Homologs of Xcc-8004.506.1 from Xanthomonas campestris pv. campestris strain 8004

Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy
SEED: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.506.1 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 100 100
o Lysobacter sp. OAE881 ABIE51_RS01135 ComF family protein insig. 60 100
o Rhodanobacter denitrificans MT42 LRK55_RS09910 ComF family protein cofit 53 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10270 ComF family protein insig. 53 100
o Rhodanobacter sp. FW510-T8 OKGIIK_13640 Competence protein ComF insig. 53 93
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS15860 ComF family protein insig. 51 88
o Pseudomonas syringae pv. syringae B728a Psyr_4688 Phosphoribosyltransferase insig. 44 97
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4688 Phosphoribosyltransferase insig. 44 97
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1146 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 46 88
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2485 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 48 82
o Pseudomonas putida KT2440 PP_0361 putative Competence protein ComF insig. 44 90
o Pseudomonas stutzeri RCH2 Psest_0410 Predicted amidophosphoribosyltransferases insig. 46 95
o Pseudomonas simiae WCS417 PS417_26010 amidophosphoribosyltransferase insig. 42 97
o Kangiella aquimarina DSM 16071 B158DRAFT_0863 Predicted amidophosphoribosyltransferases insig. 39 85
o Pseudomonas sp. RS175 PFR28_04104 hypothetical protein insig. 46 88
o Pseudomonas sp. S08-1 OH686_10360 Competence protein F-related, phosphoribosyltransferase domain / protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 45 88
o Pseudomonas fluorescens FW300-N2E3 AO353_07530 amidophosphoribosyltransferase insig. 42 97
o Pseudomonas fluorescens SBW25 PFLU_RS27655 ComF family protein insig. 41 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS27655 ComF family protein insig. 41 98
o Pseudomonas fluorescens FW300-N2C3 AO356_14130 amidophosphoribosyltransferase insig. 46 95
o Burkholderia phytofirmans PsJN BPHYT_RS02625 competence protein ComF sig. 41 94
o Marinobacter adhaerens HP15 HP15_2487 competence protein ComF insig. 38 89
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4758 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 48 88
o Paraburkholderia graminis OAS925 ABIE53_000670 ComF family protein insig. 40 92
o Cupriavidus basilensis FW507-4G11 RR42_RS01860 amidophosphoribosyltransferase insig. 41 93
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01997 comF family protein insig. 39 90
o Paraburkholderia sabiae LMG 24235 QEN71_RS01480 ComF family protein insig. 41 92
  Desulfovibrio vulgaris Hildenborough JW710 DVU2768 comF family protein (TIGR) insig. 45 73
o Dechlorosoma suillum PS Dsui_1296 putative amidophosphoribosyltransferase cofit 40 91
  Rahnella sp. WP5 EX31_RS04920 DNA utilization protein GntX insig. 40 78
o Ralstonia solanacearum PSI07 RPSI07_RS22380 amidophosphoribosyltransferase strong 41 92
o Herbaspirillum seropedicae SmR1 HSERO_RS20810 amidophosphoribosyltransferase strong 39 90
o Serratia liquefaciens MT49 IAI46_23830 DNA utilization protein GntX insig. 37 90
o Variovorax sp. SCN45 GFF2294 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 40 93
o Variovorax sp. OAS795 ABID97_RS23980 ComF family protein insig. 39 94
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS10930 amidophosphoribosyltransferase no data 40 92
o Ralstonia solanacearum UW163 UW163_RS02650 amidophosphoribosyltransferase insig. 40 92
o Ralstonia sp. UNC404CL21Col ABZR87_RS06780 ComF family protein insig. 36 97
o Magnetospirillum magneticum AMB-1 AMB_RS08105 amidophosphoribosyltransferase insig. 37 93
o Shewanella sp. ANA-3 Shewana3_4009 competence protein ComF (RefSeq) insig. 35 92
  Vibrio cholerae E7946 ATCC 55056 CSW01_13720 DNA utilization protein GntX insig. 38 83
o Dickeya dadantii 3937 DDA3937_RS19650 DNA utilization protein GntX insig. 39 90
o Rhodospirillum rubrum S1H Rru_A0737 Phosphoribosyltransferase (NCBI) cofit 41 92
o Dickeya dianthicola 67-19 HGI48_RS19780 DNA utilization protein GntX insig. 39 83
o Dickeya dianthicola ME23 DZA65_RS20870 DNA utilization protein GntX insig. 39 83
o Azospirillum sp. SherDot2 MPMX19_02427 hypothetical protein insig. 38 89
o Klebsiella michiganensis M5al BWI76_RS26625 gluconate transporter periplasmic gluconate-binding protein insig. 38 89
o Shewanella loihica PV-4 Shew_3629 competence protein ComF (RefSeq) insig. 34 98
  Desulfovibrio vulgaris Miyazaki F DvMF_2857 phosphoribosyltransferase (RefSeq) insig. 47 77
o Shewanella oneidensis MR-1 SO4625 comF competence protein ComF (NCBI ptt file) insig. 35 89
o Pectobacterium carotovorum WPP14 HER17_RS01550 DNA utilization protein GntX insig. 37 83
o Ralstonia solanacearum GMI1000 RS_RS01770 amidophosphoribosyltransferase insig. 38 92
o Azospirillum brasilense Sp245 AZOBR_RS02910 phosphoribosyltransferase insig. 41 92
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF604 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 36 90
o Escherichia coli ECRC101 OKFHMN_16995 gntX DNA utilization protein GntX insig. 35 90
o Escherichia coli ECRC101 MCAODC_07525 gntX DNA utilization protein GntX insig. 35 90
o Escherichia coli ECRC102 NIAGMN_14765 gntX DNA utilization protein GntX insig. 35 90
o Escherichia coli ECRC98 JDDGAC_20625 gntX DNA utilization protein GntX no data 35 90
o Escherichia coli ECRC99 KEDOAH_11145 gntX DNA utilization protein GntX no data 35 90
o Escherichia coli ECOR27 NOLOHH_08780 gntX DNA utilization protein GntX cofit 35 90
o Shewanella amazonensis SB2B Sama_3504 competence protein ComF (RefSeq) insig. 36 89
o Escherichia coli BW25113 b3413 yhgH orf, hypothetical protein (VIMSS) insig. 35 90
o Escherichia coli BL21 ECD_03265 DNA catabolic protein insig. 35 90
o Escherichia coli ECRC62 BNILDI_02735 gntX DNA utilization protein GntX insig. 35 90
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00290 hypothetical protein insig. 35 90
o Escherichia coli ECOR38 HEPCGN_15805 gntX DNA utilization protein GntX cofit 35 90
o Escherichia coli Nissle 1917 ECOLIN_RS19495 DNA utilization protein GntX insig. 35 90
o Acidovorax sp. GW101-3H11 Ac3H11_3895 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 37 83
o Pantoea sp. MT58 IAI47_01785 DNA utilization protein GntX insig. 34 90
o Escherichia fergusonii Becca EFB2_00415 Putative ribose-phosphate pyrophosphokinase insig. 34 90
o Enterobacter asburiae PDN3 EX28DRAFT_4129 Predicted amidophosphoribosyltransferases insig. 35 90
o Enterobacter sp. TBS_079 MPMX20_04300 Putative ribose-phosphate pyrophosphokinase insig. 35 88
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00650 ComF family protein insig. 30 90
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF685 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 40 93
o Erwinia tracheiphila SCR3 LU632_RS22980 phosphoribosyltransferase insig. 32 88
o Bosea sp. OAE506 ABIE41_RS08035 ComF family protein insig. 36 90
  Acinetobacter radioresistens SK82 MPMX26_02733 hypothetical protein insig. 32 79
o Phaeobacter inhibens DSM 17395 PGA1_c34720 phosphoribosyl transferase-like protein sig. 33 93
o Castellaniella sp019104865 MT123 ABCV34_RS14240 phosphoribosyltransferase family protein insig. 34 82
o Rhodopseudomonas palustris CGA009 TX73_003090 ComF family protein insig. 34 94
o Rhizobium sp. OAE497 ABIE40_RS17355 ComF family protein insig. 33 91
o Dinoroseobacter shibae DFL-12 Dshi_3500 competence protein F, putative (RefSeq) insig. 35 93
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1053 Predicted amidophosphoribosyltransferases insig. 30 93
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3601 Predicted amidophosphoribosyltransferases insig. 35 93
  Synechococcus elongatus PCC 7942 Synpcc7942_2404 hypothetical protein insig. 35 76
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19150 amidophosphoribosyltransferase insig. 28 91
o Agrobacterium fabrum C58 Atu3512 competence protein F insig. 33 93
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS11300 phosphoribosyltransferase family protein insig. 30 85
o Bacteroides ovatus ATCC 8483 BACOVA_02030 comF family protein insig. 27 90
o Bacteroides thetaiotaomicron VPI-5482 BT2800 putative amidophosphoribosyl-transferase (NCBI ptt file) insig. 27 90
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13555 ComF family protein insig. 36 70
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17250 competence protein strong 35 54
o Bacteroides stercoris CC31F HMPREF1181_RS00975 ComF family protein insig. 27 93
  Alteromonas macleodii MIT1002 MIT1002_04017 DNA utilization protein GntX insig. 30 62
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09600 ComF family protein insig. 29 85
o Phocaeicola dorei CL03T12C01 ABI39_RS07080 ComF family protein insig. 28 85
o Caulobacter crescentus NA1000 CCNA_00873 amidophosphoribosyltransferase family protein sig. 33 92
o Caulobacter crescentus NA1000 Δfur CCNA_00873 amidophosphoribosyltransferase family protein cofit 33 92
o Sinorhizobium meliloti 1021 SMc02444 hypothetical protein insig. 31 90
  Fusobacterium nucleatum SB010 HUW76_08555 ComF family protein strong 24 77