Homologs of HGI48_RS03440 from Dickeya dianthicola 67-19

site-specific tyrosine recombinase XerD
SEED: Tyrosine recombinase XerD
KEGG: integrase/recombinase XerD

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dickeya dianthicola 67-19 HGI48_RS03440 site-specific tyrosine recombinase XerD insig. 100 100
o Dickeya dianthicola ME23 DZA65_RS03485 site-specific tyrosine recombinase XerD no data 100 100
o Dickeya dadantii 3937 DDA3937_RS03300 site-specific tyrosine recombinase XerD insig. 98 100
o Pectobacterium carotovorum WPP14 HER17_RS17890 site-specific tyrosine recombinase XerD strong 87 100
o Serratia liquefaciens MT49 IAI46_20730 site-specific tyrosine recombinase XerD insig. 85 100
o Pantoea sp. MT58 IAI47_03820 site-specific tyrosine recombinase XerD strong 86 99
o Erwinia tracheiphila SCR3 LU632_RS05975 xerD site-specific tyrosine recombinase XerD no data 84 99
o Enterobacter asburiae PDN3 EX28DRAFT_2945 tyrosine recombinase XerD insig. 84 99
o Escherichia coli BL21 ECD_02726 site-specific tyrosine recombinase strong 84 99
o Escherichia fergusonii Becca EFB2_01007 Tyrosine recombinase XerD strong 84 99
o Escherichia coli ECOR27 NOLOHH_11495 xerD site-specific tyrosine recombinase XerD no data 84 99
o Escherichia coli ECRC101 OKFHMN_19570 xerD site-specific tyrosine recombinase XerD no data 84 99
o Escherichia coli ECRC101 MCAODC_10090 xerD site-specific tyrosine recombinase XerD no data 84 99
o Escherichia coli ECRC62 BNILDI_10025 xerD site-specific tyrosine recombinase XerD insig. 84 99
o Escherichia coli ECRC98 JDDGAC_23210 xerD site-specific tyrosine recombinase XerD no data 84 99
o Escherichia coli ECRC99 KEDOAH_08570 xerD site-specific tyrosine recombinase XerD no data 84 99
o Escherichia coli Nissle 1917 ECOLIN_RS16125 site-specific tyrosine recombinase XerD cofit 84 99
o Escherichia coli BW25113 b2894 xerD site-specific tyrosine recombinase XerD (NCBI) strong 84 99
o Escherichia coli ECOR38 HEPCGN_18860 xerD site-specific tyrosine recombinase XerD cofit 84 99
o Rahnella sp. WP5 EX31_RS13480 site-specific tyrosine recombinase XerD strong 82 100
o Enterobacter sp. TBS_079 MPMX20_03753 Tyrosine recombinase XerD strong 84 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00821 Tyrosine recombinase XerD sig. 84 99
o Escherichia coli ECRC102 NIAGMN_17335 xerD site-specific tyrosine recombinase XerD no data 84 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2991 Tyrosine recombinase XerD cofit 84 99
o Klebsiella michiganensis M5al BWI76_RS23815 site-specific tyrosine recombinase XerD no data 81 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_12250 site-specific tyrosine recombinase XerD strong 70 99
o Pseudomonas putida KT2440 PP_1468 Tyrosine recombinase XerD strong 63 100
o Shewanella sp. ANA-3 Shewana3_3331 tyrosine recombinase XerD (RefSeq) strong 61 99
o Shewanella oneidensis MR-1 SO0950 xerD integrase/recombinase XerD (NCBI ptt file) strong 61 99
o Marinobacter adhaerens HP15 HP15_762 site-specific tyrosine recombinase XerD insig. 59 100
o Pseudomonas sp. S08-1 OH686_17750 tyrosine recombinase XerD insig. 61 100
o Pseudomonas syringae pv. syringae B728a Psyr_1286 tyrosine recombinase XerD subunit sig. 59 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1286 tyrosine recombinase XerD subunit sig. 59 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3145 Tyrosine recombinase XerD no data 60 100
o Pseudomonas fluorescens FW300-N2C3 AO356_06385 recombinase XerD strong 60 100
o Shewanella amazonensis SB2B Sama_2739 integrase/recombinase XerD (RefSeq) strong 61 98
o Pseudomonas fluorescens FW300-N2E3 AO353_04365 recombinase XerD strong 60 100
o Pseudomonas fluorescens SBW25 PFLU_RS24560 site-specific tyrosine recombinase XerD sig. 60 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS24560 site-specific tyrosine recombinase XerD strong 60 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1721 Tyrosine recombinase XerD strong 60 100
o Pseudomonas stutzeri RCH2 Psest_3129 tyrosine recombinase XerD insig. 59 100
o Pseudomonas simiae WCS417 PS417_22895 tyrosine recombinase XerD strong 59 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3011 Tyrosine recombinase XerD insig. 60 100
o Alteromonas macleodii MIT1002 MIT1002_00786 Tyrosine recombinase XerD insig. 59 98
o Shewanella loihica PV-4 Shew_0770 tyrosine recombinase XerD (RefSeq) strong 59 99
o Pseudomonas sp. RS175 PFR28_00331 Tyrosine recombinase XerD strong 60 100
o Lysobacter sp. OAE881 ABIE51_RS04495 site-specific tyrosine recombinase XerD strong 58 99
o Kangiella aquimarina DSM 16071 B158DRAFT_2265 tyrosine recombinase XerD strong 54 98
o Ralstonia solanacearum PSI07 RPSI07_RS12160 site-specific tyrosine recombinase XerD insig. 57 97
o Burkholderia phytofirmans PsJN BPHYT_RS15950 tyrosine recombinase XerD sig. 56 98
o Castellaniella sp019104865 MT123 ABCV34_RS00515 site-specific tyrosine recombinase XerD insig. 59 97
o Ralstonia solanacearum GMI1000 RS_RS12755 tyrosine recombinase XerD no data 58 97
o Paraburkholderia graminis OAS925 ABIE53_003361 integrase/recombinase XerD strong 56 98
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS05140 site-specific tyrosine recombinase XerD insig. 57 97
o Ralstonia solanacearum UW163 UW163_RS08485 site-specific tyrosine recombinase XerD insig. 57 97
o Paraburkholderia sabiae LMG 24235 QEN71_RS02755 site-specific tyrosine recombinase XerD no data 56 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04126 integrase/recombinase XerD no data 55 98
o Cupriavidus basilensis FW507-4G11 RR42_RS03345 recombinase XerD sig. 56 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4441.1 Tyrosine recombinase XerD sig. 54 100
o Variovorax sp. OAS795 ABID97_RS20265 site-specific tyrosine recombinase XerD insig. 55 97
o Variovorax sp. SCN45 GFF2772 Site-specific tyrosine recombinase XerD strong 55 97
o Herbaspirillum seropedicae SmR1 HSERO_RS04265 tyrosine recombinase XerD insig. 54 97
o Dechlorosoma suillum PS Dsui_1217 tyrosine recombinase XerD cofit 53 98
o Acidovorax sp. GW101-3H11 Ac3H11_302 Tyrosine recombinase XerD no data 53 97
  Dechlorosoma suillum PS Dsui_2597 tyrosine recombinase XerD cofit 52 98
o Ralstonia sp. UNC404CL21Col ABZR87_RS00795 site-specific tyrosine recombinase XerD strong 54 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5461 Tyrosine recombinase XerD insig. 50 99
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS19225 site-specific tyrosine recombinase XerD strong 49 100
o Rhodanobacter sp. FW510-T8 OKGIIK_11520 xerD site-specific tyrosine recombinase XerD insig. 51 100
o Rhodanobacter denitrificans MT42 LRK55_RS04515 site-specific tyrosine recombinase XerD strong 51 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS04735 site-specific tyrosine recombinase XerD insig. 51 100
o Acinetobacter radioresistens SK82 MPMX26_00169 Tyrosine recombinase XerD no data 49 98
o Azospirillum sp. SherDot2 MPMX19_02643 Tyrosine recombinase XerD no data 48 97
o Sinorhizobium meliloti 1021 SMc00691 site-specific tyrosine recombinase XerD sig. 45 100
o Agrobacterium fabrum C58 Atu3629 site-specific tyrosine recombinase XerD no data 43 100
o Rhodopseudomonas palustris CGA009 TX73_002625 site-specific tyrosine recombinase XerD sig. 45 98
o Azospirillum brasilense Sp245 AZOBR_RS03240 recombinase XerD insig. 48 92
o Rhizobium sp. OAE497 ABIE40_RS17685 site-specific tyrosine recombinase XerD sig. 43 100
o Desulfovibrio vulgaris Miyazaki F DvMF_0359 tyrosine recombinase XerD (RefSeq) strong 44 97
o Rhodospirillum rubrum S1H Rru_A3738 Phage integrase (NCBI) no data 44 97
o Dinoroseobacter shibae DFL-12 Dshi_1611 integrase family protein (RefSeq) strong 43 97
o Desulfovibrio vulgaris Hildenborough JW710 DVU1654 xerD site-specific recombinase, phage integrase family (TIGR) sig. 40 97
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS04705 site-specific tyrosine recombinase XerD sig. 38 97
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1809 tyrosine recombinase XerD insig. 39 97
o Bacteroides ovatus ATCC 8483 BACOVA_02123 tyrosine recombinase XerD insig. 38 98
o Bosea sp. OAE506 ABIE41_RS06100 site-specific tyrosine recombinase XerD strong 42 100
o Phaeobacter inhibens DSM 17395 PGA1_c14060 tyrosine recombinase XerD strong 39 99
o Bifidobacterium breve UCC2003 BBR_RS16755 site-specific tyrosine recombinase XerD strong 40 98
o Magnetospirillum magneticum AMB-1 AMB_RS19880 site-specific tyrosine recombinase XerD cofit 41 97
  Marinobacter adhaerens HP15 HP15_250 site-specific tyrosine recombinase XerC strong 39 97
o Bacteroides thetaiotaomicron VPI-5482 BT2843 integrase (NCBI ptt file) strong 38 99
o Bacteroides stercoris CC31F HMPREF1181_RS01250 site-specific tyrosine recombinase XerD insig. 37 99
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00850 site-specific tyrosine recombinase XerD no data 38 97
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10220 site-specific tyrosine recombinase XerD insig. 39 96
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09520 site-specific tyrosine recombinase XerD sig. 38 97
o Mycobacterium tuberculosis H37Rv Rv1701 Probable integrase/recombinase sig. 41 97
o Phocaeicola dorei CL03T12C01 ABI39_RS07000 site-specific tyrosine recombinase XerD sig. 36 99
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09680 site-specific tyrosine recombinase XerD strong 36 99
o Caulobacter crescentus NA1000 CCNA_03101 site-specific tyrosine recombinase XerD strong 41 98
o Caulobacter crescentus NA1000 Δfur CCNA_03101 site-specific tyrosine recombinase XerD cofit 41 98