Conservation of cofitness between Rru_A3575 and Rru_A0404 in Rhodospirillum rubrum S1H

96 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodospirillum rubrum S1H 1.0 Rru_A3575 Acetate--CoA ligase (NCBI) 1.0 Rru_A0404 Amidophosphoribosyl transferase (NCBI) 0.57 20
Magnetospirillum magneticum AMB-1 0.79 AMB_RS21140 acetate--CoA ligase 0.71 AMB_RS10545 amidophosphoribosyltransferase — —
Azospirillum brasilense Sp245 0.78 AZOBR_RS00270 acetyl-CoA synthetase 0.66 AZOBR_RS08310 amidophosphoribosyltransferase low > 97
Azospirillum sp. SherDot2 0.76 MPMX19_02038 Acetyl-coenzyme A synthetase 0.66 MPMX19_00906 Amidophosphoribosyltransferase 0.63 53
Bosea sp. OAE506 0.75 ABIE41_RS05675 acetate--CoA ligase 0.62 ABIE41_RS17810 amidophosphoribosyltransferase low > 77
Rhodopseudomonas palustris CGA009 0.75 TX73_001095 acetate--CoA ligase 0.60 TX73_015990 amidophosphoribosyltransferase — —
Marinobacter adhaerens HP15 0.73 HP15_811 acetyl-CoA synthetase 0.30 HP15_1821 amidophosphoribosyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.73 Xcc-8004.5157.1 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.30 Xcc-8004.4073.1 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 74
Shewanella amazonensis SB2B 0.72 Sama_2079 acetyl-CoA synthetase (RefSeq) 0.32 Sama_2146 amidophosphoribosyltransferase (RefSeq) low > 62
Sinorhizobium meliloti 1021 0.72 SMc04093 acetyl-CoA synthetase 0.57 SMc00554 amidophosphoribosyltransferase 0.39 61
Rhodanobacter denitrificans FW104-10B01 0.72 LRK54_RS08420 acetate--CoA ligase 0.31 LRK54_RS01340 amidophosphoribosyltransferase low > 59
Rhodanobacter denitrificans MT42 0.72 LRK55_RS08185 acetate--CoA ligase 0.31 LRK55_RS01105 amidophosphoribosyltransferase low > 63
Dyella japonica UNC79MFTsu3.2 0.72 ABZR86_RS15200 acetate--CoA ligase 0.30 ABZR86_RS06775 amidophosphoribosyltransferase 0.68 31
Shewanella sp. ANA-3 0.71 Shewana3_2523 acetyl-CoA synthetase (RefSeq) 0.32 Shewana3_1483 amidophosphoribosyltransferase (RefSeq) 0.55 21
Shewanella oneidensis MR-1 0.71 SO2743 acs acetyl-coenzyme A synthetase (NCBI ptt file) 0.32 SO3064 purF amidophosphoribosyltransferase (NCBI ptt file) low > 76
Rhodanobacter sp. FW510-T8 0.71 OKGIIK_15190 acs acetate--CoA ligase 0.30 OKGIIK_05570 purF amidophosphoribosyltransferase low > 52
Pseudomonas sp. S08-1 0.71 OH686_21250 acetate--CoA ligase 0.29 OH686_04420 amidophosphoribosyltransferase — —
Agrobacterium fabrum C58 0.71 Atu2745 acetyl-coenzyme A synthetase 0.58 Atu1075 amidophosphoribosyltransferase 0.40 24
Lysobacter sp. OAE881 0.71 ABIE51_RS01660 acetate--CoA ligase 0.30 ABIE51_RS06180 amidophosphoribosyltransferase low > 62
Pseudomonas putida KT2440 0.71 PP_4487 acetyl-CoA synthetase 0.29 PP_2000 amidophosphoribosyl transferase 0.17 51
Rhizobium sp. OAE497 0.71 ABIE40_RS19160 acetate--CoA ligase 0.59 ABIE40_RS06270 amidophosphoribosyltransferase low > 107
Brevundimonas sp. GW460-12-10-14-LB2 0.70 A4249_RS15190 acetate--CoA ligase 0.55 A4249_RS03735 amidophosphoribosyltransferase — —
Vibrio cholerae E7946 ATCC 55056 0.70 CSW01_01520 acetyl-coenzyme A synthetase 0.30 CSW01_05115 amidophosphoribosyltransferase low > 62
Pseudomonas sp. RS175 0.70 PFR28_03289 Acetyl-coenzyme A synthetase 0.29 PFR28_02811 Amidophosphoribosyltransferase low > 88
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_3572 acetyl-coenzyme A synthetase 0.29 Psyr_1668 amidophosphoribosyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_3572 acetyl-coenzyme A synthetase 0.29 Psyr_1668 amidophosphoribosyltransferase low > 86
Sphingomonas koreensis DSMZ 15582 0.70 Ga0059261_1313 acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.63 Ga0059261_3626 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas fluorescens FW300-N2C3 0.70 AO356_18695 Acetyl-coenzyme A synthetase (EC 6.2.1.1) (from data) 0.29 AO356_21465 amidophosphoribosyltransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.70 Pf6N2E2_5659 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.29 Pf6N2E2_76 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Dinoroseobacter shibae DFL-12 0.70 Dshi_3553 acetate--CoA ligase (RefSeq) 0.58 Dshi_2132 amidophosphoribosyltransferase (RefSeq) — —
Klebsiella michiganensis M5al 0.70 BWI76_RS02095 acetyl-coenzyme A synthetase 0.31 BWI76_RS20350 amidophosphoribosyltransferase low > 92
Shewanella loihica PV-4 0.69 Shew_1533 acetyl-CoA synthetase (RefSeq) 0.33 Shew_2302 amidophosphoribosyltransferase (RefSeq) low > 60
Caulobacter crescentus NA1000 Δfur 0.69 CCNA_03696 acetyl-coenzyme A synthetase 0.61 CCNA_01730 amidophosphoribosyltransferase low > 67
Caulobacter crescentus NA1000 0.69 CCNA_03696 acetyl-coenzyme A synthetase 0.61 CCNA_01730 amidophosphoribosyltransferase low > 66
Pseudomonas fluorescens FW300-N2E3 0.69 AO353_03060 Acetyl-coenzyme A synthetase (EC 6.2.1.1) (from data) 0.29 AO353_20690 amidophosphoribosyltransferase — —
Pseudomonas fluorescens SBW25 0.69 PFLU_RS23355 acetate--CoA ligase 0.29 PFLU_RS20515 amidophosphoribosyltransferase low > 109
Dickeya dianthicola ME23 0.69 DZA65_RS03695 acetate--CoA ligase 0.32 DZA65_RS15335 amidophosphoribosyltransferase low > 75
Dickeya dianthicola 67-19 0.69 HGI48_RS03580 acetate--CoA ligase 0.32 HGI48_RS14405 amidophosphoribosyltransferase low > 71
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS23355 acetate--CoA ligase 0.29 PFLU_RS20515 amidophosphoribosyltransferase low > 109
Dickeya dadantii 3937 0.69 DDA3937_RS03480 acetate--CoA ligase 0.32 DDA3937_RS14435 amidophosphoribosyltransferase low > 74
Pseudomonas simiae WCS417 0.69 PS417_21750 acetyl-CoA synthetase 0.29 PS417_18535 amidophosphoribosyltransferase — —
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_1963 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.29 PfGW456L13_3935 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Escherichia fergusonii Becca 0.69 EFB2_04520 Acetyl-coenzyme A synthetase 0.31 EFB2_01546 Amidophosphoribosyltransferase low > 86
Escherichia coli Nissle 1917 0.69 ECOLIN_RS23550 acetate--CoA ligase 0.31 ECOLIN_RS13405 amidophosphoribosyltransferase — —
Escherichia coli BW25113 0.69 b4069 acs acetyl-coenzyme A synthetase (NCBI) 0.31 b2312 purF amidophosphoribosyltransferase (NCBI) low > 76
Escherichia coli ECRC62 0.69 BNILDI_06445 acs acetate--CoA ligase 0.31 BNILDI_13255 purF amidophosphoribosyltransferase low > 75
Escherichia coli ECOR27 0.69 NOLOHH_05080 acs acetate--CoA ligase 0.31 NOLOHH_14335 purF amidophosphoribosyltransferase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.69 OHPLBJKB_03971 Acetyl-coenzyme A synthetase 0.31 OHPLBJKB_01393 Amidophosphoribosyltransferase 0.31 71
Escherichia coli BL21 0.69 ECD_03941 acetyl-CoA synthetase 0.31 ECD_02237 amidophosphoribosyltransferase low > 61
Serratia liquefaciens MT49 0.69 IAI46_01405 acetate--CoA ligase 0.31 IAI46_17810 amidophosphoribosyltransferase low > 86
Escherichia coli ECOR38 0.69 HEPCGN_11455 acs acetate--CoA ligase 0.31 HEPCGN_21910 purF amidophosphoribosyltransferase low > 87
Pectobacterium carotovorum WPP14 0.68 HER17_RS17630 acetate--CoA ligase 0.31 HER17_RS07020 amidophosphoribosyltransferase low > 75
Escherichia coli ECRC101 0.68 MCAODC_03340 acs acetate--CoA ligase 0.31 MCAODC_13755 purF amidophosphoribosyltransferase 0.68 13
Escherichia coli ECRC102 0.68 NIAGMN_10675 acs acetate--CoA ligase 0.31 NIAGMN_20485 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC98 0.68 JDDGAC_16465 acs acetate--CoA ligase 0.31 JDDGAC_26675 purF amidophosphoribosyltransferase 0.57 70
Escherichia coli ECRC99 0.68 KEDOAH_15320 acs acetate--CoA ligase 0.31 KEDOAH_05480 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC100 0.68 OKFHMN_12830 acs acetate--CoA ligase 0.31 OKFHMN_22715 purF amidophosphoribosyltransferase low > 80
Rahnella sp. WP5 0.68 EX31_RS09040 acetate--CoA ligase 0.30 EX31_RS19570 amidophosphoribosyltransferase low > 89
Enterobacter sp. TBS_079 0.68 MPMX20_00291 Acetyl-coenzyme A synthetase 0.31 MPMX20_03247 Amidophosphoribosyltransferase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF1452 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.31 GFF1927 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 78
Alteromonas macleodii MIT1002 0.68 MIT1002_03516 Acetyl-coenzyme A synthetase 0.31 MIT1002_02524 Amidophosphoribosyltransferase low > 70
Enterobacter asburiae PDN3 0.68 EX28DRAFT_4232 acetate--CoA ligase 0.31 EX28DRAFT_0292 amidophosphoribosyltransferase (EC 2.4.2.14) low > 76
Pantoea sp. MT58 0.68 IAI47_17715 acetate--CoA ligase 0.31 IAI47_06275 amidophosphoribosyltransferase low > 76
Acinetobacter radioresistens SK82 0.67 MPMX26_02906 Acetyl-coenzyme A synthetase 0.28 MPMX26_01122 Amidophosphoribosyltransferase low > 36
Kangiella aquimarina DSM 16071 0.67 B158DRAFT_0063 acetate--CoA ligase 0.29 B158DRAFT_1488 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Phaeobacter inhibens DSM 17395 0.67 PGA1_c12950 acetyl-coenzyme A synthetase Acs 0.60 PGA1_c10810 amidophosphoribosyltransferase PurF low > 62
Erwinia tracheiphila SCR3 0.67 LU632_RS23305 acs acetate--CoA ligase 0.31 LU632_RS07865 purF amidophosphoribosyltransferase low > 74
Pseudomonas stutzeri RCH2 0.65 Psest_2657 acetate--CoA ligase 0.28 Psest_2579 amidophosphoribosyltransferase low > 67
Desulfovibrio vulgaris Hildenborough JW710 0.58 DVU2969 acetoacetyl-CoA synthase (TIGR) 0.47 DVU0161 purF amidophosphoribosyltransferase (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.58 DvMF_1775 acetate/CoA ligase (RefSeq) 0.46 DvMF_2307 amidophosphoribosyltransferase (RefSeq) low > 51
Echinicola vietnamensis KMM 6221, DSM 17526 0.57 Echvi_1268 acetate--CoA ligase 0.08 Echvi_4653 Glutamine phosphoribosylpyrophosphate amidotransferase — —
Synechococcus elongatus PCC 7942 0.52 Synpcc7942_1352 acsA acetyl-CoA synthetase 0.42 Synpcc7942_0004 purF amidophosphoribosyltransferase — —
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS13880 AMP-dependent synthetase 0.29 RR42_RS14325 amidophosphoribosyltransferase — —
Dechlorosoma suillum PS 0.50 Dsui_2003 acetate--CoA ligase 0.33 Dsui_3186 amidophosphoribosyltransferase — —
Variovorax sp. OAS795 0.50 ABID97_RS27430 acetate--CoA ligase 0.29 ABID97_RS21635 amidophosphoribosyltransferase — —
Castellaniella sp019104865 MT123 0.50 ABCV34_RS00680 acetate--CoA ligase 0.28 ABCV34_RS04130 amidophosphoribosyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF4107 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.30 GFF300 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS14360 acetate--CoA ligase 0.30 ABZR87_RS14465 amidophosphoribosyltransferase — —
Ralstonia solanacearum PSI07 0.49 RPSI07_RS14880 acetate--CoA ligase 0.30 RPSI07_RS14765 amidophosphoribosyltransferase — —
Acidovorax sp. GW101-3H11 0.49 Ac3H11_951 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.30 Ac3H11_2608 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 79
Ralstonia solanacearum GMI1000 0.49 RS_RS09815 acetyl-coenzyme A synthetase 0.30 RS_RS09930 amidophosphoribosyltransferase — —
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS07770 acetyl-CoA synthetase 0.29 HSERO_RS16445 amidophosphoribosyltransferase — —
Ralstonia solanacearum UW163 0.49 UW163_RS11280 acetate--CoA ligase 0.30 UW163_RS11175 amidophosphoribosyltransferase — —
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS02445 acetate--CoA ligase 0.30 RALBFv3_RS02550 amidophosphoribosyltransferase — —
Variovorax sp. SCN45 0.49 GFF475 Acetyl-CoA synthetase (EC 6.2.1.1) 0.29 GFF3089 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 127
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS23765 acetate--CoA ligase 0.30 QEN71_RS17680 amidophosphoribosyltransferase low > 153
Paraburkholderia graminis OAS925 0.48 ABIE53_001664 acetyl-CoA synthetase 0.29 ABIE53_004816 amidophosphoribosyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_04953 acetyl-coenzyme A synthetase 0.30 H281DRAFT_06060 amidophosphoribosyltransferase low > 103
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS27780 acetyl-CoA synthetase 0.30 BPHYT_RS33840 amidophosphoribosyltransferase low > 109
Mycobacterium tuberculosis H37Rv 0.46 Rv3667 Acetyl-coenzyme A synthetase Acs (acetate--CoA ligase) (acetyl-CoA synthetase) (acetyl-CoA synthase) (acyl-activating enzyme) (acetate thiokinase) (acetyl-activating enzyme) (acetate--coenzyme A ligase) (acetyl-coenzyme A synthase) 0.41 Rv0808 Amidophosphoribosyltransferase PurF (glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (gpatase) — —
Methanococcus maripaludis JJ 0.44 MMJJ_RS04645 acetate--CoA ligase 0.40 MMJJ_RS08440 amidophosphoribosyltransferase — —
Methanococcus maripaludis S2 0.44 MMP_RS00845 acetate--CoA ligase 0.39 MMP_RS05915 amidophosphoribosyltransferase — —
Bacteroides thetaiotaomicron VPI-5482 0.15 BT3755 acetyl-coenzyme A synthetase (NCBI ptt file) 0.17 BT4582 amidophosphoribosyltransferase precursor (NCBI ptt file) low > 81
Parabacteroides merdae CL09T00C40 0.15 HMPREF1078_RS10645 AMP-binding protein 0.18 HMPREF1078_RS10430 amidophosphoribosyltransferase low > 61
Bacteroides ovatus ATCC 8483 0.15 BACOVA_03585 AMP-binding enzyme 0.17 BACOVA_05376 putative amidophosphoribosyltransferase low > 94
Phocaeicola vulgatus CL09T03C04 0.14 HMPREF1058_RS08765 AMP-binding protein 0.18 HMPREF1058_RS04675 amidophosphoribosyltransferase low > 67
Bacteroides stercoris CC31F 0.14 HMPREF1181_RS03430 AMP-binding protein 0.18 HMPREF1181_RS13265 amidophosphoribosyltransferase low > 56

Not shown: 3 genomes with orthologs for Rru_A3575 only; 3 genomes with orthologs for Rru_A0404 only