Homologs of LRK55_RS04700 from Rhodanobacter denitrificans MT42

YebC/PmpR family DNA-binding transcriptional regulator
SEED: FIG000859: hypothetical protein YebC

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodanobacter denitrificans MT42 LRK55_RS04700 YebC/PmpR family DNA-binding transcriptional regulator strong 100 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS04920 YebC/PmpR family DNA-binding transcriptional regulator strong 100 100
o Rhodanobacter sp. FW510-T8 OKGIIK_01830 tACO1 YebC/PmpR family DNA-binding transcriptional regulator insig. 89 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS10850 YebC/PmpR family DNA-binding transcriptional regulator no data 67 99
o Lysobacter sp. OAE881 ABIE51_RS05035 YebC/PmpR family DNA-binding transcriptional regulator insig. 57 98
o Cupriavidus basilensis FW507-4G11 RR42_RS04735 hypothetical protein strong 52 98
o Kangiella aquimarina DSM 16071 B158DRAFT_1123 DNA-binding regulatory protein, YebC/PmpR family strong 49 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1434.1 FIG000859: hypothetical protein YebC insig. 56 89
o Shewanella amazonensis SB2B Sama_1842 hypothetical protein (RefSeq) insig. 52 98
o Pseudomonas syringae pv. syringae B728a Psyr_1407 Protein of unknown function DUF28 insig. 51 98
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1407 Protein of unknown function DUF28 insig. 51 98
o Shewanella loihica PV-4 Shew_2078 hypothetical protein (RefSeq) no data 51 98
o Pseudomonas fluorescens FW300-N2C3 AO356_18010 hypothetical protein strong 51 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5534 FIG000859: hypothetical protein YebC strong 51 98
o Castellaniella sp019104865 MT123 ABCV34_RS02555 YebC/PmpR family DNA-binding transcriptional regulator no data 49 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1850 FIG000859: hypothetical protein YebC strong 50 98
o Pectobacterium carotovorum WPP14 HER17_RS11855 YebC/PmpR family DNA-binding transcriptional regulator insig. 52 95
o Pseudomonas sp. RS175 PFR28_03415 Transcriptional regulatory protein PmpR strong 50 98
o Dickeya dadantii 3937 DDA3937_RS10065 YebC/PmpR family DNA-binding transcriptional regulator insig. 52 95
o Acinetobacter radioresistens SK82 MPMX26_01851 putative transcriptional regulatory protein YebC cofit 50 96
o Serratia liquefaciens MT49 IAI46_14635 YebC/PmpR family DNA-binding transcriptional regulator cofit 51 95
o Enterobacter asburiae PDN3 EX28DRAFT_0693 DNA-binding regulatory protein, YebC/PmpR family insig. 52 93
o Klebsiella michiganensis M5al BWI76_RS18160 YebC/PmpR family DNA-binding transcriptional regulator no data 52 93
o Dickeya dianthicola 67-19 HGI48_RS10095 YebC/PmpR family DNA-binding transcriptional regulator insig. 51 95
o Dickeya dianthicola ME23 DZA65_RS10510 YebC/PmpR family DNA-binding transcriptional regulator insig. 51 95
o Ralstonia solanacearum PSI07 RPSI07_RS13685 YebC/PmpR family DNA-binding transcriptional regulator no data 52 91
o Pseudomonas sp. S08-1 OH686_19120 Probable transcriptional regulatory protein YebC sig. 50 98
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS03540 YebC/PmpR family DNA-binding transcriptional regulator no data 52 91
o Ralstonia solanacearum UW163 UW163_RS10130 YebC/PmpR family DNA-binding transcriptional regulator no data 52 91
o Marinobacter adhaerens HP15 HP15_2043 protein YebC insig. 47 98
o Acidovorax sp. GW101-3H11 Ac3H11_2422 FIG000859: hypothetical protein no data 51 98
o Pantoea sp. MT58 IAI47_08435 YebC/PmpR family DNA-binding transcriptional regulator strong 51 95
o Dechlorosoma suillum PS Dsui_0489 DNA-binding regulatory protein, YebC/PmpR family strong 48 98
o Ralstonia solanacearum GMI1000 RS_RS10990 YebC/PmpR family DNA-binding transcriptional regulator sig. 52 91
o Shewanella sp. ANA-3 Shewana3_1954 hypothetical protein (RefSeq) insig. 49 98
o Shewanella oneidensis MR-1 SO2432 conserved hypothetical protein TIGR01033 (NCBI ptt file) strong 49 98
o Escherichia coli BL21 ECD_01835 UPF0082 family protein insig. 50 95
o Escherichia fergusonii Becca EFB2_02078 putative transcriptional regulatory protein YebC insig. 50 95
o Escherichia coli ECOR27 NOLOHH_16700 putative transcriptional regulatory protein YebC no data 50 95
o Escherichia coli ECOR38 HEPCGN_04665 putative transcriptional regulatory protein YebC cofit 50 95
o Escherichia coli ECRC101 OKFHMN_26255 putative transcriptional regulatory protein YebC insig. 50 95
o Escherichia coli ECRC101 MCAODC_19150 putative transcriptional regulatory protein YebC insig. 50 95
o Escherichia coli ECRC102 NIAGMN_01805 putative transcriptional regulatory protein YebC no data 50 95
o Escherichia coli ECRC62 BNILDI_15490 putative transcriptional regulatory protein YebC insig. 50 95
o Escherichia coli ECRC98 JDDGAC_00830 putative transcriptional regulatory protein YebC no data 50 95
o Escherichia coli ECRC99 KEDOAH_01850 putative transcriptional regulatory protein YebC no data 50 95
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01864 putative transcriptional regulatory protein YebC insig. 50 95
o Escherichia coli Nissle 1917 ECOLIN_RS10380 YebC/PmpR family DNA-binding transcriptional regulator no data 50 95
o Escherichia coli BW25113 b1864 yebC hypothetical protein (NCBI) sig. 50 95
o Herbaspirillum seropedicae SmR1 HSERO_RS17750 transcriptional regulator no data 49 98
o Enterobacter sp. TBS_079 MPMX20_02769 putative transcriptional regulatory protein YebC sig. 51 93
o Ralstonia sp. UNC404CL21Col ABZR87_RS15405 YebC/PmpR family DNA-binding transcriptional regulator sig. 52 91
o Rahnella sp. WP5 EX31_RS11685 YebC/PmpR family DNA-binding transcriptional regulator insig. 50 95
o Burkholderia phytofirmans PsJN BPHYT_RS06410 transcriptional regulator sig. 52 91
o Erwinia tracheiphila SCR3 LU632_RS13425 YebC/PmpR family DNA-binding transcriptional regulator insig. 50 95
o Pseudomonas stutzeri RCH2 Psest_1494 DNA-binding regulatory protein, YebC/PmpR family no data 48 98
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1645 FIG000859: hypothetical protein YebC insig. 50 95
o Paraburkholderia graminis OAS925 ABIE53_001546 YebC/PmpR family DNA-binding regulatory protein sig. 52 91
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04522 DNA-binding regulatory protein, YebC/PmpR family no data 52 91
o Pseudomonas simiae WCS417 PS417_22460 hypothetical protein no data 50 98
o Pseudomonas fluorescens SBW25 PFLU_RS24100 YebC/PmpR family DNA-binding transcriptional regulator cofit 50 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS24100 YebC/PmpR family DNA-binding transcriptional regulator strong 50 98
o Pseudomonas fluorescens FW300-N2E3 AO353_03595 hypothetical protein strong 50 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_640 FIG000859: hypothetical protein YebC no data 50 98
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4523 FIG000859: hypothetical protein YebC strong 51 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS24395 YebC/PmpR family DNA-binding transcriptional regulator strong 51 90
o Pseudomonas putida KT2440 PP_1214 putative transcriptional regulatory protein sig. 48 98
o Variovorax sp. SCN45 GFF303 Probable transcriptional regulatory protein YebC cofit 50 98
o Variovorax sp. OAS795 ABID97_RS16740 YebC/PmpR family DNA-binding transcriptional regulator strong 48 98
o Desulfovibrio vulgaris Hildenborough JW710 DVU2259 conserved hypothetical protein TIGR01033 (TIGR) strong 47 98
o Sinorhizobium meliloti 1021 SMc03969 hypothetical protein strong 46 95
o Azospirillum sp. SherDot2 MPMX19_00695 putative transcriptional regulatory protein insig. 49 95
o Fusobacterium nucleatum SB010 HUW76_01460 YebC/PmpR family DNA-binding transcriptional regulator strong 43 98
o Agrobacterium fabrum C58 Atu3727 hypothetical protein strong 44 95
o Azospirillum brasilense Sp245 AZOBR_RS09035 transcriptional regulator insig. 48 95
o Magnetospirillum magneticum AMB-1 AMB_RS16265 YebC/PmpR family DNA-binding transcriptional regulator no data 47 97
o Bosea sp. OAE506 ABIE41_RS09460 YebC/PmpR family DNA-binding transcriptional regulator strong 45 95
o Rhodopseudomonas palustris CGA009 TX73_005640 YebC/PmpR family DNA-binding transcriptional regulator sig. 46 95
o Desulfovibrio vulgaris Miyazaki F DvMF_3201 hypothetical protein (RefSeq) strong 46 98
o Rhizobium sp. OAE497 ABIE40_RS15665 YebC/PmpR family DNA-binding transcriptional regulator insig. 43 95
o Rhodospirillum rubrum S1H Rru_A1086 hypothetical protein (RefSeq) strong 44 95
o Phaeobacter inhibens DSM 17395 PGA1_c21770 DNA-binding regulatory protein, YebC/PmpR family no data 41 96
o Bifidobacterium breve UCC2003 BBR_RS15645 YebC/PmpR family DNA-binding transcriptional regulator no data 45 86
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0824 DNA-binding regulatory protein, YebC/PmpR family no data 45 95
o Dinoroseobacter shibae DFL-12 Dshi_2762 protein of unknown function DUF28 (RefSeq) strong 41 96
o Caulobacter crescentus NA1000 CCNA_03352 YebC/PmpR transcriptional regulator strong 44 88
o Caulobacter crescentus NA1000 Δfur CCNA_03352 YebC/PmpR transcriptional regulator cofit 44 88
o Mycobacterium tuberculosis H37Rv Rv2603c Highly conserved protein no data 42 93
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS15840 YebC/PmpR family DNA-binding transcriptional regulator no data 40 95
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_01650 YebC/PmpR family DNA-binding transcriptional regulator strong 42 98
o Bacteroides ovatus ATCC 8483 BACOVA_02249 DNA-binding regulatory protein, YebC/PmpR family strong 40 97
o Bacteroides thetaiotaomicron VPI-5482 BT0627 conserved hypothetical protein, with a conserved domain of unknown function (NCBI ptt file) no data 40 97
  Pseudomonas stutzeri RCH2 Psest_2795 Uncharacterized conserved protein no data 42 92
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS09835 YebC/PmpR family DNA-binding transcriptional regulator strong 41 97
  Acidovorax sp. GW101-3H11 Ac3H11_2444 FIG000859: hypothetical protein insig. 40 96
o Synechococcus elongatus PCC 7942 Synpcc7942_1017 hypothetical protein insig. 40 98
o Bacteroides stercoris CC31F HMPREF1181_RS16620 YebC/PmpR family DNA-binding transcriptional regulator strong 38 97
o Phocaeicola dorei CL03T12C01 ABI39_RS17640 YebC/PmpR family DNA-binding transcriptional regulator strong 37 100
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03510 YebC/PmpR family DNA-binding transcriptional regulator strong 37 100
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_12515 YebC/PmpR family DNA-binding transcriptional regulator strong 39 98