Homologs of PGA1_c06230 from Phaeobacter inhibens DSM 17395

putative protein Smf
SEED: Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake
KEGG: DNA processing protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Phaeobacter inhibens DSM 17395 PGA1_c06230 putative protein Smf insig. 100 100
o Dinoroseobacter shibae DFL-12 Dshi_1138 DNA protecting protein DprA (RefSeq) insig. 50 93
o Azospirillum brasilense Sp245 AZOBR_RS15885 DNA processing protein DprA insig. 46 90
o Azospirillum sp. SherDot2 MPMX19_01508 hypothetical protein insig. 47 92
o Magnetospirillum magneticum AMB-1 AMB_RS03500 DNA-protecting protein DprA cofit 47 90
o Sinorhizobium meliloti 1021 SMc01363 hypothetical protein insig. 43 92
o Bosea sp. OAE506 ABIE41_RS17215 DNA-processing protein DprA insig. 42 91
o Sphingobium sp. HT1-2 GFF113 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake cofit 46 83
o Agrobacterium fabrum C58 Atu1305 DNA processing chain A insig. 43 90
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04240 DNA-processing protein DprA insig. 44 90
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2448 DNA protecting protein DprA insig. 46 84
o Rhodospirillum rubrum S1H Rru_A3194 SMF protein (NCBI) insig. 45 91
o Rhizobium sp. OAE497 ABIE40_RS07365 DNA-processing protein DprA insig. 43 91
  Caulobacter crescentus NA1000 CCNA_02529 DNA recombination-mediator protein A, SMF family insig. 48 73
  Caulobacter crescentus NA1000 Δfur CCNA_02529 DNA recombination-mediator protein A, SMF family insig. 48 73
o Rhodopseudomonas palustris CGA009 TX73_016135 DNA-processing protein DprA insig. 45 90
o Xanthobacter sp. DMC5 GFF932 hypothetical protein insig. 44 90
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS09755 DNA-protecting protein DprA insig. 40 91
o Ralstonia solanacearum UW163 UW163_RS03825 DNA-protecting protein DprA insig. 40 91
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2571 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 39 91
o Ralstonia solanacearum GMI1000 RS_RS00340 DNA-protecting protein DprA insig. 40 91
o Ralstonia sp. UNC404CL21Col ABZR87_RS04985 DNA-processing protein DprA insig. 38 91
  Pseudomonas fluorescens GW456-L13 PfGW456L13_648 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 43 69
o Ralstonia solanacearum PSI07 RPSI07_RS23610 DNA-protecting protein DprA cofit 45 66
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1910 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 44 66
  Pseudomonas fluorescens SBW25 PFLU_RS00100 DNA-protecting protein DprA cofit 41 70
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00100 DNA-protecting protein DprA insig. 41 70
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00227 hypothetical protein insig. 43 70
  Pseudomonas fluorescens FW300-N2C3 AO356_11295 DNA processing protein DprA insig. 43 69
o Pseudomonas sp. BP01 JOY50_RS08235 dprA DNA-processing protein DprA insig. 37 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4125 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 43 69
o Cupriavidus basilensis FW507-4G11 RR42_RS20480 DNA processing protein DprA insig. 39 95
o Castellaniella sp019104865 MT123 ABCV34_RS14195 DNA-processing protein DprA insig. 37 92
o Dechlorosoma suillum PS Dsui_0819 DNA protecting protein DprA cofit 38 90
  Pseudomonas sp. DMC3 GFF594 hypothetical protein cofit 43 66
  Pseudomonas fluorescens FW300-N2E3 AO353_10650 DNA processing protein DprA insig. 43 66
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS13870 DNA-processing protein DprA insig. 42 68
o Pseudomonas sp. SVBP6 COO64_RS02230 dprA DNA-processing protein DprA insig. 38 90
  Pseudomonas stutzeri RCH2 Psest_0025 DNA protecting protein DprA sig. 49 54
  Pseudomonas sp. RS175 PFR28_04659 hypothetical protein insig. 44 66
o Herbaspirillum seropedicae SmR1 HSERO_RS23400 DNA processing protein DprA insig. 43 66
o Acidovorax sp. GW101-3H11 Ac3H11_4411 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 38 91
o Pseudomonas putida KT2440 PP_0069 putative Rossmann fold nucleotide-binding protein sig. 38 95
  Variovorax sp. SCN45 GFF5489 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 39 75
o Pseudomonas sp. S08-1 OH686_12505 DNA protecting protein DprA insig. 39 89
o Paraburkholderia sabiae LMG 24235 QEN71_RS00150 DNA-processing protein DprA insig. 36 93
  Rhodanobacter denitrificans MT42 LRK55_RS09785 DNA-processing protein DprA insig. 42 73
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10145 DNA-processing protein DprA sig. 42 73
  Shewanella oneidensis MR-1 SO0034 DNA processing protein DprA, putative (NCBI ptt file) insig. 45 56
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS02925 DNA-processing protein DprA insig. 50 50
o Methylophilus sp. DMC18 GFF1494 hypothetical protein insig. 32 91
  Shewanella sp. ANA-3 Shewana3_0037 DNA protecting protein DprA (RefSeq) insig. 45 56
o Variovorax sp. OAS795 ABID97_RS01830 DNA-processing protein DprA insig. 34 90
o Lysobacter sp. OAE881 ABIE51_RS02235 DNA-processing protein DprA insig. 37 88
  Rhodanobacter sp. FW510-T8 OKGIIK_13770 dprA DNA-processing protein DprA insig. 43 67
  Acinetobacter baumannii LAC-4 RR41_RS18085 DNA-processing protein DprA insig. 38 74
o Vibrio cholerae E7946 ATCC 55056 CSW01_00245 DNA-protecting protein DprA insig. 37 91
  Shewanella amazonensis SB2B Sama_0045 DNA processing protein DprA, putative (RefSeq) insig. 38 78
o Synechocystis sp000284455 PCC 6803 SGL_RS05985 DNA-processing protein DprA insig. 32 89
  Shewanella loihica PV-4 Shew_3734 DNA protecting protein DprA (RefSeq) insig. 46 53
o Pseudomonas syringae pv. syringae B728a Psyr_0021 DNA protecting protein DprA insig. 38 90
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0021 DNA protecting protein DprA insig. 38 90
o Pseudomonas segetis P6 MPMX49_00277 hypothetical protein insig. 38 77
o Acinetobacter radioresistens SK82 MPMX26_00114 hypothetical protein insig. 33 90
  Kangiella aquimarina DSM 16071 B158DRAFT_0400 DNA protecting protein DprA insig. 41 58
o Burkholderia phytofirmans PsJN BPHYT_RS01450 DNA-binding protein insig. 37 78
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04370 DNA protecting protein DprA insig. 34 88
  Alteromonas macleodii MIT1002 MIT1002_00022 DNA protecting protein DprA insig. 40 66
  Desulfovibrio vulgaris Hildenborough JW710 DVU2069 dprA DNA processing protein DprA, putative (TIGR) insig. 40 67
  Marinobacter adhaerens HP15 HP15_3746 DNA protecting protein DprA insig. 45 50
  Pseudomonas aeruginosa PA14 IKLFDK_25455 DNA-processing protein DprA insig. 46 54
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4746.1 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 40 74
  Desulfovibrio vulgaris Miyazaki F DvMF_0771 DNA protecting protein DprA (RefSeq) insig. 40 67
o Pectobacterium carotovorum WPP14 HER17_RS02230 DNA-protecting protein DprA insig. 34 90
o Dickeya dadantii 3937 DDA3937_RS19120 DNA-protecting protein DprA insig. 33 91
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_12485 dprA DNA-protecting protein DprA cofit 38 74
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS22540 DNA-protecting protein DprA insig. 40 55
  Erwinia tracheiphila SCR3 LU632_RS22465 dprA DNA-protecting protein DprA insig. 37 74
  Dickeya dianthicola 67-19 HGI48_RS19210 DNA-protecting protein DprA insig. 35 75
  Fusobacterium nucleatum SB010 HUW76_06810 DNA-protecting protein DprA strong 31 74
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02242 DNA protecting protein DprA insig. 42 54
  Dickeya dianthicola ME23 DZA65_RS20335 DNA-protecting protein DprA insig. 35 75
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2393 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 36 76
  Paraburkholderia graminis OAS925 ABIE53_000387 DNA processing protein insig. 42 50
  Pantoea sp. MT58 IAI47_02295 DNA-protecting protein DprA insig. 41 55
  Serratia liquefaciens MT49 IAI46_23260 DNA-protecting protein DprA insig. 36 77
o Bacteroides thetaiotaomicron VPI-5482 BT3070 Smf protein DNA processing chain A (NCBI ptt file) insig. 33 87
o Synechococcus elongatus PCC 7942 Synpcc7942_0703 smf DNA processing protein DprA, putative insig. 33 85
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13955 DNA-processing protein DprA insig. 32 87
o Phocaeicola dorei CL03T12C01 ABI39_RS05220 DNA-processing protein DprA insig. 32 91
o Rahnella sp. WP5 EX31_RS15970 DNA-protecting protein DprA cofit 32 90
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3854 DNA protecting protein DprA insig. 32 86
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS11685 DNA-protecting protein DprA insig. 33 91
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_06145 DNA protecting protein DprA insig. 37 62
  Escherichia coli ECRC100 OKFHMN_17535 dprA DNA-protecting protein DprA insig. 41 52
  Escherichia coli BL21 ECD_03136 DNA recombination-mediator A family protein insig. 35 75
  Escherichia coli ECRC101 MCAODC_08065 dprA DNA-protecting protein DprA insig. 35 75
  Escherichia coli ECRC102 NIAGMN_15305 dprA DNA-protecting protein DprA insig. 35 75
  Escherichia coli ECRC98 JDDGAC_21165 dprA DNA-protecting protein DprA insig. 35 75
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00418 hypothetical protein insig. 35 75