Homologs of HMPREF1078_RS07645 from Parabacteroides merdae CL09T00C40

ribosome biogenesis GTP-binding protein YihA/YsxC
SEED: GTP-binding protein EngB
KEGG: GTP-binding protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS07645 ribosome biogenesis GTP-binding protein YihA/YsxC no data 100 100
o Phocaeicola dorei CL03T12C01 ABI39_RS14860 YihA family ribosome biogenesis GTP-binding protein no data 74 100
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS18550 YihA family ribosome biogenesis GTP-binding protein no data 73 100
o Bacteroides ovatus ATCC 8483 BACOVA_04056 ribosome biogenesis GTP-binding protein YsxC no data 74 100
o Bacteroides stercoris CC31F HMPREF1181_RS16460 YihA family ribosome biogenesis GTP-binding protein no data 70 100
o Bacteroides thetaiotaomicron VPI-5482 BT1083 putative GTP-binding protein (NCBI ptt file) no data 73 100
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00440 YihA family ribosome biogenesis GTP-binding protein no data 58 100
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15125 YihA family ribosome biogenesis GTP-binding protein no data 58 100
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS14760 ribosome biogenesis GTP-binding protein YihA/YsxC no data 56 100
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1823 ribosome biogenesis GTP-binding protein YsxC/EngB no data 47 97
o Fusobacterium nucleatum SB010 HUW76_01070 YihA family ribosome biogenesis GTP-binding protein no data 46 97
  Azospirillum sp. SherDot2 MPMX19_00331 GTP-binding protein EngB no data 41 91
  Caulobacter crescentus NA1000 CCNA_00805 GTP-binding protein YihA insig. 40 89
  Caulobacter crescentus NA1000 Δfur CCNA_00805 GTP-binding protein YihA no data 40 89
o Phaeobacter inhibens DSM 17395 PGA1_c02070 putative GTP binding protein EngB no data 42 90
  Dinoroseobacter shibae DFL-12 Dshi_0326 GTP-binding protein HSR1-related (RefSeq) no data 42 83
o Pantoea sp. MT58 IAI47_00435 YihA family ribosome biogenesis GTP-binding protein no data 40 94
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14265 ribosome biogenesis GTP-binding protein YihA/YsxC no data 38 91
o Azospirillum brasilense Sp245 AZOBR_RS03300 GTP-binding protein YsxC no data 39 91
o Pseudomonas stutzeri RCH2 Psest_0184 ribosome biogenesis GTP-binding protein YsxC/EngB no data 37 91
o Escherichia coli BL21 ECD_03750 cell division GTP-binding protein no data 37 95
o Escherichia fergusonii Becca EFB2_04752 putative GTP-binding protein EngB no data 37 95
o Escherichia coli ECOR27 NOLOHH_06270 yihA ribosome biogenesis GTP-binding protein YihA/YsxC no data 37 95
o Escherichia coli ECOR38 HEPCGN_12775 yihA ribosome biogenesis GTP-binding protein YihA/YsxC no data 37 95
o Escherichia coli ECRC101 OKFHMN_14140 yihA ribosome biogenesis GTP-binding protein YihA/YsxC no data 37 95
o Escherichia coli ECRC101 MCAODC_04640 yihA ribosome biogenesis GTP-binding protein YihA/YsxC no data 37 95
o Escherichia coli ECRC102 NIAGMN_11895 yihA ribosome biogenesis GTP-binding protein YihA/YsxC no data 37 95
o Escherichia coli ECRC62 BNILDI_05260 yihA ribosome biogenesis GTP-binding protein YihA/YsxC no data 37 95
o Escherichia coli ECRC98 JDDGAC_17765 yihA ribosome biogenesis GTP-binding protein YihA/YsxC no data 37 95
o Escherichia coli ECRC99 KEDOAH_14010 yihA ribosome biogenesis GTP-binding protein YihA/YsxC no data 37 95
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04188 putative GTP-binding protein EngB no data 37 95
o Escherichia coli Nissle 1917 ECOLIN_RS22275 ribosome biogenesis GTP-binding protein YihA/YsxC no data 37 95
o Escherichia coli BW25113 b3865 yihA GTP-binding protein (RefSeq) no data 37 95
o Dickeya dadantii 3937 DDA3937_RS00110 YihA family ribosome biogenesis GTP-binding protein no data 38 94
o Pseudomonas fluorescens GW456-L13 PfGW456L13_593 GTP-binding protein EngB no data 37 91
o Pseudomonas fluorescens FW300-N2E3 AO353_10935 GTP-binding protein no data 37 91
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0792 ribosome biogenesis GTP-binding protein YsxC/EngB no data 39 89
o Rahnella sp. WP5 EX31_RS15900 YihA family ribosome biogenesis GTP-binding protein no data 38 94
o Pseudomonas sp. RS175 PFR28_04625 putative GTP-binding protein EngB no data 37 91
o Pseudomonas fluorescens FW300-N2C3 AO356_11460 GTP-binding protein no data 37 91
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4161 GTP-binding protein EngB no data 37 91
o Dickeya dianthicola 67-19 HGI48_RS21255 YihA family ribosome biogenesis GTP-binding protein no data 38 94
  Dickeya dianthicola ME23 DZA65_RS22230 YihA family ribosome biogenesis GTP-binding protein insig. 38 94
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2217 GTP-binding protein EngB no data 37 95
o Shewanella amazonensis SB2B Sama_0092 engB ribosome biogenesis GTP-binding protein YsxC (RefSeq) no data 37 97
  Desulfovibrio vulgaris Hildenborough JW710 DVU1664 GTP-binding protein (TIGR) no data 46 64
o Shewanella sp. ANA-3 Shewana3_4110 engB ribosome biogenesis GTP-binding protein YsxC (RefSeq) no data 37 97
o Rhodospirillum rubrum S1H Rru_A3340 GTP-binding (NCBI) no data 35 92
o Enterobacter sp. TBS_079 MPMX20_04600 putative GTP-binding protein EngB no data 37 95
o Klebsiella michiganensis M5al BWI76_RS00365 YihA family ribosome biogenesis GTP-binding protein no data 38 94
o Pseudomonas fluorescens SBW25 PFLU_RS00400 YihA family ribosome biogenesis GTP-binding protein no data 37 91
o Pseudomonas fluorescens SBW25-INTG PFLU_RS00400 YihA family ribosome biogenesis GTP-binding protein no data 37 91
o Pseudomonas simiae WCS417 PS417_00410 GTP-binding protein no data 37 91
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1876 GTP-binding protein EngB no data 37 91
  Pseudomonas syringae pv. syringae B728a Psyr_0269 cell division checkpoint GTPase YihA no data 36 91
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0269 cell division checkpoint GTPase YihA no data 36 91
o Shewanella oneidensis MR-1 SO4667 engB GTP-binding protein EngB (NCBI ptt file) no data 36 97
o Pseudomonas putida KT2440 PP_0124 probable GTP-binding protein no data 35 91
o Marinobacter adhaerens HP15 HP15_3327 GTP-binding protein EngB no data 35 94
o Sinorhizobium meliloti 1021 SMc01722 ribosome biogenesis GTP-binding protein YsxC no data 38 89
o Magnetospirillum magneticum AMB-1 AMB_RS22040 YihA family ribosome biogenesis GTP-binding protein no data 38 89
o Pectobacterium carotovorum WPP14 HER17_RS21465 ribosome biogenesis GTP-binding protein YihA/YsxC no data 37 94
  Vibrio cholerae E7946 ATCC 55056 CSW01_00565 GTP-binding protein no data 42 78
o Rhizobium sp. OAE497 ABIE40_RS01990 ribosome biogenesis GTP-binding protein YihA/YsxC no data 38 85
o Shewanella loihica PV-4 Shew_3715 GTPase EngB (RefSeq) no data 37 97
o Pseudomonas sp. S08-1 OH686_12210 ribosome biogenesis GTP-binding protein YsxC no data 36 91
o Agrobacterium fabrum C58 Atu0383 GTP-binding protein no data 38 91
  Erwinia tracheiphila SCR3 LU632_RS23830 yihA ribosome biogenesis GTP-binding protein YihA/YsxC no data 40 78
o Enterobacter asburiae PDN3 EX28DRAFT_4345 ribosome biogenesis GTP-binding protein YsxC/EngB no data 36 95
o Serratia liquefaciens MT49 IAI46_24980 YihA family ribosome biogenesis GTP-binding protein no data 37 91
  Herbaspirillum seropedicae SmR1 HSERO_RS00760 GTP-binding protein EngB no data 35 80
  Acinetobacter radioresistens SK82 MPMX26_02727 GTP-binding protein EngB cofit 42 75
o Kangiella aquimarina DSM 16071 B158DRAFT_0503 ribosome biogenesis GTP-binding protein YsxC/EngB no data 35 97
  Ralstonia solanacearum GMI1000 RS_RS14975 GTP-binding protein no data 36 74
  Ralstonia sp. UNC404CL21Col ABZR87_RS02685 ribosome biogenesis GTP-binding protein YihA/YsxC no data 36 74
  Cupriavidus basilensis FW507-4G11 RR42_RS19095 GTP-binding protein no data 35 79
o Rhodanobacter denitrificans MT42 LRK55_RS06945 ribosome biogenesis GTP-binding protein YihA/YsxC no data 31 89
  Desulfovibrio vulgaris Miyazaki F DvMF_0374 engB ribosome biogenesis GTP-binding protein YsxC (RefSeq) no data 45 65
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS07035 YihA family ribosome biogenesis GTP-binding protein no data 35 74
  Ralstonia solanacearum UW163 UW163_RS06580 YihA family ribosome biogenesis GTP-binding protein no data 35 74
o Rhodopseudomonas palustris CGA009 TX73_003265 ribosome biogenesis GTP-binding protein YihA/YsxC no data 33 94
  Ralstonia solanacearum PSI07 RPSI07_RS10205 YihA family ribosome biogenesis GTP-binding protein no data 36 74
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS07210 ribosome biogenesis GTP-binding protein YihA/YsxC no data 31 89
  Alteromonas macleodii MIT1002 MIT1002_00013 putative GTP-binding protein EngB no data 39 76
o Bosea sp. OAE506 ABIE41_RS03995 ribosome biogenesis GTP-binding protein YihA/YsxC no data 35 89
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.971.1 GTP-binding protein EngB no data 35 82
o Lysobacter sp. OAE881 ABIE51_RS19010 ribosome biogenesis GTP-binding protein YihA/YsxC no data 33 91
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1352 GTP-binding protein EngB no data 38 80
  Castellaniella sp019104865 MT123 ABCV34_RS12660 ribosome biogenesis GTP-binding protein YihA/YsxC no data 35 81
  Variovorax sp. SCN45 GFF5309 GTP-binding protein EngB no data 36 80
  Dechlorosoma suillum PS Dsui_1305 ribosome biogenesis GTP-binding protein YsxC/EngB no data 34 91
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS12710 ribosome biogenesis GTP-binding protein YihA/YsxC no data 33 81
  Acidovorax sp. GW101-3H11 Ac3H11_2972 GTP-binding protein EngB no data 34 93
  Paraburkholderia graminis OAS925 ABIE53_003755 GTP-binding protein no data 32 80
  Paraburkholderia sabiae LMG 24235 QEN71_RS28110 ribosome biogenesis GTP-binding protein YihA/YsxC no data 33 74
  Burkholderia phytofirmans PsJN BPHYT_RS17960 GTP-binding protein EngB no data 31 82
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05600 cell division checkpoint GTPase YihA no data 31 80
  Variovorax sp. OAS795 ABID97_RS23335 ribosome biogenesis GTP-binding protein YihA/YsxC no data 35 83
o Rhodanobacter sp. FW510-T8 OKGIIK_16445 yihA ribosome biogenesis GTP-binding protein YihA/YsxC no data 28 89
  Methanococcus maripaludis JJ MMJJ_RS07705 GTP-binding protein EngB strong 31 75