Conservation of cofitness between AO356_14785 and AO356_07510 in Pseudomonas fluorescens FW300-N2C3

98 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2C3 1.0 AO356_14785 ABC-ATPase UvrA 1.0 AO356_07510 DNA repair protein RecN 0.78 4
Pseudomonas fluorescens FW300-N2E2 1.00 Pf6N2E2_4888 Excinuclease ABC subunit A 0.98 Pf6N2E2_3370 DNA repair protein RecN 0.73 4
Pseudomonas sp. RS175 0.99 PFR28_03974 UvrABC system protein A 0.94 PFR28_00071 DNA repair protein RecN low > 88
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_2611 Excinuclease ABC subunit A 0.94 Pf1N1B4_1178 DNA repair protein RecN 0.56 5
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_1283 Excinuclease ABC subunit A 0.94 PfGW456L13_5106 DNA repair protein RecN 0.32 35
Pseudomonas fluorescens FW300-N2E3 0.97 AO353_06855 ABC-ATPase UvrA 0.92 AO353_05660 DNA repair protein RecN 0.67 4
Pseudomonas simiae WCS417 0.97 PS417_25395 excinuclease ABC subunit A 0.91 PS417_24070 recombination and repair protein 0.66 2
Pseudomonas fluorescens SBW25-INTG 0.97 PFLU_RS27025 excinuclease ABC subunit UvrA 0.91 PFLU_RS25910 DNA repair protein RecN low > 109
Pseudomonas fluorescens SBW25 0.97 PFLU_RS27025 excinuclease ABC subunit UvrA 0.91 PFLU_RS25910 DNA repair protein RecN low > 109
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_4520 Excinuclease ABC subunit A 0.86 Psyr_4197 DNA replication and repair protein RecN 0.50 8
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_4520 Excinuclease ABC subunit A 0.86 Psyr_4197 DNA replication and repair protein RecN 0.46 17
Pseudomonas putida KT2440 0.93 PP_0483 excinuclease (uvrABC system protein A) 0.83 PP_4729 factor used in recombination and DNA repair — —
Pseudomonas sp. S08-1 0.92 OH686_15495 excinuclease ABC subunit A 0.83 OH686_17050 DNA repair protein RecN low > 80
Pseudomonas stutzeri RCH2 0.90 Psest_3576 excinuclease ABC, A subunit 0.80 Psest_0962 DNA repair protein RecN 0.74 5
Escherichia coli Nissle 1917 0.77 ECOLIN_RS23485 excinuclease ABC subunit UvrA 0.39 ECOLIN_RS14775 DNA repair protein RecN low > 55
Rahnella sp. WP5 0.77 EX31_RS11990 excinuclease ABC subunit UvrA 0.42 EX31_RS21760 DNA repair protein RecN low > 89
Escherichia coli ECOR38 0.77 HEPCGN_11510 uvrA excinuclease ABC subunit UvrA 0.40 HEPCGN_20265 recN DNA repair protein RecN low > 87
Escherichia coli ECRC101 0.77 MCAODC_03405 uvrA excinuclease ABC subunit UvrA 0.40 MCAODC_11670 recN DNA repair protein RecN low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF1429 Excinuclease ABC subunit A 0.40 GFF4162 DNA repair protein RecN 0.62 14
Escherichia coli ECRC102 0.77 NIAGMN_10740 uvrA excinuclease ABC subunit UvrA 0.40 NIAGMN_18915 recN DNA repair protein RecN — —
Escherichia coli ECRC99 0.77 KEDOAH_15255 uvrA excinuclease ABC subunit UvrA 0.40 KEDOAH_07075 recN DNA repair protein RecN — —
Escherichia coli ECRC98 0.77 JDDGAC_16530 uvrA excinuclease ABC subunit UvrA 0.40 JDDGAC_24810 recN DNA repair protein RecN low > 86
Escherichia fergusonii Becca 0.77 EFB2_04533 UvrABC system protein A 0.40 EFB2_01277 DNA repair protein RecN low > 86
Escherichia coli ECOR27 0.77 NOLOHH_05145 uvrA excinuclease ABC subunit UvrA 0.40 NOLOHH_12815 recN DNA repair protein RecN low > 75
Escherichia coli BW25113 0.77 b4058 uvrA excinuclease ABC subunit A (NCBI) 0.40 b2616 recN recombination and repair protein (NCBI) 0.39 16
Escherichia coli ECRC62 0.77 BNILDI_06380 uvrA excinuclease ABC subunit UvrA 0.40 BNILDI_11620 recN DNA repair protein RecN low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_03983 UvrABC system protein A 0.40 OHPLBJKB_01091 DNA repair protein RecN low > 73
Escherichia coli ECRC100 0.77 OKFHMN_12895 uvrA excinuclease ABC subunit UvrA 0.40 OKFHMN_21145 recN DNA repair protein RecN low > 80
Escherichia coli BL21 0.77 ECD_03930 ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC 0.40 ECD_02504 recombination and repair protein low > 61
Dickeya dianthicola 67-19 0.77 HGI48_RS17610 excinuclease ABC subunit UvrA 0.40 HGI48_RS04320 DNA repair protein RecN low > 71
Dickeya dianthicola ME23 0.77 DZA65_RS18735 excinuclease ABC subunit UvrA 0.40 DZA65_RS04235 DNA repair protein RecN low > 75
Klebsiella michiganensis M5al 0.77 BWI76_RS01950 excinuclease ABC subunit A 0.40 BWI76_RS21560 DNA repair protein RecN low > 92
Dickeya dadantii 3937 0.77 DDA3937_RS17605 excinuclease ABC subunit UvrA 0.41 DDA3937_RS04325 DNA repair protein RecN low > 74
Enterobacter sp. TBS_079 0.77 MPMX20_00276 UvrABC system protein A 0.39 MPMX20_03486 DNA repair protein RecN low > 85
Marinobacter adhaerens HP15 0.77 HP15_406 excinuclease ABC, ATPase subunit (A) 0.50 HP15_3084 DNA repair protein RecN 0.92 2
Pectobacterium carotovorum WPP14 0.76 HER17_RS03550 excinuclease ABC subunit UvrA 0.40 HER17_RS17420 DNA repair protein RecN low > 75
Alteromonas macleodii MIT1002 0.76 MIT1002_00179 Excinuclease ABC subunit A 0.38 MIT1002_01443 Recombination protein N low > 70
Kangiella aquimarina DSM 16071 0.76 B158DRAFT_0885 excinuclease ABC, A subunit 0.40 B158DRAFT_0601 DNA replication and repair protein RecN 0.60 14
Enterobacter asburiae PDN3 0.76 EX28DRAFT_4246 excinuclease ABC, A subunit 0.39 EX28DRAFT_2719 DNA repair protein RecN low > 76
Serratia liquefaciens MT49 0.76 IAI46_22905 excinuclease ABC subunit UvrA 0.43 IAI46_19635 DNA repair protein RecN low > 86
Vibrio cholerae E7946 ATCC 55056 0.76 CSW01_02080 UvrABC system protein A 0.42 CSW01_04395 DNA repair protein RecN low > 62
Pantoea sp. MT58 0.76 IAI47_17815 excinuclease ABC subunit UvrA 0.42 IAI47_04810 DNA repair protein RecN low > 76
Shewanella amazonensis SB2B 0.75 Sama_0514 excinuclease ABC, A subunit (RefSeq) 0.45 Sama_1026 recombination and repair protein (RefSeq) 0.66 6
Shewanella oneidensis MR-1 0.75 SO4030 uvrA excinuclease ABC, A subunit (NCBI ptt file) 0.43 SO3462 recN DNA repair protein RecN (NCBI ptt file) 0.44 14
Shewanella sp. ANA-3 0.75 Shewana3_3592 excinuclease ABC subunit A (RefSeq) 0.43 Shewana3_1104 recombination and repair protein (RefSeq) 0.49 15
Erwinia tracheiphila SCR3 0.75 LU632_RS23685 uvrA excinuclease ABC subunit UvrA 0.38 LU632_RS16985 recN DNA repair protein RecN low > 74
Shewanella loihica PV-4 0.74 Shew_0533 excinuclease ABC, A subunit (RefSeq) 0.43 Shew_1196 recombination and repair protein (RefSeq) 0.68 17
Dechlorosoma suillum PS 0.73 Dsui_1622 excinuclease ABC, A subunit 0.35 Dsui_3072 DNA repair protein RecN 0.88 9
Xanthomonas campestris pv. campestris strain 8004 0.72 Xcc-8004.3830.1 Excinuclease ABC subunit A 0.39 Xcc-8004.3431.1 DNA repair protein RecN low > 74
Dyella japonica UNC79MFTsu3.2 0.72 ABZR86_RS00910 excinuclease ABC subunit UvrA 0.37 ABZR86_RS05665 DNA repair protein RecN 0.80 11
Rhodanobacter sp. FW510-T8 0.71 OKGIIK_03980 uvrA excinuclease ABC subunit UvrA 0.37 OKGIIK_07340 recN DNA repair protein RecN low > 52
Rhodanobacter denitrificans MT42 0.71 LRK55_RS14925 excinuclease ABC subunit UvrA 0.37 LRK55_RS17815 DNA repair protein RecN low > 63
Rhodanobacter denitrificans FW104-10B01 0.71 LRK54_RS15210 excinuclease ABC subunit UvrA 0.36 LRK54_RS17960 DNA repair protein RecN 0.44 26
Ralstonia sp. UNC404CL21Col 0.70 ABZR87_RS07120 excinuclease ABC subunit UvrA 0.35 ABZR87_RS01065 DNA repair protein RecN low > 80
Herbaspirillum seropedicae SmR1 0.70 HSERO_RS19810 excinuclease ABC subunit A 0.36 HSERO_RS03060 DNA repair protein low > 78
Ralstonia solanacearum PSI07 0.70 RPSI07_RS22065 excinuclease ABC subunit UvrA 0.34 RPSI07_RS11890 DNA repair protein RecN low > 81
Ralstonia solanacearum GMI1000 0.70 RS_RS02080 excinuclease ABC subunit UvrA 0.35 RS_RS13275 DNA repair protein RecN low > 80
Ralstonia solanacearum UW163 0.70 UW163_RS02345 excinuclease ABC subunit UvrA 0.35 UW163_RS08210 DNA repair protein RecN — —
Ralstonia solanacearum IBSBF1503 0.70 RALBFv3_RS11235 excinuclease ABC subunit UvrA 0.35 RALBFv3_RS05415 DNA repair protein RecN low > 76
Acinetobacter radioresistens SK82 0.69 MPMX26_02892 UvrABC system protein A 0.32 MPMX26_00239 DNA repair protein RecN 0.45 5
Cupriavidus basilensis FW507-4G11 0.69 RR42_RS02145 excinuclease ABC subunit A 0.35 RR42_RS05910 DNA repair protein 0.69 6
Paraburkholderia bryophila 376MFSha3.1 0.69 H281DRAFT_01913 Excinuclease ABC subunit A 0.32 H281DRAFT_04692 DNA replication and repair protein RecN low > 103
Paraburkholderia graminis OAS925 0.69 ABIE53_000732 excinuclease ABC subunit A 0.32 ABIE53_000856 DNA repair protein RecN (Recombination protein N) low > 113
Burkholderia phytofirmans PsJN 0.69 BPHYT_RS02970 excinuclease ABC subunit A 0.32 BPHYT_RS03560 DNA repair protein low > 109
Paraburkholderia sabiae LMG 24235 0.69 QEN71_RS01825 excinuclease ABC subunit UvrA 0.35 QEN71_RS26535 DNA repair protein RecN low > 153
Variovorax sp. SCN45 0.66 GFF4944 Excinuclease ABC subunit A 0.32 GFF2357 DNA repair protein RecN low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF2755 Excinuclease ABC subunit A 0.32 GFF829 DNA repair protein RecN low > 90
Acidovorax sp. GW101-3H11 0.65 Ac3H11_4387 Excinuclease ABC subunit A 0.34 Ac3H11_3460 DNA repair protein RecN low > 79
Rhodospirillum rubrum S1H 0.62 Rru_A1752 Excinuclease ABC, A subunit (NCBI) 0.25 Rru_A0940 DNA repair protein RecN (NCBI) — —
Castellaniella sp019104865 MT123 0.62 ABCV34_RS12715 excinuclease ABC subunit UvrA 0.33 ABCV34_RS07470 DNA repair protein RecN low > 48
Brevundimonas sp. GW460-12-10-14-LB2 0.61 A4249_RS08575 excinuclease ABC subunit UvrA 0.22 A4249_RS02620 DNA repair protein RecN low > 48
Azospirillum sp. SherDot2 0.61 MPMX19_01152 UvrABC system protein A 0.28 MPMX19_01601 DNA repair protein RecN 0.62 18
Rhodopseudomonas palustris CGA009 0.61 TX73_014580 excinuclease ABC subunit UvrA 0.26 TX73_018240 DNA repair protein RecN low > 86
Dinoroseobacter shibae DFL-12 0.61 Dshi_1809 excinuclease ABC, A subunit (RefSeq) 0.24 Dshi_2413 DNA repair protein RecN (RefSeq) 0.46 21
Caulobacter crescentus NA1000 0.60 CCNA_02673 excinuclease ABC subunit A 0.23 CCNA_02062 DNA repair protein recN 0.83 5
Azospirillum brasilense Sp245 0.60 AZOBR_RS15370 excinuclease ABC subunit A 0.28 AZOBR_RS12395 DNA repair protein RecN — —
Caulobacter crescentus NA1000 Δfur 0.60 CCNA_02673 excinuclease ABC subunit A 0.23 CCNA_02062 DNA repair protein recN low > 67
Magnetospirillum magneticum AMB-1 0.60 AMB_RS12410 excinuclease ABC subunit UvrA 0.28 AMB_RS19520 DNA repair protein RecN — —
Sphingomonas koreensis DSMZ 15582 0.60 Ga0059261_0674 excinuclease ABC, A subunit 0.27 Ga0059261_1026 DNA repair protein RecN 0.35 18
Agrobacterium fabrum C58 0.59 Atu1513 ABC excinuclease subunit A 0.30 Atu2083 DNA repair protein RecN 0.36 49
Bosea sp. OAE506 0.59 ABIE41_RS15100 excinuclease ABC subunit UvrA 0.26 ABIE41_RS12645 DNA repair protein RecN 0.61 3
Sinorhizobium meliloti 1021 0.59 SMc01235 excinuclease ABC subunit A 0.29 SMc01877 DNA repair protein 0.66 10
Phaeobacter inhibens DSM 17395 0.58 PGA1_c17370 uvrABC system protein A 0.25 PGA1_c09720 DNA repair protein RecN 0.47 15
Mycobacterium tuberculosis H37Rv 0.55 Rv1638 Probable excinuclease ABC (subunit A-DNA-binding ATPase) UvrA 0.19 Rv1696 Probable DNA repair protein RecN (recombination protein N) low > 58
Bifidobacterium breve UCC2003 0.54 BBR_RS15510 excinuclease ABC subunit UvrA 0.15 BBR_RS14030 DNA repair protein RecN 0.52 11
Fusobacterium nucleatum SB010 0.54 HUW76_06660 excinuclease ABC subunit UvrA 0.25 HUW76_08055 DNA repair protein RecN low > 35
Synechococcus elongatus PCC 7942 0.54 Synpcc7942_0848 uvrA excinuclease ABC subunit A 0.22 Synpcc7942_1779 recN DNA repair protein RecN 0.61 11
Echinicola vietnamensis KMM 6221, DSM 17526 0.51 Echvi_1138 excinuclease ABC, A subunit 0.26 Echvi_2067 DNA repair protein RecN 0.56 17
Bacteroides ovatus ATCC 8483 0.51 BACOVA_03703 excinuclease ABC, A subunit 0.29 BACOVA_00200 DNA repair protein RecN low > 94
Bacteroides thetaiotaomicron VPI-5482 0.50 BT0578 excinuclease ABC subunit A (NCBI ptt file) 0.28 BT1361 DNA repair protein recN (Recombination protein N) (NCBI ptt file) low > 81
Phocaeicola dorei CL03T12C01 0.50 ABI39_RS15330 excinuclease ABC subunit UvrA 0.28 ABI39_RS14500 DNA repair protein RecN low > 72
Parabacteroides merdae CL09T00C40 0.50 HMPREF1078_RS00835 excinuclease ABC subunit UvrA 0.29 HMPREF1078_RS02000 DNA repair protein RecN low > 61
Phocaeicola vulgatus CL09T03C04 0.50 HMPREF1058_RS01735 excinuclease ABC subunit UvrA 0.28 HMPREF1058_RS18225 DNA repair protein RecN 0.65 67
Pontibacter actiniarum KMM 6156, DSM 19842 0.50 CA264_18100 ABC-ATPase UvrA 0.26 CA264_13235 DNA repair protein RecN low > 74
Bacteroides stercoris CC31F 0.49 HMPREF1181_RS15185 excinuclease ABC subunit UvrA 0.29 HMPREF1181_RS10900 DNA repair protein RecN low > 56
Pedobacter sp. GW460-11-11-14-LB5 0.48 CA265_RS25080 excinuclease ABC subunit A 0.27 CA265_RS14855 DNA repair protein RecN 0.80 10
Mucilaginibacter yixingensis YX-36 DSM 26809 0.48 ABZR88_RS18670 excinuclease ABC subunit UvrA 0.28 ABZR88_RS06580 DNA repair protein RecN low > 71
Desulfovibrio vulgaris Hildenborough JW710 0.47 DVU1987 uvrA excinuclease ABC, A subunit (TIGR) 0.19 DVU2463 recN DNA repair protein RecN (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.46 DvMF_3050 excinuclease ABC, A subunit (RefSeq) 0.08 DvMF_0923 SMC domain protein (RefSeq) 0.28 49

Not shown: 4 genomes with orthologs for AO356_14785 only; 1 genomes with orthologs for AO356_07510 only