Conservation of cofitness between SO2441 and SO1142 in Shewanella oneidensis MR-1

110 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO2441 thiG thiG protein (NCBI ptt file) 1.0 SO1142 carB carbamoyl-phosphate synthase, large subunit (NCBI ptt file) 0.34 18
Shewanella sp. ANA-3 0.95 Shewana3_1940 thiG thiazole synthase (RefSeq) 0.98 Shewana3_0968 carB carbamoyl phosphate synthase large subunit (RefSeq) low > 73
Shewanella loihica PV-4 0.73 Shew_2092 thiazole biosynthesis family protein (RefSeq) 0.92 Shew_2838 carB carbamoyl phosphate synthase large subunit (RefSeq) low > 60
Shewanella amazonensis SB2B 0.73 Sama_1856 thiG thiazole synthase (RefSeq) 0.92 Sama_2503 carB carbamoyl phosphate synthase large subunit (RefSeq) low > 62
Dickeya dadantii 3937 0.68 DDA3937_RS01155 thiazole synthase 0.83 DDA3937_RS18305 carbamoyl-phosphate synthase large subunit 0.60 61
Dickeya dianthicola ME23 0.68 DZA65_RS01195 thiazole synthase 0.83 DZA65_RS19380 carbamoyl-phosphate synthase large subunit low > 75
Dickeya dianthicola 67-19 0.67 HGI48_RS01150 thiazole synthase 0.83 HGI48_RS18240 carbamoyl-phosphate synthase large subunit low > 71
Rahnella sp. WP5 0.67 EX31_RS16795 thiazole synthase 0.83 EX31_RS03830 carbamoyl-phosphate synthase large subunit low > 89
Erwinia tracheiphila SCR3 0.66 LU632_RS00950 thiazole synthase 0.83 LU632_RS02750 carB carbamoyl-phosphate synthase large subunit low > 74
Erwinia tracheiphila HP pepo 2.2 0.66 IJEDHG_10865 thiazole synthase 0.83 IJEDHG_06145 carB carbamoyl-phosphate synthase large subunit low > 61
Cellulophaga baltica 18 0.66 M666_RS10615 thiazole synthase 0.43 M666_RS18155 carbamoyl-phosphate synthase large subunit low > 67
Pedobacter sp. GW460-11-11-14-LB5 0.65 CA265_RS20180 thiazole synthase 0.43 CA265_RS20080 carbamoyl phosphate synthase large subunit
Pectobacterium carotovorum WPP14 0.65 HER17_RS20400 thiazole synthase 0.84 HER17_RS02900 carbamoyl-phosphate synthase large subunit low > 75
Serratia liquefaciens MT49 0.65 IAI46_01300 thiazole synthase 0.84 IAI46_03195 carbamoyl-phosphate synthase large subunit low > 86
Pontibacter actiniarum KMM 6156, DSM 19842 0.65 CA264_20420 thiazole synthase 0.43 CA264_15430 carbamoyl phosphate synthase large subunit low > 74
Klebsiella pneumoniae MKP103 0.64 KDGMDA_10020 thiazole synthase 0.84 KDGMDA_12710 carbamoyl-phosphate synthase large subunit low > 95
Mucilaginibacter yixingensis YX-36 DSM 26809 0.64 ABZR88_RS08825 thiazole synthase 0.44 ABZR88_RS20475 carbamoyl-phosphate synthase large subunit
Klebsiella michiganensis M5al 0.63 BWI76_RS01535 thiazole synthase 0.84 BWI76_RS04470 carbamoyl phosphate synthase large subunit low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.63 GFF4202 Thiazole biosynthesis protein ThiG 0.84 GFF213 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_04060 Thiazole synthase 0.85 OHPLBJKB_03624 Carbamoyl-phosphate synthase large chain low > 74
Escherichia coli ECRC99 0.63 KEDOAH_14765 thiG thiazole synthase 0.85 KEDOAH_17215 carB carbamoyl-phosphate synthase large subunit
Escherichia coli ECRC101 0.63 MCAODC_03895 thiG thiazole synthase 0.85 MCAODC_01455 carB carbamoyl-phosphate synthase large subunit 0.52 19
Escherichia coli ECRC62 0.63 BNILDI_05985 thiG thiazole synthase 0.85 BNILDI_08330 carB carbamoyl-phosphate synthase large subunit low > 75
Escherichia coli BW25113 0.63 b3991 thiG thiamin biosynthesis, thiazole moiety (VIMSS) 0.85 b0033 carB carbamoyl-phosphate synthase large subunit (NCBI) low > 76
Escherichia coli ECRC100 0.63 OKFHMN_13395 thiG thiazole synthase 0.85 OKFHMN_10940 carB carbamoyl-phosphate synthase large subunit 0.67 49
Enterobacter sp. TBS_079 0.63 MPMX20_00213 Thiazole synthase 0.84 MPMX20_00740 Carbamoyl-phosphate synthase large chain low > 85
Escherichia coli ECRC102 0.63 NIAGMN_11145 thiG thiazole synthase 0.85 NIAGMN_08790 carB carbamoyl-phosphate synthase large subunit 0.61 48
Escherichia coli ECRC98 0.63 JDDGAC_17020 thiG thiazole synthase 0.85 JDDGAC_14535 carB carbamoyl-phosphate synthase large subunit low > 87
Escherichia coli ECOR27 0.63 NOLOHH_05540 thiG thiazole synthase 0.85 NOLOHH_03270 carB carbamoyl-phosphate synthase large subunit 0.73 22
Enterobacter asburiae PDN3 0.63 EX28DRAFT_4532 Uncharacterized enzyme of thiazole biosynthesis 0.84 EX28DRAFT_3638 carbamoyl-phosphate synthase, large subunit
Escherichia coli BL21 0.63 ECD_03867 thiamine biosynthesis ThiGH complex subunit 0.85 ECD_00037 carbamoyl-phosphate synthase large subunit 0.38 44
Bacteroides thetaiotaomicron VPI-5482 0.63 BT0651 thiamine biosynthesis protein ThiG (NCBI ptt file) 0.36 BT0557 carbamyl phosphate synthetase (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.62 BACOVA_02359 thiazole biosynthesis protein ThiG 0.35 BACOVA_03752 carbamoyl-phosphate synthase, large subunit low > 96
Escherichia coli ECOR38 0.62 HEPCGN_12030 thiG thiazole synthase 0.85 HEPCGN_08925 carB carbamoyl-phosphate synthase large subunit 0.76 2
Echinicola vietnamensis KMM 6221, DSM 17526 0.62 Echvi_3564 Uncharacterized enzyme of thiazole biosynthesis 0.43 Echvi_0768 carbamoyl-phosphate synthase, large subunit
Escherichia fergusonii Becca 0.62 EFB2_04621 Thiazole synthase 0.85 EFB2_04012 Carbamoyl-phosphate synthase large chain low > 86
Escherichia coli Nissle 1917 0.62 ECOLIN_RS23020 thiazole synthase 0.85 ECOLIN_RS00180 carbamoyl-phosphate synthase large subunit 0.38 21
Vibrio cholerae E7946 ATCC 55056 0.62 CSW01_00355 thiazole synthase 0.87 CSW01_12100 carbamoyl-phosphate synthase large chain low > 62
Phocaeicola vulgatus CL09T03C04 0.62 HMPREF1058_RS03285 thiazole synthase 0.36 HMPREF1058_RS06870 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit low > 67
Phocaeicola dorei CL03T12C01 0.61 ABI39_RS17755 thiazole synthase 0.36 ABI39_RS20665 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit low > 72
Alteromonas macleodii MIT1002 0.61 MIT1002_00093 Thiazole synthase 0.80 MIT1002_01467 Carbamoyl-phosphate synthase large chain low > 70
Bacteroides stercoris CC31F 0.61 HMPREF1181_RS14680 thiazole synthase 0.35 HMPREF1181_RS16075 carbamoyl-phosphate synthase large subunit low > 56
Synechocystis sp000284455 PCC 6803 0.46 SGL_RS19985 thiazole synthase 0.57 SGL_RS14530 carbamoyl-phosphate synthase large subunit
Desulfovibrio vulgaris Hildenborough JW710 0.45 DVU2094 thiG thiG protein (TIGR) 0.59 DVU0162 carB carbamoyl-phosphate synthase, large subunit (TIGR)
Synechococcus elongatus PCC 7942 0.45 Synpcc7942_0576 thiG thiazole synthase 0.58 Synpcc7942_0711 carB carbamoyl phosphate synthase large subunit
Fusobacterium nucleatum SB010 0.43 HUW76_10275 thiazole synthase 0.46 HUW76_08750 carbamoyl-phosphate synthase large subunit low > 35
Bifidobacterium breve UCC2003 0.43 BBR_RS13965 thiazole synthase 0.51 BBR_RS13635 carbamoyl-phosphate synthase large subunit low > 34
Desulfovibrio vulgaris Miyazaki F 0.43 DvMF_0800 thiG thiazole synthase (RefSeq) 0.58 DvMF_2306 carbamoyl-phosphate synthase, large subunit (RefSeq) low > 51
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_0291 thiazole-phosphate synthase 0.72 B158DRAFT_0616 carbamoyl-phosphate synthase, large subunit
Azospirillum sp. SherDot2 0.41 MPMX19_00262 Thiazole synthase 0.59 MPMX19_02299 Carbamoyl-phosphate synthase large chain
Xanthobacter sp. DMC5 0.41 GFF2432 Thiazole synthase 0.61 GFF4681 Carbamoyl-phosphate synthase large chain
Mycobacterium tuberculosis H37Rv 0.39 Rv0417 Probable thiamin biosynthesis protein ThiG (thiazole biosynthesis protein) 0.50 Rv1384 Probable carbamoyl-phosphate synthase large chain CarB (carbamoyl-phosphate synthetase ammonia chain)
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS11645 thiazole synthase 0.70 ABZR86_RS05600 carbamoyl-phosphate synthase large subunit
Lysobacter sp. OAE881 0.39 ABIE51_RS16545 thiazole synthase 0.68 ABIE51_RS11615 carbamoyl-phosphate synthase large subunit
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.1284.1 Thiazole biosynthesis protein ThiG 0.69 Xcc-8004.2912.1 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Dechlorosoma suillum PS 0.39 Dsui_1014 putative enzyme of thiazole biosynthesis 0.68 Dsui_3064 carbamoyl-phosphate synthase, large subunit
Castellaniella sp019104865 MT123 0.39 ABCV34_RS14510 thiazole synthase 0.66 ABCV34_RS15510 carbamoyl-phosphate synthase large subunit
Rhodopseudomonas palustris CGA009 0.39 TX73_018530 thiazole synthase 0.60 TX73_021090 carbamoyl-phosphate synthase large subunit
Bosea sp. OAE506 0.38 ABIE41_RS20185 thiazole synthase 0.58 ABIE41_RS11910 carbamoyl-phosphate synthase large subunit
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_11895 thiS thiazole synthase 0.69 OKGIIK_07295 carB carbamoyl-phosphate synthase large subunit low > 53
Methylophilus sp. DMC18 0.38 GFF2792 Thiazole synthase 0.73 GFF312 Carbamoyl-phosphate synthase large chain
Variovorax sp. OAS795 0.38 ABID97_RS15315 thiazole synthase 0.67 ABID97_RS17080 carbamoyl-phosphate synthase large subunit
Marinobacter adhaerens HP15 0.38 HP15_3274 thiazole synthase 0.75 HP15_3077 carbamoyl-phosphate synthase, large subunit
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS02130 thiazole synthase 0.67 HSERO_RS06925 carbamoyl phosphate synthase large subunit
Pseudomonas sp. S08-1 0.38 OH686_14285 Thiazole synthase 0.76 OH686_17080 Carbamoyl-phosphate synthase large chain
Pseudomonas segetis P6 0.38 MPMX49_03598 Thiazole synthase 0.76 MPMX49_01187 Carbamoyl-phosphate synthase large chain
Pseudomonas sp. DMC3 0.37 GFF219 Thiazole synthase 0.77 GFF4977 Carbamoyl-phosphate synthase large chain
Azospirillum brasilense Sp245 0.37 AZOBR_RS30960 thiazole synthase 0.59 AZOBR_RS12895 carbamoyl phosphate synthase large subunit
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_1000 Thiazole biosynthesis protein ThiG 0.77 PfGW456L13_5099 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF246 Thiazole biosynthesis protein ThiG 0.66 GFF4898 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pseudomonas sp. SVBP6 0.37 COO64_RS12950 thiazole synthase 0.76 COO64_RS15240 carB carbamoyl-phosphate synthase large subunit 0.70 66
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_4740 thiazole-phosphate synthase 0.77 Psyr_4191 carbamoyl-phosphate synthase large subunit
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_4740 thiazole-phosphate synthase 0.77 Psyr_4191 carbamoyl-phosphate synthase large subunit
Pseudomonas sp. RS175 0.37 PFR28_04252 Thiazole synthase 0.77 PFR28_00077 Carbamoyl-phosphate synthase large chain
Acinetobacter baumannii LAC-4 0.37 RR41_RS06275 thiazole synthase 0.73 RR41_RS04155 carbamoyl-phosphate synthase large subunit
Pseudomonas aeruginosa PA14 0.37 IKLFDK_23520 Thiazole synthase 0.77 IKLFDK_29815 carbamoyl-phosphate synthase large subunit low > 100
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_08215 thiazole synthase 0.77 AO353_05630 carbamoyl phosphate synthase large subunit
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS28420 thiazole synthase 0.77 PFLU_RS25880 carbamoyl-phosphate synthase large subunit
Caulobacter crescentus NA1000 0.37 CCNA_01957 thiazole biosynthesis protein ThiG 0.59 CCNA_02994 carbamoyl-phosphate synthase large chain
Pseudomonas fluorescens SBW25 0.37 PFLU_RS28420 thiazole synthase 0.77 PFLU_RS25880 carbamoyl-phosphate synthase large subunit
Pseudomonas stutzeri RCH2 0.37 Psest_0267 Uncharacterized enzyme of thiazole biosynthesis 0.76 Psest_0968 carbamoyl-phosphate synthase, large subunit
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_01957 thiazole biosynthesis protein ThiG 0.59 CCNA_02994 carbamoyl-phosphate synthase large chain
Pseudomonas fluorescens FW300-N2E2 0.37 Pf6N2E2_4590 Thiazole biosynthesis protein ThiG 0.77 Pf6N2E2_3364 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pseudomonas fluorescens FW300-N2C3 0.37 AO356_13375 thiazole synthase 0.77 AO356_07480 carbamoyl phosphate synthase large subunit low > 104
Pseudomonas putida KT2440 0.37 PP_5104 thiazole synthase 0.77 PP_4723 Carbamoyl-phosphate synthase large chain 0.37 70
Pseudomonas lactucae CFBP13502 0.36 GEMAOFIL_05492 Thiazole synthase 0.77 GEMAOFIL_04958 Carbamoyl-phosphate synthase large chain
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_2331 Thiazole biosynthesis protein ThiG 0.77 Pf1N1B4_1172 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pantoea agglomerans CFBP13505 P0401 0.36 PagCFBP13505_RS14285 thiazole synthase 0.83 PagCFBP13505_RS12880 carbamoyl-phosphate synthase large subunit low > 74
Rhodanobacter sp000427505 FW510-R12 0.36 LRK53_RS03810 thiazole synthase 0.70 LRK53_RS11360 carbamoyl-phosphate synthase large subunit
Pseudomonas simiae WCS417 0.36 PS417_26775 thiazole synthase 0.77 PS417_24040 carbamoyl phosphate synthase large subunit
Acinetobacter radioresistens SK82 0.36 MPMX26_01107 Thiazole synthase 0.73 MPMX26_00766 Carbamoyl-phosphate synthase large chain low > 36
Paraburkholderia graminis OAS925 0.36 ABIE53_003714 thiazole synthase 0.67 ABIE53_003004 carbamoyl-phosphate synthase large subunit
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS17775 thiazole synthase 0.67 BPHYT_RS14190 carbamoyl phosphate synthase large subunit
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_05639 thiazole-phosphate synthase 0.67 H281DRAFT_04403 carbamoyl-phosphate synthase large subunit
Variovorax sp. SCN45 0.36 GFF1188 Thiazole synthase (EC 2.8.1.10) 0.67 GFF376 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Erwinia amylovora T8 0.36 OLJFJH_00240 Thiazole synthase 0.82 OLJFJH_01395 carbamoyl-phosphate synthase large subunit
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS27930 thiazole synthase 0.67 QEN71_RS04780 carbamoyl-phosphate synthase large subunit
Pseudomonas sp. BP01 0.36 JOY50_RS20860 thiazole synthase 0.77 JOY50_RS26765 carB carbamoyl-phosphate synthase large subunit
Pantoea sp. MT58 0.35 IAI47_20700 thiazole synthase 0.83 IAI47_16115 carbamoyl-phosphate synthase large subunit 0.36 42
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS01305 thiazole synthase 0.66 RR42_RS13510 carbamoyl phosphate synthase large subunit
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS09925 thiazole synthase 0.67 RALBFv3_RS02190 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum UW163 0.35 UW163_RS03655 thiazole synthase 0.67 UW163_RS15500 carbamoyl-phosphate synthase large subunit
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS04800 thiazole synthase 0.67 ABZR87_RS14140 carbamoyl-phosphate synthase large subunit
Agrobacterium fabrum C58 0.35 Atu2566 thiamin biosynthesis ThiG 0.59 Atu2178 carbamoylphosphate synthase large subunit
Ralstonia solanacearum PSI07 0.34 RPSI07_RS23435 thiazole synthase 0.67 RPSI07_RS15255 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum GMI1000 0.34 RS_RS00535 thiazole synthase 0.67 RS_RS07630 carbamoyl-phosphate synthase large chain
Acidovorax sp. GW101-3H11 0.34 Ac3H11_1059 Thiazole biosynthesis protein ThiG 0.67 Ac3H11_436 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Phaeobacter inhibens DSM 17395 0.33 PGA1_c09070 thiazole biosynthesis protein ThiG 0.58 PGA1_c24560 carbamoyl-phosphate synthase large chain low > 62
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS07975 thiazole synthase 0.59 A4249_RS00725 carbamoyl-phosphate synthase large subunit
Sinorhizobium meliloti 1021 0.31 SM_b20617 thiazole synthase 0.59 SMc01215 carbamoyl phosphate synthase large subunit
Dinoroseobacter shibae DFL-12 0.31 Dshi_0912 thiazole biosynthesis family protein (RefSeq) 0.59 Dshi_2639 carbamoyl-phosphate synthase, large subunit (RefSeq) low > 64

Not shown: 0 genomes with orthologs for SO2441 only; 10 genomes with orthologs for SO1142 only