Conservation of cofitness between BT1860 and BT0202 in Bacteroides thetaiotaomicron VPI-5482

98 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT1860 3-isopropylmalate dehydratase large subunit (NCBI ptt file) 1.0 BT0202 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.88 20
Bacteroides ovatus ATCC 8483 0.95 BACOVA_04603 3-isopropylmalate dehydratase, large subunit 0.92 BACOVA_01233 histidinol-phosphate transaminase 0.95 22
Bacteroides stercoris CC31F 0.89 HMPREF1181_RS14145 3-isopropylmalate dehydratase large subunit 0.84 HMPREF1181_RS04855 histidinol-phosphate transaminase 0.92 22
Phocaeicola dorei CL03T12C01 0.88 ABI39_RS10200 3-isopropylmalate dehydratase large subunit 0.78 ABI39_RS11840 histidinol-phosphate transaminase 0.73 57
Phocaeicola vulgatus CL09T03C04 0.88 HMPREF1058_RS14550 3-isopropylmalate dehydratase large subunit 0.78 HMPREF1058_RS15880 histidinol-phosphate transaminase 0.85 15
Parabacteroides merdae CL09T00C40 0.85 HMPREF1078_RS16660 3-isopropylmalate dehydratase large subunit 0.60 HMPREF1078_RS02445 histidinol-phosphate transaminase 0.95 27
Echinicola vietnamensis KMM 6221, DSM 17526 0.68 Echvi_2059 3-isopropylmalate dehydratase, large subunit 0.52 Echvi_2458 histidinol-phosphate aminotransferase 0.68 31
Pedobacter sp. GW460-11-11-14-LB5 0.65 CA265_RS15830 3-isopropylmalate dehydratase large subunit 0.55 CA265_RS03630 histidinol-phosphate transaminase 0.91 35
Pontibacter actiniarum KMM 6156, DSM 19842 0.65 CA264_09435 3-isopropylmalate dehydratase large subunit 0.50 CA264_05035 histidinol-phosphate transaminase low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.65 ABZR88_RS11595 3-isopropylmalate dehydratase large subunit 0.52 ABZR88_RS06875 histidinol-phosphate transaminase
Azospirillum sp. SherDot2 0.56 MPMX19_01998 3-isopropylmalate dehydratase large subunit 0.18 MPMX19_04389 Histidinol-phosphate aminotransferase
Azospirillum brasilense Sp245 0.56 AZOBR_RS03545 isopropylmalate isomerase 0.19 AZOBR_RS20485 histidinol-phosphate aminotransferase [EC:2.6.1.9] (from data) 0.89 11
Rhodospirillum rubrum S1H 0.53 Rru_A1189 3-isopropylmalate dehydratase large subunit region (NCBI) 0.18 Rru_A3264 Histidinol-phosphate aminotransferase (NCBI) 0.88 22
Rhodopseudomonas palustris CGA009 0.53 TX73_001245 3-isopropylmalate dehydratase large subunit 0.18 TX73_023035 histidinol-phosphate transaminase
Magnetospirillum magneticum AMB-1 0.53 AMB_RS20560 3-isopropylmalate dehydratase large subunit 0.19 AMB_RS20110 histidinol-phosphate aminotransferase
Rahnella sp. WP5 0.52 EX31_RS03690 3-isopropylmalate dehydratase large subunit 0.27 EX31_RS11445 histidinol-phosphate transaminase 0.98 14
Pantoea sp. MT58 0.52 IAI47_16010 3-isopropylmalate dehydratase large subunit 0.31 IAI47_07085 histidinol-phosphate transaminase 0.98 7
Pseudomonas syringae pv. syringae B728a ΔmexB 0.52 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.18 Psyr_4132 histidinol phosphate aminotransferase apoenzyme 0.89 18
Pseudomonas syringae pv. syringae B728a 0.52 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.18 Psyr_4132 histidinol phosphate aminotransferase apoenzyme 0.89 15
Dickeya dianthicola 67-19 0.52 HGI48_RS18065 3-isopropylmalate dehydratase large subunit 0.28 HGI48_RS09740 histidinol-phosphate transaminase low > 71
Dickeya dianthicola ME23 0.52 DZA65_RS19210 3-isopropylmalate dehydratase large subunit 0.28 DZA65_RS10050 histidinol-phosphate transaminase low > 75
Sinorhizobium meliloti 1021 0.51 SMc03823 isopropylmalate isomerase large subunit 0.17 SMa0387 histidinol-phosphate aminotransferase low > 103
Dickeya dadantii 3937 0.51 DDA3937_RS18125 3-isopropylmalate dehydratase large subunit 0.28 DDA3937_RS09730 histidinol-phosphate transaminase 0.71 32
Escherichia fergusonii Becca 0.51 EFB2_03973 3-isopropylmalate dehydratase large subunit 0.27 EFB2_01835 Histidinol-phosphate aminotransferase low > 86
Kangiella aquimarina DSM 16071 0.51 B158DRAFT_1319 3-isopropylmalate dehydratase, large subunit 0.19 B158DRAFT_2325 histidinol-phosphate aminotransferase low > 40
Pectobacterium carotovorum WPP14 0.51 HER17_RS03075 3-isopropylmalate dehydratase large subunit 0.30 HER17_RS12235 histidinol-phosphate transaminase 0.97 17
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS17605 3-isopropylmalate dehydratase large subunit 0.24 QEN71_RS27860 histidinol-phosphate transaminase 0.67 61
Escherichia coli ECRC62 0.51 BNILDI_08540 leuC1 3-isopropylmalate dehydratase large subunit 1 0.27 BNILDI_14735 hisC histidinol-phosphate transaminase
Escherichia coli BW25113 0.51 b0072 leuC isopropylmalate isomerase large subunit (NCBI) 0.27 b2021 hisC histidinol-phosphate aminotransferase (NCBI) 0.95 12
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS14400 isopropylmalate isomerase 0.24 RR42_RS18910 histidinol-phosphate aminotransferase
Escherichia coli ECOR38 0.51 HEPCGN_08705 leuC1 3-isopropylmalate dehydratase large subunit 1 0.27 HEPCGN_03215 hisC histidinol-phosphate transaminase low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_03585 3-isopropylmalate dehydratase large subunit 0.28 OHPLBJKB_01679 Histidinol-phosphate aminotransferase low > 73
Escherichia coli Nissle 1917 0.51 ECOLIN_RS00390 3-isopropylmalate dehydratase large subunit 0.27 ECOLIN_RS11950 histidinol-phosphate transaminase
Escherichia coli BL21 0.51 ECD_00074 3-isopropylmalate dehydratase large subunit 0.27 ECD_01923 histidinol-phosphate aminotransferase 0.63 24
Escherichia coli ECOR27 0.51 NOLOHH_03070 leuC1 3-isopropylmalate dehydratase large subunit 1 0.28 NOLOHH_15825 hisC histidinol-phosphate transaminase low > 57
Escherichia coli ECRC98 0.51 JDDGAC_14320 leuC1 3-isopropylmalate dehydratase large subunit 1 0.28 JDDGAC_28620 hisC histidinol-phosphate transaminase
Escherichia coli ECRC102 0.51 NIAGMN_08575 leuC1 3-isopropylmalate dehydratase large subunit 1 0.28 NIAGMN_22455 hisC histidinol-phosphate transaminase
Escherichia coli ECRC99 0.51 KEDOAH_17430 leuC1 3-isopropylmalate dehydratase large subunit 1 0.28 KEDOAH_03640 hisC histidinol-phosphate transaminase
Escherichia coli ECRC101 0.51 OKFHMN_10725 leuC1 3-isopropylmalate dehydratase large subunit 1 0.28 OKFHMN_24510 hisC histidinol-phosphate transaminase
Phaeobacter inhibens DSM 17395 0.51 PGA1_c29780 3-isopropylmalate dehydratase large subunit 0.17 PGA1_c25240 histidinol-phosphate aminotransferase [EC:2.6.1.9] (from data)
Escherichia coli ECRC101 0.51 MCAODC_01240 leuC1 3-isopropylmalate dehydratase large subunit 1 0.28 MCAODC_20430 hisC histidinol-phosphate transaminase
Serratia liquefaciens MT49 0.51 IAI46_03345 3-isopropylmalate dehydratase large subunit 0.27 IAI46_08205 histidinol-phosphate transaminase low > 86
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS14540 3-isopropylmalate dehydratase large subunit 0.21 ABZR87_RS02495 histidinol-phosphate transaminase low > 80
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_06075 3-isopropylmalate dehydratase, large subunit 0.25 H281DRAFT_05654 histidinol phosphate aminotransferase apoenzyme low > 103
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF166 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.28 GFF3911 Histidinol-phosphate aminotransferase (EC 2.6.1.9) low > 78
Castellaniella sp019104865 MT123 0.51 ABCV34_RS04290 3-isopropylmalate dehydratase large subunit 0.19 ABCV34_RS07105 histidinol-phosphate transaminase low > 48
Pseudomonas simiae WCS417 0.51 PS417_18600 isopropylmalate isomerase 0.20 PS417_08130 aspartate aminotransferase low > 88
Enterobacter asburiae PDN3 0.51 EX28DRAFT_3668 3-isopropylmalate dehydratase, large subunit 0.29 EX28DRAFT_0538 histidinol-phosphate aminotransferase 0.92 11
Shewanella loihica PV-4 0.51 Shew_3470 isopropylmalate isomerase large subunit (RefSeq) 0.24 Shew_2199 histidinol-phosphate aminotransferase (RefSeq) 0.97 30
Shewanella oneidensis MR-1 0.51 SO4234 leuC 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) 0.23 SO2072 hisC histidinol-phosphate aminotransferase (NCBI ptt file) 0.98 5
Alteromonas macleodii MIT1002 0.51 MIT1002_00947 3-isopropylmalate dehydratase large subunit 0.27 MIT1002_02634 Histidinol-phosphate aminotransferase 0.96 40
Pseudomonas sp. RS175 0.50 PFR28_02824 3-isopropylmalate dehydratase large subunit 0.21 PFR28_00908 Histidinol-phosphate aminotransferase low > 88
Ralstonia solanacearum GMI1000 0.50 RS_RS10000 3-isopropylmalate dehydratase large subunit 0.22 RS_RS14785 histidinol-phosphate aminotransferase 1
Paraburkholderia graminis OAS925 0.50 ABIE53_004801 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit 0.25 ABIE53_003700 histidinol-phosphate aminotransferase low > 113
Sphingomonas koreensis DSMZ 15582 0.50 Ga0059261_4223 3-isopropylmalate dehydratase, large subunit 0.19 Ga0059261_2299 histidinol-phosphate aminotransferase 0.99 11
Acidovorax sp. GW101-3H11 0.50 Ac3H11_1525 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.19 Ac3H11_4729 histidinol-phosphate transaminase (EC 2.6.1.9) (from data)
Enterobacter sp. TBS_079 0.50 MPMX20_00767 3-isopropylmalate dehydratase large subunit 1 0.29 MPMX20_03003 Histidinol-phosphate aminotransferase 0.93 16
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS20580 3-isopropylmalate dehydratase large subunit 0.20 PFLU_RS08100 histidinol-phosphate transaminase low > 109
Ralstonia solanacearum UW163 0.50 UW163_RS11105 3-isopropylmalate dehydratase large subunit 0.22 UW163_RS06775 histidinol-phosphate transaminase
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS02620 3-isopropylmalate dehydratase large subunit 0.22 RALBFv3_RS06840 histidinol-phosphate transaminase
Pseudomonas fluorescens SBW25 0.50 PFLU_RS20580 3-isopropylmalate dehydratase large subunit 0.20 PFLU_RS08100 histidinol-phosphate transaminase low > 109
Erwinia tracheiphila SCR3 0.50 LU632_RS02870 leuC 3-isopropylmalate dehydratase large subunit 0.28 LU632_RS08940 hisC histidinol-phosphate transaminase 0.79 25
Agrobacterium fabrum C58 0.50 Atu2709 3-isopropylmalate dehydratase, large subunit 0.15 Atu3612 histidinol-phosphate aminotransferase
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS33915 isopropylmalate isomerase 0.25 BPHYT_RS17705 histidinol-phosphate aminotransferase low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF3363 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.21 GFF1313 Histidinol-phosphate aminotransferase (EC 2.6.1.9) low > 90
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_21400 isopropylmalate isomerase 0.20 AO356_03460 aspartate aminotransferase low > 104
Pseudomonas stutzeri RCH2 0.50 Psest_2591 3-isopropylmalate dehydratase, large subunit 0.20 Psest_1985 histidinol-phosphate aminotransferase low > 67
Ralstonia solanacearum PSI07 0.50 RPSI07_RS14695 3-isopropylmalate dehydratase large subunit 0.22 RPSI07_RS10395 histidinol-phosphate transaminase
Lysobacter sp. OAE881 0.50 ABIE51_RS17575 3-isopropylmalate dehydratase large subunit 0.27 ABIE51_RS13320 histidinol-phosphate transaminase 0.93 29
Pseudomonas fluorescens FW300-N1B4 0.50 Pf1N1B4_15 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.21 Pf1N1B4_349 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) 0.48 77
Rhizobium sp. OAE497 0.50 ABIE40_RS18380 3-isopropylmalate dehydratase large subunit 0.16 ABIE40_RS17595 histidinol-phosphate transaminase 0.94 21
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_63 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.20 Pf6N2E2_2519 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) low > 103
Klebsiella michiganensis M5al 0.50 BWI76_RS04670 3-isopropylmalate dehydratase large subunit 0.28 BWI76_RS18930 histidinol-phosphate transaminase 0.87 35
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_20620 isopropylmalate isomerase 0.21 AO353_02065 aspartate aminotransferase 0.51 82
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_3948 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.20 PfGW456L13_2177 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) low > 87
Pseudomonas putida KT2440 0.50 PP_1985 3-isopropylmalate dehydratase large subunit 0.17 PP_0967 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.89 8
Acinetobacter radioresistens SK82 0.50 MPMX26_00345 3-isopropylmalate dehydratase large subunit 0.16 MPMX26_02586 Histidinol-phosphate aminotransferase 0.92 18
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS16515 isopropylmalate isomerase 0.23 HSERO_RS20335 histidinol-phosphate aminotransferase low > 78
Shewanella amazonensis SB2B 0.50 Sama_0337 isopropylmalate isomerase large subunit (RefSeq) 0.20 Sama_1943 histidinol-phosphate aminotransferase (RefSeq) 0.95 15
Pseudomonas sp. S08-1 0.50 OH686_04480 3-isopropylmalate dehydratase large subunit 0.20 OH686_20875 histidinol-phosphate transaminase low > 80
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.1049.1 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.31 Xcc-8004.2947.1 Histidinol-phosphate aminotransferase (EC 2.6.1.9) 0.90 13
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_12605 3-isopropylmalate dehydratase large subunit 0.27 CSW01_05755 histidinol-phosphate transaminase low > 62
Dechlorosoma suillum PS 0.49 Dsui_3201 3-isopropylmalate dehydratase, large subunit 0.16 Dsui_1414 histidinol-phosphate aminotransferase
Dinoroseobacter shibae DFL-12 0.49 Dshi_0085 3-isopropylmalate dehydratase, large subunit (RefSeq) 0.16 Dshi_2946 histidinol-phosphate aminotransferase (RefSeq)
Rhodanobacter denitrificans FW104-10B01 0.49 LRK54_RS10335 3-isopropylmalate dehydratase large subunit 0.32 LRK54_RS01600 histidinol-phosphate transaminase 0.61 53
Rhodanobacter denitrificans MT42 0.49 LRK55_RS09975 3-isopropylmalate dehydratase large subunit 0.32 LRK55_RS01380 histidinol-phosphate transaminase low > 63
Variovorax sp. SCN45 0.49 GFF3890 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.23 GFF5348 Histidinol-phosphate aminotransferase (EC 2.6.1.9) low > 127
Variovorax sp. OAS795 0.49 ABID97_RS08465 3-isopropylmalate dehydratase large subunit 0.23 ABID97_RS23145 histidinol-phosphate transaminase
Synechococcus elongatus PCC 7942 0.48 Synpcc7942_1898 leuC isopropylmalate isomerase large subunit 0.19 Synpcc7942_1030 hisC histidinol-phosphate aminotransferase
Bifidobacterium breve UCC2003 0.48 BBR_RS19630 3-isopropylmalate dehydratase large subunit 0.16 BBR_RS17050 histidinol-phosphate transaminase low > 34
Caulobacter crescentus NA1000 0.48 CCNA_00196 3-isopropylmalate dehydratase large subunit 0.19 CCNA_02306 histidinol-phosphate aminotransferase 0.96 9
Caulobacter crescentus NA1000 Δfur 0.48 CCNA_00196 3-isopropylmalate dehydratase large subunit 0.19 CCNA_02306 histidinol-phosphate aminotransferase low > 67
Dyella japonica UNC79MFTsu3.2 0.48 ABZR86_RS15960 3-isopropylmalate dehydratase large subunit 0.30 ABZR86_RS06725 histidinol-phosphate transaminase 0.95 25
Brevundimonas sp. GW460-12-10-14-LB2 0.47 A4249_RS10005 3-isopropylmalate dehydratase large subunit 0.16 A4249_RS11450 histidinol-phosphate transaminase low > 48
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_13585 leuC 3-isopropylmalate dehydratase large subunit 0.32 OKGIIK_04955 hisC histidinol-phosphate transaminase low > 52
Methanococcus maripaludis JJ 0.22 MMJJ_RS08425 3-isopropylmalate dehydratase large subunit 0.21 MMJJ_RS08090 histidinol-phosphate transaminase
Methanococcus maripaludis S2 0.22 MMP_RS05930 3-isopropylmalate dehydratase large subunit 0.21 MMP_RS06260 histidinol-phosphate transaminase
Desulfovibrio vulgaris Hildenborough JW710 0.20 DVU2982 leuC 3-isopropylmalate dehydratase / (R)-citramalate isomerase, large subunit LeuC (EC 4.2.1.33; EC 4.2.1.35) (from data) 0.25 DVU1029 hisC histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.83 36
Desulfovibrio vulgaris Miyazaki F 0.20 DvMF_1792 3-isopropylmalate dehydratase large subunit (RefSeq) 0.23 DvMF_0908 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.96 8

Not shown: 4 genomes with orthologs for BT1860 only; 1 genomes with orthologs for BT0202 only