Homologs of Rv3911 from Mycobacterium tuberculosis H37Rv

Possible alternative RNA polymerase sigma factor SigM
SEED: RNA polymerase sigma-70 factor, ECF subfamily
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

250 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Mycobacterium tuberculosis H37Rv Rv3911 Possible alternative RNA polymerase sigma factor SigM insig. 100 100
  Paraburkholderia graminis OAS925 ABIE53_005146 RNA polymerase sigma factor (sigma-70 family) sig. 39 59
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01538 RNA polymerase sigma-70 factor, ECF subfamily insig. 39 59
  Paraburkholderia sabiae LMG 24235 QEN71_RS18240 RNA polymerase sigma factor insig. 53 38
  Azospirillum sp. SherDot2 MPMX19_05475 hypothetical protein no data 40 62
  Variovorax sp. OAS795 ABID97_RS28845 RNA polymerase sigma factor insig. 49 40
  Lysobacter sp. OAE881 ABIE51_RS16295 sigma-70 family RNA polymerase sigma factor insig. 31 75
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4220 RNA polymerase sigma factor RpoE insig. 32 73
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS22010 RNA polymerase sigma factor insig. 31 63
  Magnetospirillum magneticum AMB-1 AMB_RS14160 RNA polymerase sigma factor cofit 36 66
  Castellaniella sp019104865 MT123 ABCV34_RS07155 RNA polymerase sigma factor insig. 47 39
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS01700 RNA polymerase sigma factor insig. 30 55
  Cupriavidus basilensis FW507-4G11 RR42_RS14080 RNA polymerase sigma factor RpoE strong 31 73
  Bacteroides stercoris CC31F HMPREF1181_RS05860 sigma-70 family RNA polymerase sigma factor insig. 32 57
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2617 RNA polymerase sigma factor, sigma-70 family insig. 37 62
  Bacteroides thetaiotaomicron VPI-5482 BT4347 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 30 58
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS04580 sigma-70 family RNA polymerase sigma factor insig. 34 61
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14445 RNA polymerase sigma factor RpoE strong 30 73
  Ralstonia solanacearum GMI1000 RS_RS05225 RNA polymerase sigma factor RpoE strong 30 73
  Ralstonia solanacearum PSI07 RPSI07_RS19015 RNA polymerase sigma factor RpoE strong 30 73
  Ralstonia solanacearum UW163 UW163_RS11910 RNA polymerase sigma factor RpoE insig. 30 73
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11965 RNA polymerase subunit sigma insig. 32 56
  Ralstonia sp. UNC404CL21Col ABZR87_RS10165 RNA polymerase sigma factor RpoE strong 30 73
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS16945 RNA polymerase sigma factor sig. 29 60
  Sinorhizobium meliloti 1021 SM_b20592 RNA polymerase sigma factor insig. 41 39
  Methylophilus sp. DMC18 GFF2730 RNA polymerase sigma-H factor no data 31 58
  Bacteroides ovatus ATCC 8483 BACOVA_05165 Sigma-70 region 2 insig. 30 58
  Phocaeicola dorei CL03T12C01 ABI39_RS12855 RNA polymerase sigma factor insig. 29 60
  Collimonas humicola GW821-FHT01A05 MPMX01_01551 RNA polymerase sigma-H factor no data 31 73
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS19220 sigma-70 family RNA polymerase sigma factor insig. 24 68
  Variovorax sp. OAS795 ABID97_RS08330 RNA polymerase sigma factor RpoE strong 30 70
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_14945 RNA polymerase subunit sigma-24 strong 30 64
  Rhodanobacter denitrificans MT42 LRK55_RS05200 sigma-70 family RNA polymerase sigma factor insig. 30 70
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05425 sigma-70 family RNA polymerase sigma factor insig. 30 70
  Xanthobacter sp. DMC5 GFF1406 RNA polymerase sigma-H factor insig. 34 63
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3635.1 RNA polymerase ECF-type sigma factor insig. 32 54
  Ralstonia sp. UNC404CL21Col ABZR87_RS03700 RNA polymerase sigma factor insig. 32 68
  Burkholderia phytofirmans PsJN BPHYT_RS14405 RNA polymerase sigma factor RpoE no data 31 56
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04355 RNA polymerase, sigma-24 subunit, RpoE no data 31 56
  Paraburkholderia graminis OAS925 ABIE53_003043 RNA polymerase sigma-70 factor (ECF subfamily) strong 31 56
  Paraburkholderia sabiae LMG 24235 QEN71_RS04575 RNA polymerase sigma factor RpoE strong 31 56
  Variovorax sp. SCN45 GFF3863 RNA polymerase sigma factor RpoE insig. 31 61
  Herbaspirillum seropedicae SmR1 HSERO_RS09625 RNA polymerase sigma factor RpoE no data 31 70
  Azospirillum brasilense Sp245 AZOBR_RS31600 RNA polymerase insig. 40 46
  Rhodopseudomonas palustris CGA009 TX73_023085 RNA polymerase sigma factor cofit 38 61
  Kangiella aquimarina DSM 16071 B158DRAFT_2027 RNA polymerase sigma factor, sigma-70 family insig. 27 63
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10790 RNA polymerase sigma factor insig. 36 62
  Mycobacterium tuberculosis H37Rv Rv3223c Alternative RNA polymerase sigma-E factor (sigma-24) SigH (RPOE) insig. 31 49
  Shewanella sp. ANA-3 Shewana3_0763 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 28 61
  Shewanella oneidensis MR-1 SO3840 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) insig. 26 61
  Rhodopseudomonas palustris CGA009 TX73_003315 RNA polymerase sigma factor insig. 32 58
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2774 RNA polymerase sigma factor, sigma-70 family insig. 30 34
  Azospirillum sp. SherDot2 MPMX19_04274 RNA polymerase sigma-H factor insig. 39 47
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS21575 RNA polymerase subunit sigma insig. 32 41
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13165 RNA polymerase sigma factor insig. 29 51
  Dechlorosoma suillum PS Dsui_2453 RNA polymerase sigma factor RpoE no data 29 61
  Pseudomonas simiae WCS417 PS417_11995 RNA polymerase sigma factor insig. 39 49
  Rhodanobacter denitrificans MT42 LRK55_RS07625 RNA polymerase sigma factor insig. 35 47
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07895 RNA polymerase sigma factor insig. 35 47
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07715 RNA polymerase sigma factor no data 33 39
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04360 sigma-70 family RNA polymerase sigma factor insig. 27 61
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15190 RNA polymerase sigma factor insig. 25 60
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS00650 RNA polymerase sigma factor insig. 37 43
  Lysobacter sp. OAE881 ABIE51_RS13890 RNA polymerase sigma factor RpoE strong 31 65
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS04785 sigma-70 family RNA polymerase sigma factor insig. 30 63
  Shewanella loihica PV-4 Shew_2956 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 28 71
  Fusobacterium nucleatum SB010 HUW76_07635 RNA polymerase sigma factor no data 18 56
  Shewanella amazonensis SB2B Sama_2611 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 26 61
  Caulobacter crescentus NA1000 CCNA_02837 RNA polymerase ECF-type sigma factor insig. 36 60
  Caulobacter crescentus NA1000 Δfur CCNA_02837 RNA polymerase ECF-type sigma factor cofit 36 60
  Azospirillum sp. SherDot2 MPMX19_05214 ECF RNA polymerase sigma factor SigE insig. 32 64
  Castellaniella sp019104865 MT123 ABCV34_RS08355 RNA polymerase sigma factor RpoE strong 29 58
  Acidovorax sp. GW101-3H11 Ac3H11_1573 RNA polymerase sigma factor RpoE no data 29 62
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS10060 sigma-70 family RNA polymerase sigma factor insig. 27 79
  Agrobacterium fabrum C58 Atu3084 RNA polymerase sigma factor insig. 33 61
  Pseudomonas stutzeri RCH2 Psest_3456 RNA polymerase sigma factor, sigma-70 family insig. 33 61
  Pseudomonas fluorescens FW300-N2C3 AO356_10740 RNA polymerase subunit sigma insig. 32 58
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07180 RNA polymerase sigma factor RpoE strong 32 55
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3681.1 RNA polymerase sigma factor RpoE insig. 32 61
  Alteromonas macleodii MIT1002 MIT1002_02719 Sigma-24 no data 35 37
  Sphingobium sp. HT1-2 GFF5325 RNA polymerase ECF-type sigma factor cofit 35 49
  Bacteroides stercoris CC31F HMPREF1181_RS11830 sigma-70 family RNA polymerase sigma factor insig. 32 38
  Mycobacterium tuberculosis H37Rv Rv1221 Alternative RNA polymerase sigma factor SigE insig. 32 61
  Xanthobacter sp. DMC5 GFF2972 ECF RNA polymerase sigma factor SigF no data 31 62
  Shewanella amazonensis SB2B Sama_0874 RNA polymerase sigma factor RpoE (RefSeq) strong 33 41
  Pseudomonas syringae pv. syringae B728a Psyr_2096 Sigma-70 region 2 no data 34 40
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2096 Sigma-70 region 2 no data 34 40
  Kangiella aquimarina DSM 16071 B158DRAFT_2180 RNA polymerase, sigma-24 subunit, RpoE strong 33 36
  Bacteroides thetaiotaomicron VPI-5482 BT2044 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 30 55
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS12005 RNA polymerase sigma factor RpoE no data 38 32
  Escherichia coli BL21 ECD_02467 RNA polymerase sigma E factor no data 37 38
  Escherichia fergusonii Becca EFB2_01323 ECF RNA polymerase sigma-E factor no data 37 38
  Escherichia coli ECOR27 NOLOHH_13050 rpoE RNA polymerase sigma factor RpoE no data 37 38
  Escherichia coli ECOR38 HEPCGN_20520 rpoE RNA polymerase sigma factor RpoE no data 37 38
  Escherichia coli ECRC100 OKFHMN_21375 rpoE RNA polymerase sigma factor RpoE no data 37 38
  Escherichia coli ECRC101 MCAODC_11905 rpoE RNA polymerase sigma factor RpoE no data 37 38
  Escherichia coli ECRC102 NIAGMN_19145 rpoE RNA polymerase sigma factor RpoE no data 37 38
  Escherichia coli ECRC62 BNILDI_11850 rpoE RNA polymerase sigma factor RpoE no data 37 38
  Escherichia coli ECRC98 JDDGAC_25040 rpoE RNA polymerase sigma factor RpoE no data 37 38
  Escherichia coli ECRC99 KEDOAH_06845 rpoE RNA polymerase sigma factor RpoE no data 37 38
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01134 ECF RNA polymerase sigma-E factor no data 37 38
  Escherichia coli Nissle 1917 ECOLIN_RS14560 RNA polymerase sigma factor RpoE no data 37 38
  Escherichia coli BW25113 b2573 rpoE RNA polymerase, sigma 24 (sigma E) factor (NCBI) no data 37 38
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4018 RNA polymerase sigma-E factor insig. 31 58
  Pseudomonas sp. BP01 JOY50_RS14665 rpoE RNA polymerase sigma factor RpoE insig. 29 64
  Pseudomonas putida KT2440 PP_1427 RNA polymerase sigma E factor sig. 29 64
  Cellulophaga baltica 18 M666_RS05270 sigma-70 family RNA polymerase sigma factor insig. 24 70
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3339 RNA polymerase sigma factor RpoE cofit 29 59
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19605 RNA polymerase insig. 27 59
  Pseudomonas sp. SVBP6 COO64_RS16525 rpoE RNA polymerase sigma factor RpoE insig. 29 64
  Bacteroides thetaiotaomicron VPI-5482 BT4647 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 28 54
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS18950 sigma-70 family RNA polymerase sigma factor insig. 28 63
  Erwinia amylovora T8 OLJFJH_10215 RNA polymerase sigma factor RpoE strong 36 38
  Pseudomonas segetis P6 ACVTMO_RS06940 rpoE RNA polymerase sigma factor RpoE strong 28 64
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2107 RNA polymerase sigma factor RpoE no data 36 38
  Pseudomonas fluorescens SBW25 PFLU_RS00840 RNA polymerase sigma factor insig. 32 58
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00840 RNA polymerase sigma factor sig. 32 58
  Bacteroides ovatus ATCC 8483 BACOVA_00669 Sigma-70 region 2 insig. 30 62
  Enterobacter asburiae PDN3 EX28DRAFT_0072 RNA polymerase sigma factor RpoE no data 36 38
  Enterobacter sp. TBS_079 MPMX20_03444 ECF RNA polymerase sigma-E factor no data 36 38
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS05140 rpoE RNA polymerase sigma factor RpoE no data 36 38
  Erwinia tracheiphila SCR3 LU632_RS15425 rpoE RNA polymerase sigma factor RpoE strong 35 45
  Rhodanobacter sp. FW510-T8 OKGIIK_14380 RNA polymerase sigma factor insig. 34 43
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2952 RNA polymerase sigma factor, sigma-70 family strong 30 60
  Rhodanobacter sp. FW510-T8 OKGIIK_14780 RNA polymerase subunit sigma-70 insig. 30 61
  Shewanella loihica PV-4 Shew_1231 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 28 66
  Pseudomonas sp. FW215-L2 GFF1028 ECF RNA polymerase sigma-E factor insig. 28 64
  Pseudomonas fluorescens SBW25 PFLU_RS07230 RNA polymerase sigma factor RpoE sig. 28 64
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07230 RNA polymerase sigma factor RpoE strong 28 64
  Pseudomonas sp. DMC3 GFF2277 RNA polymerase sigma-H factor cofit 28 64
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01572 RNA polymerase sigma-H factor cofit 28 64
  Pseudomonas sp. RS175 PFR28_00690 RNA polymerase sigma-H factor strong 28 64
  Pseudomonas orientalis W4I3 QF045_RS09835 RNA polymerase sigma factor RpoE cofit 28 64
  Pseudomonas simiae WCS417 PS417_07120 RNA polymerase sigma-H factor strong 28 64
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4516 RNA polymerase sigma-H factor AlgT sig. 28 64
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3323 RNA polymerase sigma-H factor AlgT no data 28 64
  Pseudomonas fluorescens FW300-N2C3 AO356_04575 RNA polymerase subunit sigma strong 28 64
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2756 RNA polymerase sigma-H factor AlgT strong 28 64
  Pseudomonas sp. S08-1 OH686_20045 RNA polymerase sigma factor RpoE strong 26 64
  Pseudomonas protegens RBAN4 FABNJH_07555 algU alginate biosynthesis protein AlgZ/FimS insig. 35 38
  Pseudomonas simiae WCS417 PS417_00810 RNA polymerase sigma factor insig. 32 58
  Pseudomonas sp. FW215-L2 GFF2295 ECF RNA polymerase sigma factor RpoE insig. 31 58
  Pseudomonas fluorescens FW300-N2E3 AO353_17625 RNA polymerase subunit sigma strong 28 64
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS07350 sigma-70 family RNA polymerase sigma factor insig. 21 64
  Bacteroides stercoris CC31F HMPREF1181_RS08110 sigma-70 family RNA polymerase sigma factor insig. 31 55
  Acidovorax sp. GW101-3H11 Ac3H11_916 RNA polymerase sigma-70 factor insig. 32 54
  Pseudomonas segetis P6 ACVTMO_RS12985 sigX RNA polymerase sigma factor SigX no data 26 64
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19215 RNA polymerase subunit sigma sig. 26 56
  Phocaeicola dorei CL03T12C01 ABI39_RS11710 RNA polymerase sigma factor insig. 26 50
  Bacteroides thetaiotaomicron VPI-5482 BT2492 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 20 55
  Pantoea sp. MT58 IAI47_04850 RNA polymerase sigma factor RpoE no data 34 38
  Rhizobium sp. OAE497 ABIE40_RS20320 sigma-70 family RNA polymerase sigma factor insig. 34 53
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS00445 sigma-70 family RNA polymerase sigma factor insig. 29 63
  Shewanella sp. ANA-3 Shewana3_3032 RNA polymerase sigma factor RpoE (RefSeq) no data 28 63
  Shewanella oneidensis MR-1 SO1342 rpoE RNA polymerase sigma-24 factor (NCBI ptt file) no data 28 63
  Bacteroides stercoris CC31F HMPREF1181_RS04660 sigma-70 family RNA polymerase sigma factor insig. 19 59
  Rhodanobacter denitrificans MT42 LRK55_RS16655 RNA polymerase sigma factor RpoE no data 35 32
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16940 RNA polymerase sigma factor RpoE strong 35 32
  Rhodanobacter denitrificans MT42 LRK55_RS09165 RNA polymerase sigma factor insig. 28 63
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09505 RNA polymerase sigma factor insig. 28 63
  Pseudomonas aeruginosa MRSN321 PFGADD_04374 algU alginate biosynthesis protein AlgZ/FimS strong 26 64
  Pseudomonas aeruginosa PA14 IKLFDK_03265 alginate biosynthesis protein AlgZ/FimS strong 26 64
  Pseudomonas aeruginosa PUPa3 NPBIFN_04430 algU alginate biosynthesis protein AlgZ/FimS strong 26 64
  Rhodanobacter sp. FW510-T8 OKGIIK_07900 rpoE RNA polymerase sigma factor RpoE strong 35 32
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_01235 rpoE RNA polymerase sigma factor RpoE strong 34 38
  Pseudomonas sp. RS175 PFR28_04750 RNA polymerase sigma-H factor insig. 34 44
  Pseudomonas fluorescens SBW25 PFLU_RS12745 RNA polymerase sigma factor insig. 33 62
  Pseudomonas fluorescens SBW25-INTG PFLU_RS12745 RNA polymerase sigma factor insig. 33 62
  Caulobacter crescentus NA1000 CCNA_03362 ECF-family RNA polymerase sigma factor strong 32 49
  Caulobacter crescentus NA1000 Δfur CCNA_03362 ECF-family RNA polymerase sigma factor cofit 32 49
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3183.1 RNA polymerase sigma factor RpoE insig. 31 63
  Shewanella sp. ANA-3 Shewana3_3152 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) cofit 24 67
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0287 RNA polymerase sigma factor, sigma-70 family strong 24 63
  Dickeya dianthicola 67-19 HGI48_RS15850 RNA polymerase sigma factor RpoE cofit 38 32
  Dickeya dianthicola ME23 DZA65_RS16930 RNA polymerase sigma factor RpoE strong 38 32
  Pseudomonas syringae pv. syringae B728a Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE strong 35 38
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE strong 35 38
  Pseudomonas orientalis W4I3 QF045_RS03845 RNA polymerase sigma factor insig. 31 58
  Acidovorax sp. GW101-3H11 Ac3H11_747 RNA polymerase signa E (sigma 24) insig. 29 73
  Rhodanobacter sp. FW510-T8 OKGIIK_14520 rpoE RNA polymerase sigma factor insig. 28 63
  Cellulophaga baltica 18 M666_RS10480 RNA polymerase sigma factor sig. 27 51
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS15730 RNA polymerase sigma factor sig. 25 50
  Alteromonas macleodii MIT1002 MIT1002_00882 Sigma-W factor insig. 25 58
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS10600 RNA polymerase subunit sigma-24 strong 24 51
  Rhodopseudomonas palustris CGA009 TX73_009355 sigma-70 family RNA polymerase sigma factor insig. 35 39
  Serratia liquefaciens MT49 IAI46_19585 RNA polymerase sigma factor RpoE no data 33 38
  Pseudomonas aeruginosa MRSN321 PFGADD_02077 sbrI ECF family RNA polymerase sigma factor SbrI insig. 31 58
  Pseudomonas aeruginosa PA14 IKLFDK_14715 ECF family RNA polymerase sigma factor SbrI insig. 31 58
  Pseudomonas aeruginosa PUPa3 NPBIFN_02116 sbrI ECF family RNA polymerase sigma factor SbrI insig. 31 58
  Sphingobium sp. HT1-2 GFF4485 RNA polymerase sigma factor cnrH cofit 39 35
  Rahnella sp. WP5 EX31_RS21800 RNA polymerase sigma factor RpoE no data 37 32
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09110 RNA polymerase sigma-70 factor sig. 29 41
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19950 RNA polymerase subunit sigma-24 insig. 26 61
  Pectobacterium carotovorum WPP14 HER17_RS05780 RNA polymerase sigma factor RpoE no data 37 32
  Pseudomonas putida KT2440 PP_2088 RNA polymerase sigma factor SigX strong 29 46
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17460 RNA polymerase sigma-70 factor insig. 25 50
  Bosea sp. OAE506 ABIE41_RS02435 sigma-70 family RNA polymerase sigma factor insig. 32 49
  Phocaeicola dorei CL03T12C01 ABI39_RS03415 RNA polymerase sigma-70 factor insig. 28 41
  Shewanella oneidensis MR-1 SO3551 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) insig. 24 67
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1738 RNA polymerase sigma-54 factor RpoN insig. 31 58
  Rahnella sp. WP5 EX31_RS18905 sigma-70 family RNA polymerase sigma factor insig. 30 68
  Cellulophaga baltica 18 M666_RS11420 RNA polymerase sigma factor insig. 30 44
  Rhodopseudomonas palustris CGA009 TX73_024905 sigma-70 family RNA polymerase sigma factor insig. 34 50
  Rhodanobacter sp. FW510-T8 OKGIIK_01380 rpoE RNA polymerase subunit sigma-24 insig. 31 54
  Variovorax sp. OAS795 ABID97_RS16445 sigma-70 family RNA polymerase sigma factor no data 32 51
  Azospirillum brasilense Sp245 AZOBR_RS28490 hypothetical protein sig. 31 63
  Pseudomonas simiae WCS417 PS417_20990 RNA polymerase sigma factor SigX no data 31 40
  Pseudomonas fluorescens SBW25 PFLU_RS22600 RNA polymerase sigma factor SigX strong 31 40
  Pseudomonas fluorescens SBW25-INTG PFLU_RS22600 RNA polymerase sigma factor SigX strong 31 40
  Burkholderia phytofirmans PsJN BPHYT_RS21845 hypothetical protein insig. 43 31
  Dickeya dadantii 3937 DDA3937_RS15765 RNA polymerase sigma factor RpoE strong 38 32
  Cellulophaga baltica 18 M666_RS05355 sigma-70 family RNA polymerase sigma factor insig. 37 23
  Ralstonia sp. UNC404CL21Col ABZR87_RS16160 sigma-70 family RNA polymerase sigma factor insig. 36 49
  Shewanella loihica PV-4 Shew_1048 RNA polymerase sigma factor RpoE (RefSeq) cofit 33 40
  Pseudomonas orientalis W4I3 QF045_RS00535 sigma-70 family RNA polymerase sigma factor cofit 31 61
  Pseudomonas orientalis W4I3 QF045_RS22815 RNA polymerase sigma factor SigX strong 31 40
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00391 RNA polymerase sigma-H factor cofit 30 58
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0443 RNA polymerase sigma factor, sigma-70 family insig. 29 47
  Bacteroides ovatus ATCC 8483 BACOVA_00397 Sigma-70 region 2 sig. 27 33
  Pseudomonas fluorescens FW300-N2E3 AO353_00830 RNA polymerase subunit sigma no data 27 64
  Bacteroides thetaiotaomicron VPI-5482 BT0248 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 26 33
  Pseudomonas protegens RBAN4 FABNJH_00920 RNA polymerase sigma factor insig. 35 44
  Klebsiella michiganensis M5al BWI76_RS21355 RNA polymerase sigma factor RpoE no data 34 38
  Klebsiella pneumoniae MKP103 KDGMDA_28480 RNA polymerase sigma factor RpoE no data 34 38
  Klebsiella pneumoniae MRSN742743 GJGHJB_01209 rpoE RNA polymerase sigma factor RpoE no data 34 38
  Castellaniella sp019104865 MT123 ABCV34_RS11175 sigma-70 family RNA polymerase sigma factor insig. 33 59
  Sphingobium sp. HT1-2 GFF5350 sigma-24 (FecI-like) protein insig. 37 38
  Pseudomonas protegens RBAN4 FABNJH_20920 RNA polymerase sigma factor insig. 36 41
  Bifidobacterium breve UCC2003 BBR_RS15930 RNA polymerase sigma factor insig. 32 65
  Pseudomonas stutzeri RCH2 Psest_3100 RNA polymerase sigma factor RpoE strong 31 38
  Phocaeicola dorei CL03T12C01 ABI39_RS09920 sigma-70 family RNA polymerase sigma factor insig. 27 53
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14290 sigma-70 family RNA polymerase sigma factor insig. 27 53
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4205 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 21 65
  Vibrio cholerae E7946 ATCC 55056 CSW01_12485 RNA polymerase sigma factor RpoE no data 31 36
  Pseudomonas fluorescens FW300-N2C3 AO356_02795 RNA polymerase subunit sigma no data 30 39
  Sphingobium sp. HT1-2 GFF5201 sigma-24 (FecI-like) protein insig. 30 63
  Pseudomonas sp. DMC3 GFF1465 ECF RNA polymerase sigma factor EcfG insig. 30 56
  Pseudomonas sp. SVBP6 COO64_RS05350 sigX RNA polymerase sigma factor SigX no data 30 40
  Bacteroides ovatus ATCC 8483 BACOVA_05174 RNA polymerase sigma-70 factor insig. 29 56
  Pseudomonas aeruginosa MRSN321 PFGADD_03358 sigX RNA polymerase sigma factor SigX no data 25 56
  Pseudomonas aeruginosa PA14 IKLFDK_08585 RNA polymerase sigma factor SigX no data 25 56
  Pseudomonas aeruginosa PUPa3 NPBIFN_03394 sigX RNA polymerase sigma factor SigX no data 25 56
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0865 RNA polymerase sigma factor, sigma-70 family insig. 25 63
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16705 RNA polymerase sigma factor strong 24 58
  Collimonas humicola GW821-FHT01A05 MPMX01_02578 ECF RNA polymerase sigma factor SigF insig. 32 45
  Pseudomonas sp. BP01 JOY50_RS22140 sigX RNA polymerase sigma factor SigX insig. 30 40
  Rhodanobacter sp. FW510-T8 OKGIIK_12575 rpoE RNA polymerase subunit sigma-24 insig. 26 67
  Bacteroides ovatus ATCC 8483 BACOVA_05461 Sigma-70 region 2 cofit 31 38
  Marinobacter adhaerens HP15 HP15_775 RNA polymerase sigma-70 RpoE type insig. 28 63
  Phaeobacter inhibens DSM 17395 PGA1_c08510 RNA polymerase sigma factor (ECF01 subgroup, ECF20 subgroup) insig. 34 66