Homologs of PP_0540 from Pseudomonas putida KT2440

conserved inner membrane protein
SEED: DedA protein
KEGG: membrane-associated protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_0540 conserved inner membrane protein strong 100 100
o Pseudomonas sp. BP01 JOY50_RS23040 DedA family protein insig. 98 100
o Pseudomonas sp. SVBP6 COO64_RS15720 DedA family protein insig. 90 100
o Pseudomonas aeruginosa MRSN321 DY961_RS27610 DedA family protein strong 80 97
o Pseudomonas aeruginosa PA14 IKLFDK_20775 DedA family protein strong 80 97
o Pseudomonas aeruginosa PUPa3 DQ20_RS48035 DedA family protein strong 80 97
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05122 Protein DedA cofit 86 100
o Pseudomonas fluorescens SBW25 PFLU_RS26770 DedA family protein strong 86 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS26770 DedA family protein strong 86 100
o Pseudomonas simiae WCS417 PS417_24835 hypothetical protein strong 87 100
o Pseudomonas orientalis W4I3 QF045_RS27120 DedA family protein no data 86 100
o Pseudomonas sp. DMC3 GFF3853 Protein DedA cofit 84 100
o Pseudomonas fluorescens FW300-N2E3 AO353_06585 hypothetical protein strong 83 100
o Pseudomonas sp. RS175 PFR28_03891 Protein DedA strong 83 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4974 DedA protein strong 80 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1337 DedA protein strong 82 100
o Pseudomonas fluorescens FW300-N2C3 AO356_15200 hypothetical protein strong 82 100
o Pseudomonas syringae pv. syringae B728a Psyr_0626 DedA strong 78 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0626 DedA strong 78 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2668 DedA protein strong 81 84
o Erwinia tracheiphila SCR3 LU632_RS07830 DedA family protein sig. 57 97
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1933 DedA protein strong 55 97
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_17880 DedA family protein insig. 56 97
o Enterobacter sp. TBS_079 MPMX20_03252 Protein DedA strong 55 97
o Escherichia fergusonii Becca EFB2_01541 Protein DedA cofit 57 93
o Escherichia coli Nissle 1917 ECOLIN_RS13430 DedA family protein insig. 57 93
o Klebsiella pneumoniae MKP103 KDGMDA_27210 DedA family protein strong 55 97
o Enterobacter asburiae PDN3 EX28DRAFT_0287 Uncharacterized membrane-associated protein insig. 55 97
o Escherichia coli BL21 ECD_02242 DedA family inner membrane protein strong 56 93
o Escherichia coli ECOR27 NOLOHH_14310 Protein DedA strong 56 93
o Escherichia coli ECRC100 OKFHMN_22675 Protein DedA strong 56 93
o Escherichia coli ECRC101 MCAODC_13715 Protein DedA strong 56 93
o Escherichia coli ECRC102 NIAGMN_20450 Protein DedA strong 56 93
o Escherichia coli ECRC98 JDDGAC_26635 Protein DedA strong 56 93
o Escherichia coli ECRC99 KEDOAH_05520 Protein DedA no data 56 93
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01388 Protein DedA sig. 56 93
o Escherichia coli BW25113 b2317 dedA conserved inner membrane protein (NCBI) strong 56 93
o Rahnella sp. WP5 EX31_RS19595 DedA family protein insig. 56 94
o Escherichia coli ECOR38 HEPCGN_21880 DedA family inner membrane protein strong 57 93
o Klebsiella michiganensis M5al BWI76_RS20375 membrane protein sig. 55 97
o Escherichia coli ECRC62 BNILDI_13230 DedA family inner membrane protein strong 57 93
o Dickeya dadantii 3937 DDA3937_RS14460 DedA family protein insig. 55 99
o Bacteroides ovatus ATCC 8483 BACOVA_05451 SNARE-like domain protein strong 54 97
o Serratia liquefaciens MT49 IAI46_17835 DedA family protein cofit 55 94
o Dickeya dianthicola 67-19 HGI48_RS14430 DedA family protein insig. 54 99
o Erwinia amylovora T8 OLJFJH_11245 DedA family protein sig. 56 97
o Pseudomonas sp. S08-1 OH686_14535 DedA protein strong 55 97
o Dickeya dianthicola ME23 DZA65_RS15365 DedA family protein insig. 53 99
o Pantoea sp. MT58 IAI47_06250 DedA family protein sig. 57 98
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS00205 DedA family protein cofit 57 98
o Phocaeicola dorei CL03T12C01 ABI39_RS13800 DedA family protein insig. 52 94
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17605 DedA family protein insig. 52 94
o Desulfovibrio vulgaris Hildenborough JW710 DVU2682 DedA family protein (TIGR) strong 53 95
o Acinetobacter radioresistens SK82 MPMX26_00073 Protein DedA strong 55 94
o Herbaspirillum seropedicae SmR1 HSERO_RS17220 membrane protein insig. 54 94
o Variovorax sp. OAS795 ABID97_RS20305 DedA family protein no data 50 98
o Bacteroides thetaiotaomicron VPI-5482 BT4639 conserved hypothetical protein, putative membrane protein (NCBI ptt file) sig. 53 96
o Acidovorax sp. GW101-3H11 Ac3H11_312 DedA protein no data 50 96
o Cupriavidus basilensis FW507-4G11 RR42_RS17200 membrane protein no data 54 93
o Variovorax sp. SCN45 GFF4801 DedA protein insig. 50 97
o Desulfovibrio vulgaris Miyazaki F DvMF_1142 SNARE associated Golgi protein (RefSeq) insig. 52 96
  Herbaspirillum seropedicae SmR1 HSERO_RS04205 membrane protein sig. 52 94
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04713 membrane-associated protein strong 52 96
o Paraburkholderia graminis OAS925 ABIE53_000878 membrane-associated protein strong 52 96
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5484 DedA protein no data 48 98
o Dechlorosoma suillum PS Dsui_1547 putative membrane-associated protein no data 56 96
o Castellaniella sp019104865 MT123 ABCV34_RS08780 VTT domain-containing protein strong 54 86
o Ralstonia solanacearum PSI07 RPSI07_RS12090 membrane protein strong 48 97
o Burkholderia phytofirmans PsJN BPHYT_RS03655 membrane protein insig. 52 93
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS05210 membrane protein insig. 48 97
o Ralstonia solanacearum UW163 UW163_RS08415 membrane protein insig. 48 97
o Ralstonia solanacearum GMI1000 RS_RS12830 membrane protein strong 48 95
o Ralstonia sp. UNC404CL21Col ABZR87_RS00865 VTT domain-containing protein strong 49 97
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_09550 hypothetical protein sig. 55 95
o Paraburkholderia sabiae LMG 24235 QEN71_RS26430 DedA family protein cofit 54 93
o Acinetobacter baumannii LAC-4 RR41_RS18275 DedA family protein cofit 54 98
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS01745 DedA family protein no data 43 94
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS03315 hypothetical protein no data 45 94
  Cupriavidus basilensis FW507-4G11 RR42_RS27985 membrane protein insig. 46 85
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03331 membrane-associated protein insig. 41 86
  Burkholderia phytofirmans PsJN BPHYT_RS28790 membrane protein insig. 42 85
  Acinetobacter baumannii LAC-4 RR41_RS00030 VTT domain-containing protein insig. 45 80
  Bifidobacterium breve UCC2003 BBR_RS10940 DedA family protein strong 42 84
  Mycobacterium tuberculosis H37Rv Rv0364 Possible conserved transmembrane protein no data 41 81
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17100 DedA family protein strong 39 84
  Acinetobacter radioresistens SK82 MPMX26_02914 Protein DedA cofit 42 82
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS23605 alkaline phosphatase strong 39 84
  Pantoea sp. MT58 IAI47_03210 DedA family protein insig. 40 82
  Rahnella sp. WP5 EX31_RS08030 DedA family protein insig. 37 84
  Dickeya dadantii 3937 DDA3937_RS01810 DedA family protein cofit 37 83
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16485 DedA family protein insig. 40 82
  Erwinia tracheiphila SCR3 LU632_RS20550 DedA family protein sig. 38 83
  Dickeya dianthicola 67-19 HGI48_RS01705 DedA family protein insig. 37 83
  Dickeya dianthicola ME23 DZA65_RS01780 DedA family protein insig. 37 83
  Serratia liquefaciens MT49 IAI46_21730 DedA family protein insig. 38 76
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_14520 DedA family protein insig. 38 83
  Pectobacterium carotovorum WPP14 HER17_RS19695 DedA family protein cofit 39 73
  Pectobacterium carotovorum WPP14 HER17_RS18730 DedA family protein cofit 34 97
  Escherichia coli BL21 ECD_02882 general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter strong 36 79
  Escherichia fergusonii Becca EFB2_00801 Inner membrane protein YghB strong 36 79