Homologs of MMP_RS07180 from Methanococcus maripaludis S2

DEAD/DEAH box helicase
SEED: Putative ATP-dependent RNA helicase MJ1505 (EC 3.6.1.-)
KEGG: fanconi anemia group M protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Methanococcus maripaludis S2 MMP_RS07180 DEAD/DEAH box helicase sig. 100 100
o Methanococcus maripaludis JJ MMJJ_RS07175 DEAD/DEAH box helicase cofit 96 100
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1599 Superfamily II DNA and RNA helicases insig. 28 17
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14945 helicase insig. 31 21
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS09685 DEAD/DEAH box helicase insig. 33 16
  Bacteroides ovatus ATCC 8483 BACOVA_04028 DEAD/DEAH box helicase insig. 30 14
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS04305 DEAD/DEAH box helicase sig. 28 15
  Phocaeicola dorei CL03T12C01 ABI39_RS16900 DEAD/DEAH box helicase insig. 26 19
  Bacteroides thetaiotaomicron VPI-5482 BT1154 ATP-independent RNA helicase (NCBI ptt file) sig. 29 14
  Shewanella oneidensis MR-1 SO0947 srmB ATP-dependent RNA helicase SrmB (NCBI ptt file) strong 27 23
  Acinetobacter radioresistens SK82 MPMX26_01113 ATP-dependent RNA helicase RhlB cofit 29 18
  Shewanella amazonensis SB2B Sama_2742 ATP-dependent RNA helicase SrmB (RefSeq) cofit 27 20
  Shewanella sp. ANA-3 Shewana3_3336 ATP-dependent RNA helicase SrmB (RefSeq) strong 27 23
  Bacteroides stercoris CC31F HMPREF1181_RS16875 DEAD/DEAH box helicase insig. 30 16
  Bifidobacterium breve UCC2003 BBR_RS10690 DUF3427 domain-containing protein cofit 29 20
  Pseudomonas segetis P6 ACVTMO_RS09785 SNF2-related protein insig. 26 28
  Pseudomonas aeruginosa PUPa3 DQ20_RS34555 SNF2-related protein strong 26 28
  Bifidobacterium breve UCC2003 BBR_RS14880 ATP-dependent helicase sig. 25 27
  Mycobacterium tuberculosis H37Rv Rv3211 Probable ATP-dependent RNA helicase RhlE no data 31 16
  Cellulophaga baltica 18 M666_RS16760 DEAD/DEAH box helicase insig. 27 15
  Pseudomonas aeruginosa MRSN321 DY961_RS22265 dbpA;go_function=nucleic ATP-dependent RNA helicase DbpA insig. 29 20
  Pseudomonas aeruginosa PA14 IKLFDK_23155 ATP-dependent RNA helicase DbpA insig. 29 20
  Pseudomonas aeruginosa PUPa3 DQ20_RS37055 dbpA;go_function=nucleic ATP-dependent RNA helicase DbpA sig. 29 20
  Bacteroides thetaiotaomicron VPI-5482 BT3924 ATP-dependent DNA helicase recG (NCBI ptt file) no data 30 19
  Shewanella sp. ANA-3 Shewana3_1162 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 29 20
  Enterobacter sp. TBS_079 MPMX20_03447 ATP-dependent RNA helicase SrmB strong 26 20
  Rhodanobacter denitrificans MT42 LRK55_RS17115 DEAD/DEAH box helicase insig. 22 58
  Shewanella oneidensis MR-1 SO3388 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 29 20
  Phaeobacter inhibens DSM 17395 PGA1_c11390 putative ATP-dependent RNA helicase RhlE sig. 32 15
  Shewanella loihica PV-4 Shew_0767 ATP-dependent RNA helicase SrmB (RefSeq) strong 30 17
  Dickeya dianthicola 67-19 HGI48_RS11065 ATP-dependent RNA helicase DbpA insig. 29 20
  Dickeya dianthicola ME23 DZA65_RS11470 ATP-dependent RNA helicase DbpA insig. 29 20
  Enterobacter asburiae PDN3 EX28DRAFT_0069 Superfamily II DNA and RNA helicases insig. 26 20
  Dickeya dadantii 3937 DDA3937_RS11045 ATP-dependent RNA helicase DbpA insig. 29 20
  Shewanella oneidensis MR-1 SO3125 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 27 19
  Shewanella oneidensis MR-1 SO1501 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 23 34
  Paraburkholderia sabiae LMG 24235 QEN71_RS02265 DEAD/DEAH box helicase strong 29 17
  Pseudomonas segetis P6 ACVTMO_RS03355 dbpA ATP-dependent RNA helicase DbpA insig. 29 22
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3407 Superfamily II DNA and RNA helicases insig. 28 18
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_18930 RNA helicase strong 29 22
  Escherichia coli BL21 ECD_02470 ATP-dependent RNA helicase strong 30 17
  Escherichia fergusonii Becca EFB2_01320 ATP-dependent RNA helicase SrmB strong 30 17
  Escherichia coli ECOR27 NOLOHH_13035 srmB ATP-dependent RNA helicase SrmB strong 30 17
  Escherichia coli ECOR38 HEPCGN_20505 srmB ATP-dependent RNA helicase SrmB strong 30 17
  Escherichia coli ECRC100 OKFHMN_21360 srmB ATP-dependent RNA helicase SrmB cofit 30 17
  Escherichia coli ECRC101 MCAODC_11890 srmB ATP-dependent RNA helicase SrmB strong 30 17
  Escherichia coli ECRC102 NIAGMN_19130 srmB ATP-dependent RNA helicase SrmB cofit 30 17
  Escherichia coli ECRC62 BNILDI_11835 srmB ATP-dependent RNA helicase SrmB cofit 30 17
  Escherichia coli ECRC98 JDDGAC_25025 srmB ATP-dependent RNA helicase SrmB strong 30 17
  Escherichia coli ECRC99 KEDOAH_06860 srmB ATP-dependent RNA helicase SrmB no data 30 17
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01131 ATP-dependent RNA helicase SrmB strong 30 17
  Escherichia coli Nissle 1917 ECOLIN_RS14580 ATP-dependent RNA helicase SrmB sig. 30 17
  Escherichia coli BW25113 b2576 srmB ATP-dependent RNA helicase (NCBI) strong 30 17
  Alteromonas macleodii MIT1002 MIT1002_01999 ATP-dependent RNA helicase SrmB no data 28 14
  Pseudomonas aeruginosa MRSN321 DY961_RS22125 DEAD/DEAH box helicase strong 29 15
  Pseudomonas aeruginosa PA14 IKLFDK_23280 DEAD/DEAH box helicase strong 29 15
  Pseudomonas aeruginosa PUPa3 DQ20_RS37180 DEAD/DEAH box helicase strong 29 15
  Klebsiella pneumoniae MKP103 KDGMDA_28495 ATP-dependent RNA helicase SrmB cofit 27 17
  Fusobacterium nucleatum SB010 HUW76_08675 DEAD/DEAH box helicase family protein strong 27 20
  Pseudomonas sp. S08-1 OH686_10835 ATP-dependent RNA helicase RhlE cofit 29 15
  Shewanella sp. ANA-3 Shewana3_1422 4a-hydroxytetrahydrobiopterin dehydratase (RefSeq) no data 26 19
  Shewanella loihica PV-4 Shew_1454 DEAD/DEAH box helicase domain-containing protein (RefSeq) strong 28 20
  Azospirillum sp. SherDot2 MPMX19_01520 hypothetical protein insig. 23 60
  Desulfovibrio vulgaris Hildenborough JW710 DVU3088 deaD ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) sig. 38 9
  Burkholderia phytofirmans PsJN BPHYT_RS16445 RNA helicase strong 29 17
  Pseudomonas stutzeri RCH2 Psest_0344 Superfamily II DNA and RNA helicases insig. 28 19
  Pseudomonas simiae WCS417 PS417_20275 RNA helicase no data 25 28
  Pseudomonas putida KT2440 PP_4532 ATP-dependent DEAD-box RNA helicase require for 50S ribosomal subunit biogenesis strong 24 29
  Rhodanobacter sp. FW510-T8 OKGIIK_13010 hepA ATP-dependent helicase insig. 20 16
  Pseudomonas sp. BP01 JOY50_RS01230 DEAD/DEAH box helicase insig. 31 16
  Dickeya dianthicola ME23 DZA65_RS16945 ATP-dependent RNA helicase SrmB cofit 30 16
  Sphingobium sp. HT1-2 GFF1881 ATP-dependent RNA helicase Atu4171 no data 29 15
  Escherichia coli BL21 ECD_01320 ATP-dependent RNA helicase, specific for 23S rRNA insig. 31 17
  Escherichia fergusonii Becca EFB2_02584 ATP-dependent RNA helicase DbpA insig. 31 17
  Escherichia coli ECRC62 BNILDI_18025 dbpA ATP-dependent RNA helicase DbpA insig. 31 17
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02338 ATP-dependent RNA helicase DbpA insig. 31 17
  Escherichia coli Nissle 1917 ECOLIN_RS08060 ATP-dependent RNA helicase DbpA insig. 31 17
  Escherichia coli BW25113 b1343 dbpA ATP-dependent RNA helicase, specific for 23S rRNA (NCBI) insig. 31 17
  Dickeya dianthicola 67-19 HGI48_RS15865 ATP-dependent RNA helicase SrmB cofit 30 14
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04249 ATP-dependent RNA helicase RhlE insig. 26 28
  Pseudomonas orientalis W4I3 QF045_RS22365 DEAD/DEAH box helicase insig. 26 28
  Acinetobacter baumannii LAC-4 RR41_RS17435 excinuclease ABC subunit UvrC insig. 33 10
  Acinetobacter radioresistens SK82 MPMX26_00228 UvrABC system protein C sig. 32 11
  Escherichia coli ECOR27 NOLOHH_19875 dbpA ATP-dependent RNA helicase DbpA insig. 31 17
  Escherichia coli ECRC100 OKFHMN_02160 dbpA ATP-dependent RNA helicase DbpA cofit 31 17
  Escherichia coli ECRC101 MCAODC_16095 dbpA ATP-dependent RNA helicase DbpA insig. 31 17
  Escherichia coli ECRC102 NIAGMN_26330 dbpA ATP-dependent RNA helicase DbpA insig. 31 17
  Escherichia coli ECRC98 JDDGAC_04720 dbpA ATP-dependent RNA helicase DbpA insig. 31 17
  Escherichia coli ECRC99 KEDOAH_26595 dbpA ATP-dependent RNA helicase DbpA no data 31 17
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2649 ATP-dependent 23S rRNA helicase DbpA insig. 28 24
  Klebsiella michiganensis M5al BWI76_RS12705 ATP-dependent RNA helicase insig. 27 25
  Pseudomonas sp. S08-1 OH686_23015 hypothetical protein insig. 25 24
  Rahnella sp. WP5 EX31_RS21785 ATP-dependent RNA helicase SrmB cofit 25 26
  Pseudomonas fluorescens FW300-N2C3 AO356_04210 RNA helicase no data 24 28
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS17040 DNA helicase RecQ cofit 32 17
  Desulfovibrio vulgaris Hildenborough JW710 DVU1982 rhlE ATP-dependent RNA helicase RhlE (TIGR) insig. 30 14
  Pseudomonas segetis P6 ACVTMO_RS03195 DEAD/DEAH box helicase strong 29 15
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS22835 ATP-dependent DNA helicase RecG strong 27 19
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2274.1 ATP-dependent 23S rRNA helicase DbpA sig. 25 31
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2675 ATP-dependent RNA helicase SrmB insig. 24 28