Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Bacteroides thetaiotaomicron VPI-5482 | 1.0 | BT1860 | | 3-isopropylmalate dehydratase large subunit (NCBI ptt file) | 1.0 | BT0202 | | histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) | 0.88 | 20 |
Bacteroides ovatus ATCC 8483 | 0.95 | BACOVA_04603 | | 3-isopropylmalate dehydratase, large subunit | 0.92 | BACOVA_01233 | | histidinol-phosphate transaminase | 0.95 | 22 |
Bacteroides stercoris CC31F | 0.89 | HMPREF1181_RS14145 | | 3-isopropylmalate dehydratase large subunit | 0.84 | HMPREF1181_RS04855 | | histidinol-phosphate transaminase | 0.92 | 22 |
Phocaeicola dorei CL03T12C01 | 0.88 | ABI39_RS10200 | | 3-isopropylmalate dehydratase large subunit | 0.78 | ABI39_RS11840 | | histidinol-phosphate transaminase | 0.73 | 57 |
Phocaeicola vulgatus CL09T03C04 | 0.88 | HMPREF1058_RS14550 | | 3-isopropylmalate dehydratase large subunit | 0.78 | HMPREF1058_RS15880 | | histidinol-phosphate transaminase | 0.85 | 15 |
Parabacteroides merdae CL09T00C40 | 0.85 | HMPREF1078_RS16660 | | 3-isopropylmalate dehydratase large subunit | 0.60 | HMPREF1078_RS02445 | | histidinol-phosphate transaminase | 0.95 | 27 |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.68 | Echvi_2059 | | 3-isopropylmalate dehydratase, large subunit | 0.52 | Echvi_2458 | | histidinol-phosphate aminotransferase | 0.68 | 31 |
Pedobacter sp. GW460-11-11-14-LB5 | 0.65 | CA265_RS15830 | | 3-isopropylmalate dehydratase large subunit | 0.55 | CA265_RS03630 | | histidinol-phosphate transaminase | 0.91 | 35 |
Pontibacter actiniarum KMM 6156, DSM 19842 | 0.65 | CA264_09435 | | 3-isopropylmalate dehydratase large subunit | 0.50 | CA264_05035 | | histidinol-phosphate transaminase | low | > 74 |
Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.65 | ABZR88_RS11595 | | 3-isopropylmalate dehydratase large subunit | 0.52 | ABZR88_RS06875 | | histidinol-phosphate transaminase | — | — |
Azospirillum sp. SherDot2 | 0.56 | MPMX19_01998 | | 3-isopropylmalate dehydratase large subunit | 0.18 | MPMX19_04389 | | Histidinol-phosphate aminotransferase | — | — |
Azospirillum brasilense Sp245 | 0.56 | AZOBR_RS03545 | | isopropylmalate isomerase | 0.19 | AZOBR_RS20485 | | histidinol-phosphate aminotransferase [EC:2.6.1.9] (from data) | 0.89 | 11 |
Rhodospirillum rubrum S1H | 0.53 | Rru_A1189 | | 3-isopropylmalate dehydratase large subunit region (NCBI) | 0.18 | Rru_A3264 | | Histidinol-phosphate aminotransferase (NCBI) | 0.88 | 22 |
Rhodopseudomonas palustris CGA009 | 0.53 | TX73_001245 | | 3-isopropylmalate dehydratase large subunit | 0.18 | TX73_023035 | | histidinol-phosphate transaminase | — | — |
Magnetospirillum magneticum AMB-1 | 0.53 | AMB_RS20560 | | 3-isopropylmalate dehydratase large subunit | 0.19 | AMB_RS20110 | | histidinol-phosphate aminotransferase | — | — |
Rahnella sp. WP5 | 0.52 | EX31_RS03690 | | 3-isopropylmalate dehydratase large subunit | 0.27 | EX31_RS11445 | | histidinol-phosphate transaminase | 0.98 | 14 |
Pantoea sp. MT58 | 0.52 | IAI47_16010 | | 3-isopropylmalate dehydratase large subunit | 0.31 | IAI47_07085 | | histidinol-phosphate transaminase | 0.98 | 7 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.52 | Psyr_1983 | | 3-isopropylmalate dehydratase, large subunit | 0.18 | Psyr_4132 | | histidinol phosphate aminotransferase apoenzyme | 0.89 | 18 |
Pseudomonas syringae pv. syringae B728a | 0.52 | Psyr_1983 | | 3-isopropylmalate dehydratase, large subunit | 0.18 | Psyr_4132 | | histidinol phosphate aminotransferase apoenzyme | 0.89 | 15 |
Dickeya dianthicola 67-19 | 0.52 | HGI48_RS18065 | | 3-isopropylmalate dehydratase large subunit | 0.28 | HGI48_RS09740 | | histidinol-phosphate transaminase | low | > 71 |
Dickeya dianthicola ME23 | 0.52 | DZA65_RS19210 | | 3-isopropylmalate dehydratase large subunit | 0.28 | DZA65_RS10050 | | histidinol-phosphate transaminase | low | > 75 |
Sinorhizobium meliloti 1021 | 0.51 | SMc03823 | | isopropylmalate isomerase large subunit | 0.17 | SMa0387 | | histidinol-phosphate aminotransferase | low | > 103 |
Dickeya dadantii 3937 | 0.51 | DDA3937_RS18125 | | 3-isopropylmalate dehydratase large subunit | 0.28 | DDA3937_RS09730 | | histidinol-phosphate transaminase | 0.71 | 32 |
Escherichia fergusonii Becca | 0.51 | EFB2_03973 | | 3-isopropylmalate dehydratase large subunit | 0.27 | EFB2_01835 | | Histidinol-phosphate aminotransferase | low | > 86 |
Kangiella aquimarina DSM 16071 | 0.51 | B158DRAFT_1319 | | 3-isopropylmalate dehydratase, large subunit | 0.19 | B158DRAFT_2325 | | histidinol-phosphate aminotransferase | low | > 40 |
Pectobacterium carotovorum WPP14 | 0.51 | HER17_RS03075 | | 3-isopropylmalate dehydratase large subunit | 0.30 | HER17_RS12235 | | histidinol-phosphate transaminase | 0.97 | 17 |
Paraburkholderia sabiae LMG 24235 | 0.51 | QEN71_RS17605 | | 3-isopropylmalate dehydratase large subunit | 0.24 | QEN71_RS27860 | | histidinol-phosphate transaminase | 0.67 | 61 |
Escherichia coli ECRC62 | 0.51 | BNILDI_08540 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.27 | BNILDI_14735 | hisC | histidinol-phosphate transaminase | — | — |
Escherichia coli BW25113 | 0.51 | b0072 | leuC | isopropylmalate isomerase large subunit (NCBI) | 0.27 | b2021 | hisC | histidinol-phosphate aminotransferase (NCBI) | 0.95 | 12 |
Cupriavidus basilensis FW507-4G11 | 0.51 | RR42_RS14400 | | isopropylmalate isomerase | 0.24 | RR42_RS18910 | | histidinol-phosphate aminotransferase | — | — |
Escherichia coli ECOR38 | 0.51 | HEPCGN_08705 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.27 | HEPCGN_03215 | hisC | histidinol-phosphate transaminase | low | > 85 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.51 | OHPLBJKB_03585 | | 3-isopropylmalate dehydratase large subunit | 0.28 | OHPLBJKB_01679 | | Histidinol-phosphate aminotransferase | low | > 73 |
Escherichia coli Nissle 1917 | 0.51 | ECOLIN_RS00390 | | 3-isopropylmalate dehydratase large subunit | 0.27 | ECOLIN_RS11950 | | histidinol-phosphate transaminase | — | — |
Escherichia coli BL21 | 0.51 | ECD_00074 | | 3-isopropylmalate dehydratase large subunit | 0.27 | ECD_01923 | | histidinol-phosphate aminotransferase | 0.63 | 24 |
Escherichia coli ECOR27 | 0.51 | NOLOHH_03070 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.28 | NOLOHH_15825 | hisC | histidinol-phosphate transaminase | low | > 57 |
Escherichia coli ECRC98 | 0.51 | JDDGAC_14320 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.28 | JDDGAC_28620 | hisC | histidinol-phosphate transaminase | — | — |
Escherichia coli ECRC102 | 0.51 | NIAGMN_08575 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.28 | NIAGMN_22455 | hisC | histidinol-phosphate transaminase | — | — |
Escherichia coli ECRC99 | 0.51 | KEDOAH_17430 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.28 | KEDOAH_03640 | hisC | histidinol-phosphate transaminase | — | — |
Escherichia coli ECRC101 | 0.51 | OKFHMN_10725 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.28 | OKFHMN_24510 | hisC | histidinol-phosphate transaminase | — | — |
Phaeobacter inhibens DSM 17395 | 0.51 | PGA1_c29780 | | 3-isopropylmalate dehydratase large subunit | 0.17 | PGA1_c25240 | | histidinol-phosphate aminotransferase [EC:2.6.1.9] (from data) | — | — |
Escherichia coli ECRC101 | 0.51 | MCAODC_01240 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.28 | MCAODC_20430 | hisC | histidinol-phosphate transaminase | — | — |
Serratia liquefaciens MT49 | 0.51 | IAI46_03345 | | 3-isopropylmalate dehydratase large subunit | 0.27 | IAI46_08205 | | histidinol-phosphate transaminase | low | > 86 |
Ralstonia sp. UNC404CL21Col | 0.51 | ABZR87_RS14540 | | 3-isopropylmalate dehydratase large subunit | 0.21 | ABZR87_RS02495 | | histidinol-phosphate transaminase | low | > 80 |
Paraburkholderia bryophila 376MFSha3.1 | 0.51 | H281DRAFT_06075 | | 3-isopropylmalate dehydratase, large subunit | 0.25 | H281DRAFT_05654 | | histidinol phosphate aminotransferase apoenzyme | low | > 103 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.51 | GFF166 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.28 | GFF3911 | | Histidinol-phosphate aminotransferase (EC 2.6.1.9) | low | > 78 |
Castellaniella sp019104865 MT123 | 0.51 | ABCV34_RS04290 | | 3-isopropylmalate dehydratase large subunit | 0.19 | ABCV34_RS07105 | | histidinol-phosphate transaminase | low | > 48 |
Pseudomonas simiae WCS417 | 0.51 | PS417_18600 | | isopropylmalate isomerase | 0.20 | PS417_08130 | | aspartate aminotransferase | low | > 88 |
Enterobacter asburiae PDN3 | 0.51 | EX28DRAFT_3668 | | 3-isopropylmalate dehydratase, large subunit | 0.29 | EX28DRAFT_0538 | | histidinol-phosphate aminotransferase | 0.92 | 11 |
Shewanella loihica PV-4 | 0.51 | Shew_3470 | | isopropylmalate isomerase large subunit (RefSeq) | 0.24 | Shew_2199 | | histidinol-phosphate aminotransferase (RefSeq) | 0.97 | 30 |
Shewanella oneidensis MR-1 | 0.51 | SO4234 | leuC | 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) | 0.23 | SO2072 | hisC | histidinol-phosphate aminotransferase (NCBI ptt file) | 0.98 | 5 |
Alteromonas macleodii MIT1002 | 0.51 | MIT1002_00947 | | 3-isopropylmalate dehydratase large subunit | 0.27 | MIT1002_02634 | | Histidinol-phosphate aminotransferase | 0.96 | 40 |
Pseudomonas sp. RS175 | 0.50 | PFR28_02824 | | 3-isopropylmalate dehydratase large subunit | 0.21 | PFR28_00908 | | Histidinol-phosphate aminotransferase | low | > 88 |
Ralstonia solanacearum GMI1000 | 0.50 | RS_RS10000 | | 3-isopropylmalate dehydratase large subunit | 0.22 | RS_RS14785 | | histidinol-phosphate aminotransferase 1 | — | — |
Paraburkholderia graminis OAS925 | 0.50 | ABIE53_004801 | | 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit | 0.25 | ABIE53_003700 | | histidinol-phosphate aminotransferase | low | > 113 |
Sphingomonas koreensis DSMZ 15582 | 0.50 | Ga0059261_4223 | | 3-isopropylmalate dehydratase, large subunit | 0.19 | Ga0059261_2299 | | histidinol-phosphate aminotransferase | 0.99 | 11 |
Acidovorax sp. GW101-3H11 | 0.50 | Ac3H11_1525 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.19 | Ac3H11_4729 | | histidinol-phosphate transaminase (EC 2.6.1.9) (from data) | — | — |
Enterobacter sp. TBS_079 | 0.50 | MPMX20_00767 | | 3-isopropylmalate dehydratase large subunit 1 | 0.29 | MPMX20_03003 | | Histidinol-phosphate aminotransferase | 0.93 | 16 |
Pseudomonas fluorescens SBW25-INTG | 0.50 | PFLU_RS20580 | | 3-isopropylmalate dehydratase large subunit | 0.20 | PFLU_RS08100 | | histidinol-phosphate transaminase | low | > 109 |
Ralstonia solanacearum UW163 | 0.50 | UW163_RS11105 | | 3-isopropylmalate dehydratase large subunit | 0.22 | UW163_RS06775 | | histidinol-phosphate transaminase | — | — |
Ralstonia solanacearum IBSBF1503 | 0.50 | RALBFv3_RS02620 | | 3-isopropylmalate dehydratase large subunit | 0.22 | RALBFv3_RS06840 | | histidinol-phosphate transaminase | — | — |
Pseudomonas fluorescens SBW25 | 0.50 | PFLU_RS20580 | | 3-isopropylmalate dehydratase large subunit | 0.20 | PFLU_RS08100 | | histidinol-phosphate transaminase | low | > 109 |
Erwinia tracheiphila SCR3 | 0.50 | LU632_RS02870 | leuC | 3-isopropylmalate dehydratase large subunit | 0.28 | LU632_RS08940 | hisC | histidinol-phosphate transaminase | 0.79 | 25 |
Agrobacterium fabrum C58 | 0.50 | Atu2709 | | 3-isopropylmalate dehydratase, large subunit | 0.15 | Atu3612 | | histidinol-phosphate aminotransferase | — | — |
Burkholderia phytofirmans PsJN | 0.50 | BPHYT_RS33915 | | isopropylmalate isomerase | 0.25 | BPHYT_RS17705 | | histidinol-phosphate aminotransferase | low | > 109 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.50 | GFF3363 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.21 | GFF1313 | | Histidinol-phosphate aminotransferase (EC 2.6.1.9) | low | > 90 |
Pseudomonas fluorescens FW300-N2C3 | 0.50 | AO356_21400 | | isopropylmalate isomerase | 0.20 | AO356_03460 | | aspartate aminotransferase | low | > 104 |
Pseudomonas stutzeri RCH2 | 0.50 | Psest_2591 | | 3-isopropylmalate dehydratase, large subunit | 0.20 | Psest_1985 | | histidinol-phosphate aminotransferase | low | > 67 |
Ralstonia solanacearum PSI07 | 0.50 | RPSI07_RS14695 | | 3-isopropylmalate dehydratase large subunit | 0.22 | RPSI07_RS10395 | | histidinol-phosphate transaminase | — | — |
Lysobacter sp. OAE881 | 0.50 | ABIE51_RS17575 | | 3-isopropylmalate dehydratase large subunit | 0.27 | ABIE51_RS13320 | | histidinol-phosphate transaminase | 0.93 | 29 |
Pseudomonas fluorescens FW300-N1B4 | 0.50 | Pf1N1B4_15 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.21 | Pf1N1B4_349 | | Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) | 0.48 | 77 |
Rhizobium sp. OAE497 | 0.50 | ABIE40_RS18380 | | 3-isopropylmalate dehydratase large subunit | 0.16 | ABIE40_RS17595 | | histidinol-phosphate transaminase | 0.94 | 21 |
Pseudomonas fluorescens FW300-N2E2 | 0.50 | Pf6N2E2_63 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.20 | Pf6N2E2_2519 | | Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) | low | > 103 |
Klebsiella michiganensis M5al | 0.50 | BWI76_RS04670 | | 3-isopropylmalate dehydratase large subunit | 0.28 | BWI76_RS18930 | | histidinol-phosphate transaminase | 0.87 | 35 |
Pseudomonas fluorescens FW300-N2E3 | 0.50 | AO353_20620 | | isopropylmalate isomerase | 0.21 | AO353_02065 | | aspartate aminotransferase | 0.51 | 82 |
Pseudomonas fluorescens GW456-L13 | 0.50 | PfGW456L13_3948 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.20 | PfGW456L13_2177 | | Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) | low | > 87 |
Pseudomonas putida KT2440 | 0.50 | PP_1985 | | 3-isopropylmalate dehydratase large subunit | 0.17 | PP_0967 | | histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) | 0.89 | 8 |
Acinetobacter radioresistens SK82 | 0.50 | MPMX26_00345 | | 3-isopropylmalate dehydratase large subunit | 0.16 | MPMX26_02586 | | Histidinol-phosphate aminotransferase | 0.92 | 18 |
Herbaspirillum seropedicae SmR1 | 0.50 | HSERO_RS16515 | | isopropylmalate isomerase | 0.23 | HSERO_RS20335 | | histidinol-phosphate aminotransferase | low | > 78 |
Shewanella amazonensis SB2B | 0.50 | Sama_0337 | | isopropylmalate isomerase large subunit (RefSeq) | 0.20 | Sama_1943 | | histidinol-phosphate aminotransferase (RefSeq) | 0.95 | 15 |
Pseudomonas sp. S08-1 | 0.50 | OH686_04480 | | 3-isopropylmalate dehydratase large subunit | 0.20 | OH686_20875 | | histidinol-phosphate transaminase | low | > 80 |
Xanthomonas campestris pv. campestris strain 8004 | 0.50 | Xcc-8004.1049.1 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.31 | Xcc-8004.2947.1 | | Histidinol-phosphate aminotransferase (EC 2.6.1.9) | 0.90 | 13 |
Vibrio cholerae E7946 ATCC 55056 | 0.50 | CSW01_12605 | | 3-isopropylmalate dehydratase large subunit | 0.27 | CSW01_05755 | | histidinol-phosphate transaminase | low | > 62 |
Dechlorosoma suillum PS | 0.49 | Dsui_3201 | | 3-isopropylmalate dehydratase, large subunit | 0.16 | Dsui_1414 | | histidinol-phosphate aminotransferase | — | — |
Dinoroseobacter shibae DFL-12 | 0.49 | Dshi_0085 | | 3-isopropylmalate dehydratase, large subunit (RefSeq) | 0.16 | Dshi_2946 | | histidinol-phosphate aminotransferase (RefSeq) | — | — |
Rhodanobacter denitrificans FW104-10B01 | 0.49 | LRK54_RS10335 | | 3-isopropylmalate dehydratase large subunit | 0.32 | LRK54_RS01600 | | histidinol-phosphate transaminase | 0.61 | 53 |
Rhodanobacter denitrificans MT42 | 0.49 | LRK55_RS09975 | | 3-isopropylmalate dehydratase large subunit | 0.32 | LRK55_RS01380 | | histidinol-phosphate transaminase | low | > 63 |
Variovorax sp. SCN45 | 0.49 | GFF3890 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.23 | GFF5348 | | Histidinol-phosphate aminotransferase (EC 2.6.1.9) | low | > 127 |
Variovorax sp. OAS795 | 0.49 | ABID97_RS08465 | | 3-isopropylmalate dehydratase large subunit | 0.23 | ABID97_RS23145 | | histidinol-phosphate transaminase | — | — |
Synechococcus elongatus PCC 7942 | 0.48 | Synpcc7942_1898 | leuC | isopropylmalate isomerase large subunit | 0.19 | Synpcc7942_1030 | hisC | histidinol-phosphate aminotransferase | — | — |
Bifidobacterium breve UCC2003 | 0.48 | BBR_RS19630 | | 3-isopropylmalate dehydratase large subunit | 0.16 | BBR_RS17050 | | histidinol-phosphate transaminase | low | > 34 |
Caulobacter crescentus NA1000 | 0.48 | CCNA_00196 | | 3-isopropylmalate dehydratase large subunit | 0.19 | CCNA_02306 | | histidinol-phosphate aminotransferase | 0.96 | 9 |
Caulobacter crescentus NA1000 Δfur | 0.48 | CCNA_00196 | | 3-isopropylmalate dehydratase large subunit | 0.19 | CCNA_02306 | | histidinol-phosphate aminotransferase | low | > 67 |
Dyella japonica UNC79MFTsu3.2 | 0.48 | ABZR86_RS15960 | | 3-isopropylmalate dehydratase large subunit | 0.30 | ABZR86_RS06725 | | histidinol-phosphate transaminase | 0.95 | 25 |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.47 | A4249_RS10005 | | 3-isopropylmalate dehydratase large subunit | 0.16 | A4249_RS11450 | | histidinol-phosphate transaminase | low | > 48 |
Rhodanobacter sp. FW510-T8 | 0.47 | OKGIIK_13585 | leuC | 3-isopropylmalate dehydratase large subunit | 0.32 | OKGIIK_04955 | hisC | histidinol-phosphate transaminase | low | > 52 |
Methanococcus maripaludis JJ | 0.22 | MMJJ_RS08425 | | 3-isopropylmalate dehydratase large subunit | 0.21 | MMJJ_RS08090 | | histidinol-phosphate transaminase | — | — |
Methanococcus maripaludis S2 | 0.22 | MMP_RS05930 | | 3-isopropylmalate dehydratase large subunit | 0.21 | MMP_RS06260 | | histidinol-phosphate transaminase | — | — |
Desulfovibrio vulgaris Hildenborough JW710 | 0.20 | DVU2982 | leuC | 3-isopropylmalate dehydratase / (R)-citramalate isomerase, large subunit LeuC (EC 4.2.1.33; EC 4.2.1.35) (from data) | 0.25 | DVU1029 | hisC | histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) | 0.83 | 36 |
Desulfovibrio vulgaris Miyazaki F | 0.20 | DvMF_1792 | | 3-isopropylmalate dehydratase large subunit (RefSeq) | 0.23 | DvMF_0908 | | histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) | 0.96 | 8 |
Not shown: 4 genomes with orthologs for BT1860 only; 1 genomes with orthologs for BT0202 only