Homologs of Pf1N1B4_629 from Pseudomonas fluorescens FW300-N1B4

Queuosine Biosynthesis QueE Radical SAM
SEED: Queuosine Biosynthesis QueE Radical SAM
KEGG: queuosine biosynthesis protein QueE

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_629 Queuosine Biosynthesis QueE Radical SAM insig. 100 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1861 Queuosine Biosynthesis QueE Radical SAM insig. 97 100
o Pseudomonas fluorescens FW300-N2C3 AO356_18065 7-carboxy-7-deazaguanine synthase insig. 97 100
o Pseudomonas fluorescens SBW25 PFLU_RS24045 7-carboxy-7-deazaguanine synthase QueE insig. 97 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS24045 7-carboxy-7-deazaguanine synthase QueE sig. 97 100
o Pseudomonas sp. RS175 PFR28_03404 7-carboxy-7-deazaguanine synthase sig. 96 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5545 Queuosine Biosynthesis QueE Radical SAM strong 96 100
o Pseudomonas simiae WCS417 PS417_22405 7-carboxy-7-deazaguanine synthase sig. 96 100
o Pseudomonas fluorescens FW300-N2E3 AO353_03540 7-carboxy-7-deazaguanine synthase insig. 95 100
o Pseudomonas syringae pv. syringae B728a Psyr_1418 Radical SAM insig. 90 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1418 Radical SAM no data 90 100
o Pseudomonas putida KT2440 PP_1225 7-carboxy-7-deazaguanine synthase sig. 89 100
o Pseudomonas stutzeri RCH2 Psest_1505 Organic radical activating enzymes sig. 82 98
o Pseudomonas sp. S08-1 OH686_19175 7-carboxy-7-deazaguanine synthase cofit 79 100
o Lysobacter sp. OAE881 ABIE51_RS05100 7-carboxy-7-deazaguanine synthase QueE insig. 68 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1449.1 Queuosine Biosynthesis QueE Radical SAM insig. 65 98
o Acinetobacter radioresistens SK82 MPMX26_02174 7-carboxy-7-deazaguanine synthase strong 60 98
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS10790 7-carboxy-7-deazaguanine synthase QueE insig. 60 99
o Dechlorosoma suillum PS Dsui_0476 organic radical activating enzyme insig. 61 99
o Rhodanobacter sp. FW510-T8 OKGIIK_01890 7-carboxy-7-deazaguanine synthase insig. 58 100
o Rhodanobacter denitrificans MT42 LRK55_RS04640 7-carboxy-7-deazaguanine synthase QueE cofit 57 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS04860 7-carboxy-7-deazaguanine synthase QueE strong 57 100
o Kangiella aquimarina DSM 16071 B158DRAFT_1144 Organic radical activating enzymes cofit 57 98
  Azospirillum brasilense Sp245 AZOBR_RS04155 radical SAM protein insig. 42 56
  Paraburkholderia graminis OAS925 ABIE53_000397 7-carboxy-7-deazaguanine synthase strong 30 95
  Burkholderia phytofirmans PsJN BPHYT_RS01505 7-cyano-7-deazaguanine reductase sig. 30 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02231 7-carboxy-7-deazaguanine synthase, Cx14CxxC type cofit 29 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS00205 7-carboxy-7-deazaguanine synthase insig. 28 95
o Shewanella loihica PV-4 Shew_2061 radical SAM domain-containing protein (RefSeq) insig. 30 94
o Pantoea sp. MT58 IAI47_04140 7-carboxy-7-deazaguanine synthase QueE insig. 30 94
o Phaeobacter inhibens DSM 17395 PGA1_c05620 putative 7-cyano-7-deazaguanosine biosynthesis protein QueE insig. 32 98
o Pectobacterium carotovorum WPP14 HER17_RS04200 7-carboxy-7-deazaguanine synthase QueE insig. 30 94
  Phocaeicola dorei CL03T12C01 ABI39_RS10600 radical SAM protein insig. 31 94
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14880 radical SAM protein insig. 32 94
o Rahnella sp. WP5 EX31_RS07920 7-carboxy-7-deazaguanine synthase QueE insig. 30 94
  Bacteroides thetaiotaomicron VPI-5482 BT4454 conserved hypothetical protein (NCBI ptt file) insig. 41 46
o Erwinia tracheiphila SCR3 LU632_RS06390 queE 7-carboxy-7-deazaguanine synthase QueE insig. 28 94
o Dickeya dadantii 3937 DDA3937_RS16970 7-carboxy-7-deazaguanine synthase QueE insig. 28 94
  Rhodospirillum rubrum S1H Rru_A1959 Radical SAM (NCBI) insig. 37 70
  Herbaspirillum seropedicae SmR1 HSERO_RS11035 7-cyano-7-deazaguanine reductase sig. 35 48
o Serratia liquefaciens MT49 IAI46_03675 7-carboxy-7-deazaguanine synthase QueE insig. 29 94
  Bacteroides ovatus ATCC 8483 BACOVA_05261 radical SAM domain protein insig. 40 48
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4642 Organic radical activating enzymes sig. 26 95
  Magnetospirillum magneticum AMB-1 AMB_RS18645 7-carboxy-7-deazaguanine synthase cofit 34 54
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00750 radical SAM protein insig. 40 46
o Enterobacter asburiae PDN3 EX28DRAFT_2855 putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE insig. 28 94
o Enterobacter sp. TBS_079 MPMX20_03645 7-carboxy-7-deazaguanine synthase sig. 28 94
  Cupriavidus basilensis FW507-4G11 RR42_RS11390 7-cyano-7-deazaguanine reductase no data 30 70
o Escherichia fergusonii Becca EFB2_01141 7-carboxy-7-deazaguanine synthase insig. 27 94
o Escherichia coli ECOR38 HEPCGN_19205 queE 7-carboxy-7-deazaguanine synthase QueE cofit 27 94
o Escherichia coli Nissle 1917 ECOLIN_RS15475 7-carboxy-7-deazaguanine synthase QueE no data 27 94
o Klebsiella michiganensis M5al BWI76_RS22780 7-carboxy-7-deazaguanine synthase QueE insig. 27 94
o Dickeya dianthicola 67-19 HGI48_RS17035 7-carboxy-7-deazaguanine synthase QueE insig. 28 94
o Dickeya dianthicola ME23 DZA65_RS18110 7-carboxy-7-deazaguanine synthase QueE insig. 28 94
o Escherichia coli BL21 ECD_02622 7-carboxy-7-deazaguanine synthase; queosine biosynthesis insig. 27 94
o Escherichia coli ECRC101 OKFHMN_20300 queE 7-carboxy-7-deazaguanine synthase QueE insig. 27 94
o Escherichia coli ECRC101 MCAODC_10825 queE 7-carboxy-7-deazaguanine synthase QueE insig. 27 94
o Escherichia coli ECRC102 NIAGMN_18070 queE 7-carboxy-7-deazaguanine synthase QueE insig. 27 94
o Escherichia coli ECRC98 JDDGAC_23965 queE 7-carboxy-7-deazaguanine synthase QueE no data 27 94
o Escherichia coli ECRC99 KEDOAH_07830 queE 7-carboxy-7-deazaguanine synthase QueE no data 27 94
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00957 7-carboxy-7-deazaguanine synthase insig. 27 94
o Escherichia coli BW25113 b2777 ygcF hypothetical protein (NCBI) insig. 27 94
o Shewanella sp. ANA-3 Shewana3_2163 radical activating enzyme (RefSeq) insig. 28 94
o Escherichia coli ECRC62 BNILDI_10675 queE 7-carboxy-7-deazaguanine synthase QueE insig. 27 94
o Alteromonas macleodii MIT1002 MIT1002_01264 7-carboxy-7-deazaguanine synthase strong 28 96
o Escherichia coli ECOR27 NOLOHH_12170 queE 7-carboxy-7-deazaguanine synthase QueE cofit 27 94
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4831 Queuosine Biosynthesis QueE Radical SAM insig. 27 94
o Shewanella amazonensis SB2B Sama_1825 radical activating enzyme (RefSeq) insig. 27 94
o Shewanella oneidensis MR-1 SO2501 radical activating enzyme (NCBI ptt file) insig. 27 94
  Ralstonia solanacearum GMI1000 RS_RS07295 7-carboxy-7-deazaguanine synthase sig. 37 48
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07135 7-carboxy-7-deazaguanine synthase QueE strong 27 95
  Ralstonia sp. UNC404CL21Col ABZR87_RS12145 7-carboxy-7-deazaguanine synthase strong 30 70
  Bacteroides stercoris CC31F HMPREF1181_RS07295 radical SAM protein insig. 36 46
  Bacteroides stercoris CC31F HMPREF1181_RS13885 radical SAM protein insig. 44 33
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS09380 7-carboxy-7-deazaguanine synthase QueE insig. 29 95
o Sinorhizobium meliloti 1021 SM_b20938 hypothetical protein insig. 28 99
  Marinobacter adhaerens HP15 HP15_3815 organic radical activating enzyme strong 36 46
  Magnetospirillum magneticum AMB-1 AMB_RS01255 7-carboxy-7-deazaguanine synthase insig. 37 47
  Ralstonia solanacearum PSI07 RPSI07_RS16890 7-carboxy-7-deazaguanine synthase no data 36 48
o Agrobacterium fabrum C58 Atu3344 radical activating protein insig. 36 48
o Synechococcus elongatus PCC 7942 Synpcc7942_1332 hypothetical protein strong 27 95
  Rhodopseudomonas palustris CGA009 TX73_006110 7-carboxy-7-deazaguanine synthase insig. 35 46
  Variovorax sp. SCN45 GFF2577 7-carboxy-7-deazaguanine synthase (EC 4.3.99.3) no data 33 46
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS00615 7-carboxy-7-deazaguanine synthase no data 35 48
  Ralstonia solanacearum UW163 UW163_RS13945 7-carboxy-7-deazaguanine synthase no data 35 48
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4633 Queuosine Biosynthesis QueE Radical SAM insig. 33 47
  Acidovorax sp. GW101-3H11 Ac3H11_3825 Queuosine Biosynthesis QueE Radical SAM no data 35 47
o Vibrio cholerae E7946 ATCC 55056 CSW01_06870 7-carboxy-7-deazaguanine synthase QueE insig. 25 94
  Variovorax sp. OAS795 ABID97_RS07425 7-carboxy-7-deazaguanine synthase no data 32 47
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS08930 7-carboxy-7-deazaguanine synthase QueE strong 29 71
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3210 Organic radical activating enzymes insig. 30 70
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08695 7-carboxy-7-deazaguanine synthase no data 34 47
  Paraburkholderia sabiae LMG 24235 QEN71_RS41925 7-carboxy-7-deazaguanine synthase QueE insig. 28 72
  Desulfovibrio vulgaris Hildenborough JW710 DVU2658 conserved hypothetical protein (TIGR) sig. 29 95
  Caulobacter crescentus NA1000 CCNA_03261 queuosine biosynthesis protein QueE strong 31 49
  Caulobacter crescentus NA1000 Δfur CCNA_03261 queuosine biosynthesis protein QueE cofit 31 49
  Desulfovibrio vulgaris Miyazaki F DvMF_1124 radical SAM domain protein (RefSeq) insig. 30 65
o Methanococcus maripaludis JJ MMJJ_RS05040 7-carboxy-7-deazaguanine synthase QueE strong 27 91
o Methanococcus maripaludis S2 MMP_RS00445 7-carboxy-7-deazaguanine synthase QueE insig. 27 91
  Bacteroides thetaiotaomicron VPI-5482 BT4737 pyruvate formate-lyase activating enzyme (NCBI ptt file) strong 31 58