Homologs of Psyr_1245 from Pseudomonas syringae pv. syringae B728a ΔmexB

23S rRNA m(2)A-2503 methyltransferase
SEED: Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)
KEGG: ribosomal RNA large subunit methyltransferase N

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
o Pseudomonas syringae pv. syringae B728a Psyr_1245 23S rRNA m(2)A-2503 methyltransferase sig. 100 100
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1245 23S rRNA m(2)A-2503 methyltransferase sig. 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS24815 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN cofit 94 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS24815 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN strong 94 100
o Pseudomonas simiae WCS417 PS417_23160 50S rRNA methyltransferase insig. 94 100
o Pseudomonas fluorescens FW300-N2E3 AO353_15875 23S rRNA (adenine(2503)-C2)-methyltransferase strong 93 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_857 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) no data 94 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4865 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) insig. 95 98
o Pseudomonas fluorescens FW300-N2C3 AO356_06605 23S rRNA (adenine(2503)-C2)-methyltransferase insig. 94 98
o Pseudomonas sp. RS175 PFR28_00294 Dual-specificity RNA methyltransferase RlmN insig. 93 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3181 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) no data 94 98
o Pseudomonas stutzeri RCH2 Psest_1259 23S rRNA m2A2503 methyltransferase strong 86 100
o Pseudomonas putida KT2440 PP_0850 Dual-specificity RNA methyltransferase RlmN sig. 86 98
o Pseudomonas sp. S08-1 OH686_17515 23S rRNA (adenine(2503)-C(2))-methyltransferase cofit 84 97
o Marinobacter adhaerens HP15 HP15_1490 conserved hypothetical protein strong 68 97
o Acinetobacter radioresistens SK82 MPMX26_00426 Dual-specificity RNA methyltransferase RlmN cofit 62 93
o Kangiella aquimarina DSM 16071 B158DRAFT_1149 23S rRNA m2A2503 methyltransferase insig. 61 93
o Rahnella sp. WP5 EX31_RS20525 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN insig. 59 94
o Escherichia coli ECRC100 OKFHMN_21710 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN cofit 60 93
o Escherichia coli ECRC101 MCAODC_12240 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN cofit 60 93
o Escherichia coli ECRC102 NIAGMN_19480 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN insig. 60 93
o Escherichia coli ECRC98 JDDGAC_25385 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN cofit 60 93
o Escherichia coli ECRC99 KEDOAH_06510 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN no data 60 93
o Escherichia coli BL21 ECD_02409 dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM-dependent strong 60 93
o Escherichia fergusonii Becca EFB2_01373 Dual-specificity RNA methyltransferase RlmN insig. 60 93
o Escherichia coli ECOR27 NOLOHH_13360 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN insig. 60 93
o Escherichia coli ECOR38 HEPCGN_20830 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN cofit 60 93
o Escherichia coli ECRC62 BNILDI_12160 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN cofit 60 93
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01192 Dual-specificity RNA methyltransferase RlmN sig. 60 93
o Escherichia coli Nissle 1917 ECOLIN_RS14300 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN cofit 60 93
o Escherichia coli BW25113 b2517 yfgB predicted enzyme (NCBI) strong 60 93
o Enterobacter asburiae PDN3 EX28DRAFT_0126 23S rRNA (adenine(2503)-C(2))-methyltransferase cofit 60 93
o Erwinia tracheiphila SCR3 LU632_RS17815 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN insig. 60 94
o Enterobacter sp. TBS_079 MPMX20_03395 Dual-specificity RNA methyltransferase RlmN insig. 60 93
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2414 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) cofit 60 93
o Pectobacterium carotovorum WPP14 HER17_RS06085 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN cofit 59 93
o Dickeya dadantii 3937 DDA3937_RS15480 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN cofit 59 93
o Klebsiella michiganensis M5al BWI76_RS21095 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN sig. 60 93
o Serratia liquefaciens MT49 IAI46_19290 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN insig. 58 93
o Ralstonia solanacearum PSI07 RPSI07_RS18115 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN insig. 59 92
o Dickeya dianthicola ME23 DZA65_RS16665 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN insig. 59 93
o Dickeya dianthicola 67-19 HGI48_RS15590 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN insig. 59 93
o Ralstonia solanacearum GMI1000 RS_RS06070 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN insig. 59 92
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS15260 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN no data 59 92
o Ralstonia solanacearum UW163 UW163_RS12725 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN no data 59 92
o Cupriavidus basilensis FW507-4G11 RR42_RS13155 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN no data 58 92
o Ralstonia sp. UNC404CL21Col ABZR87_RS10900 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN strong 58 92
o Lysobacter sp. OAE881 ABIE51_RS09415 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN cofit 56 95
o Pantoea sp. MT58 IAI47_05040 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN insig. 59 93
o Shewanella sp. ANA-3 Shewana3_1226 hypothetical protein (RefSeq) strong 58 93
o Shewanella oneidensis MR-1 SO3315 conserved hypothetical protein TIGR00048 (NCBI ptt file) sig. 57 93
o Vibrio cholerae E7946 ATCC 55056 CSW01_03930 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN insig. 58 93
o Dechlorosoma suillum PS Dsui_3145 23S rRNA m2A2503 methyltransferase no data 56 94
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2737.1 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) insig. 56 98
o Rhodanobacter denitrificans MT42 LRK55_RS18065 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN cofit 56 94
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS00070 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN sig. 56 94
o Shewanella amazonensis SB2B Sama_2368 hypothetical protein (RefSeq) sig. 57 93
o Shewanella loihica PV-4 Shew_1287 hypothetical protein (RefSeq) strong 56 93
o Paraburkholderia sabiae LMG 24235 QEN71_RS05965 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN cofit 55 94
o Rhodanobacter sp. FW510-T8 OKGIIK_07140 rlmN 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN insig. 56 93
o Herbaspirillum seropedicae SmR1 HSERO_RS14810 50S rRNA methyltransferase no data 55 94
o Burkholderia phytofirmans PsJN BPHYT_RS12590 dual-specificity RNA methyltransferase RlmN insig. 55 94
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00514 23S rRNA m(2)A-2503 methyltransferase no data 55 94
o Paraburkholderia graminis OAS925 ABIE53_002744 23S rRNA (adenine2503-C2)-methyltransferase sig. 54 94
o Acidovorax sp. GW101-3H11 Ac3H11_1791 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) insig. 55 95
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS05455 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN sig. 55 95
o Alteromonas macleodii MIT1002 MIT1002_02791 Dual-specificity RNA methyltransferase RlmN cofit 55 92
o Castellaniella sp019104865 MT123 ABCV34_RS02610 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN cofit 52 92
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4866 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) cofit 51 95
o Variovorax sp. SCN45 GFF992 23S rRNA (adenine(2503)-C(2))-methyltransferase @ tRNA (adenine(37)-C(2))-methyltransferase (EC 2.1.1.192) cofit 52 92
o Variovorax sp. OAS795 ABID97_RS14210 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN strong 51 95
o Azospirillum brasilense Sp245 AZOBR_RS00800 50S rRNA methyltransferase insig. 50 98
o Azospirillum sp. SherDot2 MPMX19_02413 Dual-specificity RNA methyltransferase RlmN insig. 50 98
o Agrobacterium fabrum C58 Atu2673 hypothetical protein sig. 49 93
  Rhodospirillum rubrum S1H Rru_A3329 hypothetical protein (NCBI) cofit 49 89
o Phaeobacter inhibens DSM 17395 PGA1_c36240 ribosomal RNA large subunit methyltransferase N insig. 47 97
o Sinorhizobium meliloti 1021 SMc03831 hypothetical protein sig. 47 96
o Magnetospirillum magneticum AMB-1 AMB_RS05715 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN insig. 49 90
o Rhodopseudomonas palustris CGA009 TX73_002060 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN insig. 49 90
o Dinoroseobacter shibae DFL-12 Dshi_3311 radical SAM enzyme, Cfr family (RefSeq) sig. 48 94
o Rhizobium sp. OAE497 ABIE40_RS18200 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN insig. 47 93
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS12865 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN insig. 47 91
o Caulobacter crescentus NA1000 CCNA_00133 radical SAM family enzyme strong 46 96
o Caulobacter crescentus NA1000 Δfur CCNA_00133 radical SAM family enzyme insig. 46 96
o Bosea sp. OAE506 ABIE41_RS04880 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN insig. 45 97
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1407 23S rRNA (adenine(2503)-C(2))-methyltransferase insig. 45 90
o Desulfovibrio vulgaris Miyazaki F DvMF_1431 radical SAM enzyme, Cfr family (RefSeq) sig. 41 89
o Desulfovibrio vulgaris Hildenborough JW710 DVU2904 radical SAM enzyme, Cfr family (TIGR) insig. 40 91
o Synechococcus elongatus PCC 7942 Synpcc7942_1758 hypothetical protein strong 38 90
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_15910 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN strong 39 90
o Phocaeicola dorei CL03T12C01 ABI39_RS12945 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN strong 38 90
  Variovorax sp. SCN45 GFF7791 23S rRNA (adenine(2503)-C(2))-methyltransferase @ tRNA (adenine(37)-C(2))-methyltransferase (EC 2.1.1.192) no data 62 49
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0755 23S rRNA m2A2503 methyltransferase sig. 39 90
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17025 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN strong 38 90
o Bacteroides ovatus ATCC 8483 BACOVA_05204 23S rRNA m2A2503 methyltransferase sig. 40 90
o Bacteroides stercoris CC31F HMPREF1181_RS05775 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN sig. 41 90
o Bacteroides thetaiotaomicron VPI-5482 BT4372 conserved hypothetical protein (NCBI ptt file) strong 39 90
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00655 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN insig. 36 91
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19115 23S rRNA (adenine(2503)-C(2))-methyltransferase insig. 36 91
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS14530 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN insig. 38 90