT42 0.33 LRK55_RS10550 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.47 LRK55_RS09805 phosphoribosylamine--glycine ligase — —
Rhodanobacter denitrificans FW104-10B01 0.33 LRK54_RS10860 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.47 LRK54_RS10165 phosphoribosylamine--glycine ligase — —
Desulfovibrio vulgaris Hildenborough JW710 0.33 DVU3159 gpsA glycerol-3-phosphate dehydrogenase (NAD(P)+) (TIGR) 0.48 DVU0488 purD phosphoribosylamine--glycine ligase (TIGR) low > 55
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_02000 glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.49 H281DRAFT_04521 phosphoribosylamine--glycine ligase — —
Herbaspirillum seropedicae SmR1 0.32 HSERO_RS00795 glycerol-3-phosphate dehydrogenase 0.51 HSERO_RS17755 phosphoribosylamine--glycine ligase — —
Castellaniella sp019104865 MT123 0.31 ABCV34_RS14250 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.52 ABCV34_RS02550 phosphoribosylamine--glycine ligase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF1222 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.48 GFF4524 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) — —
Marinobacter adhaerens HP15 0.31 HP15_1762 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.55 HP15_3228 phosphoribosylamine-glycine ligase — —
Acidovorax sp. GW101-3H11 0.30 Ac3H11_3860 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.48 Ac3H11_2421 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) — —
Pseudomonas stutzeri RCH2 0.30 Psest_2471 Glycerol-3-phosphate dehydrogenase 0.52 Psest_1013 phosphoribosylamine--glycine ligase — —
Ralstonia solanacearum GMI1000 0.30 RS_RS01760 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 0.49 RS_RS10995 phosphoribosylamine--glycine ligase — —
Paraburkholderia graminis OAS925 0.29 ABIE53_000667 glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.49 ABIE53_001545 phosphoribosylamine--glycine ligase — —
Variovorax sp. OAS795 0.29 ABID97_RS07405 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.49 ABID97_RS16735 phosphoribosylamine--glycine ligase — —
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_5875 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.54 Pf6N2E2_3520 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) — —
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_19795 glycerol-3-phosphate dehydrogenase 0.54 AO356_08230 phosphoribosylamine--glycine ligase — —
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS10920 glycerol-3-phosphate dehydrogenase 0.49 RALBFv3_RS03545 phosphoribosylamine--glycine ligase — —
Ralstonia solanacearum UW163 0.29 UW163_RS02660 glycerol-3-phosphate dehydrogenase 0.49 UW163_RS10125 phosphoribosylamine--glycine ligase — —
Pseudomonas sp. RS175 0.29 PFR28_03076 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.54 PFR28_05213 Phosphoribosylamine--glycine ligase — —
Variovorax sp. SCN45 0.29 GFF2573 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.49 GFF302 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) low > 127
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_01735 glycerol-3-phosphate dehydrogenase 0.54 AO353_13645 phosphoribosylamine--glycine ligase — —
Mycobacterium tuberculosis H37Rv 0.28 Rv2982c Probable glycerol-3-phosphate dehydrogenase [NAD(P)+] GpdA2 (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) 0.36 Rv0772 Probable phosphoribosylamine--glycine ligase PurD (GARS) (glycinamide ribonucleotide synthetase) (phosphoribosylglycinamide synthetase) (5'-phosphoribosylglycinamide synthetase) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_2022 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.53 Psyr_4407 phosphoribosylamine--glycine ligase — —
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_2022 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.53 Psyr_4407 phosphoribosylamine--glycine ligase — —
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS09055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.53 PFLU_RS03010 phosphoribosylamine--glycine ligase — —
Pseudomonas fluorescens SBW25 0.28 PFLU_RS09055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.53 PFLU_RS03010 phosphoribosylamine--glycine ligase — —
Pseudomonas simiae WCS417 0.28 PS417_09000 glycerol-3-phosphate dehydrogenase 0.51 PS417_02935 phosphoribosylamine--glycine ligase — —
Ralstonia sp. UNC404CL21Col 0.28 ABZR87_RS06770 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.49 ABZR87_RS15410 phosphoribosylamine--glycine ligase — —
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_2046 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.53 PfGW456L13_58 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) — —
Burkholderia phytofirmans PsJN 0.28 BPHYT_RS02610 glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.49 BPHYT_RS06405 phosphoribosylamine--glycine ligase 0.71 42
Pseudomonas putida KT2440 0.28 PP_4169 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.54 PP_4823 Phosphoribosylamine--glycine ligase — —
Ralstonia solanacearum PSI07 0.28 RPSI07_RS22390 glycerol-3-phosphate dehydrogenase 0.50 RPSI07_RS13680 phosphoribosylamine--glycine ligase — —
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS01465 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.49 QEN71_RS24400 phosphoribosylamine--glycine ligase 0.66 64
Dechlorosoma suillum PS 0.27 Dsui_1277 glycerol-3-phosphate dehydrogenase 0.52 Dsui_1596 phosphoribosylamine--glycine ligase — —
Pseudomonas sp. S08-1 0.26 OH686_00475 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.53 OH686_07625 Phosphoribosylamine--glycine ligase — —
Acinetobacter radioresistens SK82 0.26 MPMX26_01116 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.52 MPMX26_01140 Phosphoribosylamine--glycine ligase — —
Cupriavidus basilensis FW507-4G11 0.26 RR42_RS01845 glycerol-3-phosphate dehydrogenase 0.47 RR42_RS04730 phosphoribosylamine--glycine ligase — —
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_3518 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.54 Pf1N1B4_1316 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) — —
Bifidobacterium breve UCC2003 0.25 BBR_RS12080 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.45 BBR_RS13370 phosphoribosylamine--glycine ligase — —
Synechococcus elongatus PCC 7942 0.25 Synpcc7942_2522 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.42 Synpcc7942_0925 purD phosphoribosylamine--glycine ligase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.23 Echvi_0322 Glycerol-3-phosphate dehydrogenase 0.40 Echvi_0167 phosphoribosylamine--glycine ligase — —
Bacteroides stercoris CC31F 0.19 HMPREF1181_RS08570 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.42 HMPREF1181_RS01580 phosphoribosylamine--glycine ligase — —
Bacteroides ovatus ATCC 8483 0.19 BACOVA_03234 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminal domain protein 0.41 BACOVA_01348 phosphoribosylamine--glycine ligase — —
Bacteroides thetaiotaomicron VPI-5482 0.19 BT2123 glycerol-3-phosphate dehydrogenase (NCBI ptt file) 0.42 BT3253 phosphoribosylamine--glycine ligase (NCBI ptt file) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.18 CA264_05630 glycerol-3-phosphate dehydrogenase 0.42 CA264_20115 phosphoribosylamine--glycine ligase low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.18 ABZR88_RS01515 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.38 ABZR88_RS01620 phosphoribosylamine--glycine ligase — —
Phocaeicola dorei CL03T12C01 0.17 ABI39_RS21145 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.42 ABI39_RS06055 phosphoribosylamine--glycine ligase — —
Pedobacter sp. GW460-11-11-14-LB5 0.17 CA265_RS16375 glycerol-3-phosphate dehydrogenase 0.38 CA265_RS22605 phosphoribosylamine--glycine ligase — —
Phocaeicola vulgatus CL09T03C04 0.17 HMPREF1058_RS07270 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.43 HMPREF1058_RS10995 phosphoribosylamine--glycine ligase — —
Parabacteroides merdae CL09T00C40 0.17 HMPREF1078_RS10070 glycerol-3-phosphate dehydrogenase 0.42 HMPREF1078_RS06805 phosphoribosylamine--glycine ligase — —

Not shown: 0 genomes with orthologs for Atu2650 only; 4 genomes with orthologs for Atu0647 only