Homologs of GFF4716 from Xanthobacter sp. DMC5

Ribosomal RNA large subunit methyltransferase E
SEED: Heat shock protein FtsJ/RrmJ @ Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-)
KEGG: ribosomal RNA large subunit methyltransferase E

109 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF4716 Ribosomal RNA large subunit methyltransferase E no data 100 100
o Rhodopseudomonas palustris CGA009 TX73_011335 RlmE family RNA methyltransferase sig. 67 89
o Magnetospirillum magneticum AMB-1 AMB_RS19140 23S rRNA methyltransferase no data 63 93
o Azospirillum sp. SherDot2 MPMX19_01691 Ribosomal RNA large subunit methyltransferase E no data 60 93
o Bosea sp. OAE506 ABIE41_RS15205 RlmE family RNA methyltransferase no data 61 93
o Azospirillum brasilense Sp245 AZOBR_RS16115 23S rRNA methyltransferase no data 59 95
o Agrobacterium fabrum C58 Atu0620 cell division protein no data 55 96
o Phaeobacter inhibens DSM 17395 PGA1_c16080 ribosomal RNA large subunit methyltransferase J no data 55 93
o Sinorhizobium meliloti 1021 SMc00811 cell division protein no data 53 98
o Rhizobium sp. OAE497 ABIE40_RS03440 RlmE family RNA methyltransferase no data 57 90
o Rhodospirillum rubrum S1H Rru_A0245 Ribosomal RNA methyltransferase RrmJ/FtsJ (NCBI) no data 57 90
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2482 23S rRNA methylase no data 58 90
o Sphingobium sp. HT1-2 GFF3171 '23S rRNA (uridine(2552)-2'-O)-methyltransferase (EC 2.1.1.166)' transl_table=11 no data 57 90
o Caulobacter crescentus NA1000 CCNA_01687 FtsJ-family 23S rRNA methylase no data 52 94
o Caulobacter crescentus NA1000 Δfur CCNA_01687 FtsJ-family 23S rRNA methylase no data 52 94
o Dinoroseobacter shibae DFL-12 Dshi_1672 ribosomal RNA methyltransferase RrmJ/FtsJ (RefSeq) no data 55 90
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03015 RlmE family RNA methyltransferase no data 48 94
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1168 Heat shock protein FtsJ/RrmJ @ Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) no data 46 86
o Pseudomonas sp. DMC3 GFF4981 Ribosomal RNA large subunit methyltransferase E no data 46 85
o Pseudomonas fluorescens SBW25 PFLU_RS25860 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 47 88
o Pseudomonas fluorescens SBW25-INTG PFLU_RS25860 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 47 88
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04954 Ribosomal RNA large subunit methyltransferase E no data 47 88
o Pseudomonas orientalis W4I3 QF045_RS26275 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 47 88
o Pseudomonas simiae WCS417 PS417_24020 23S rRNA methyltransferase no data 47 88
o Alteromonas macleodii MIT1002 MIT1002_01864 Ribosomal RNA large subunit methyltransferase E insig. 46 86
o Pseudomonas sp. SVBP6 COO64_RS15220 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 45 85
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3360 Heat shock protein FtsJ/RrmJ @ Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) no data 47 88
o Pseudomonas sp. RS175 PFR28_00081 Ribosomal RNA large subunit methyltransferase E no data 47 88
o Pseudomonas fluorescens FW300-N2C3 AO356_07460 23S rRNA methyltransferase no data 47 88
o Dechlorosoma suillum PS Dsui_3060 23S rRNA methylase insig. 51 83
o Pseudomonas putida KT2440 PP_4719 Ribosomal RNA large subunit methyltransferase E no data 45 85
o Shewanella amazonensis SB2B Sama_0953 rrmJ 23S rRNA methyltransferase J (RefSeq) strong 46 86
o Pseudomonas syringae pv. syringae B728a Psyr_4188 23S rRNA Um-2552 2'-O-methyltransferase no data 46 85
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4188 23S rRNA Um-2552 2'-O-methyltransferase no data 46 85
o Pseudomonas fluorescens FW300-N2E3 AO353_05610 23S rRNA methyltransferase no data 46 85
o Pseudomonas sp. BP01 JOY50_RS26785 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 45 85
o Pseudomonas segetis P6 ACVTMO_RS05905 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 44 86
o Pseudomonas aeruginosa MRSN321 DY961_RS09515 rlmE;go_function=rRNA 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 46 85
o Pseudomonas aeruginosa PA14 IKLFDK_29835 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 46 85
o Pseudomonas aeruginosa PUPa3 DQ20_RS52520 rlmE;go_function=rRNA 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 46 85
o Kangiella aquimarina DSM 16071 B158DRAFT_0634 23S rRNA Um-2552 2'-O-methyltransferase (EC 2.1.1.166) insig. 45 85
o Pseudomonas fluorescens GW456-L13 PfGW456L13_5095 Heat shock protein FtsJ/RrmJ @ Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) no data 43 86
o Enterobacter sp. TBS_079 MPMX20_04083 Ribosomal RNA large subunit methyltransferase E no data 48 86
o Dickeya dianthicola 67-19 HGI48_RS03195 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 47 85
o Pseudomonas sp. S08-1 OH686_23800 23S rRNA (uridine(2552)-2'-O)-methyltransferase cofit 45 85
o Acinetobacter baumannii LAC-4 RR41_RS04180 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE sig. 43 86
o Dickeya dadantii 3937 DDA3937_RS03025 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 47 85
o Shewanella sp. ANA-3 Shewana3_1022 rrmJ 23S rRNA methyltransferase J (RefSeq) no data 45 86
o Acinetobacter radioresistens SK82 MPMX26_00771 Ribosomal RNA large subunit methyltransferase E strong 42 86
o Rahnella sp. WP5 EX31_RS08585 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 48 86
o Enterobacter asburiae PDN3 EX28DRAFT_3230 cell division protein FtsJ no data 48 86
o Escherichia coli BL21 ECD_03044 23S rRNA U2552 2'-O-ribose methyltransferase, SAM-dependent no data 47 86
o Escherichia fergusonii Becca EFB2_00644 Ribosomal RNA large subunit methyltransferase E no data 47 86
o Escherichia coli ECOR27 NOLOHH_09855 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 47 86
o Escherichia coli ECOR38 HEPCGN_16930 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 47 86
o Escherichia coli ECRC100 OKFHMN_18055 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 47 86
o Escherichia coli ECRC101 MCAODC_08575 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 47 86
o Escherichia coli ECRC102 NIAGMN_15815 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 47 86
o Escherichia coli ECRC62 BNILDI_01680 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 47 86
o Escherichia coli ECRC98 JDDGAC_21680 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 47 86
o Escherichia coli ECRC99 KEDOAH_10095 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 47 86
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00521 Ribosomal RNA large subunit methyltransferase E no data 47 86
o Escherichia coli Nissle 1917 ECOLIN_RS18310 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 47 86
o Escherichia coli BW25113 b3179 rlmE 23S rRNA U2552 ribose 2'-O-methyltransferase, SAM-dependent (NCBI) no data 47 86
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2920 Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) ## LSU rRNA Um2552 no data 47 86
o Marinobacter adhaerens HP15 HP15_3615 ribosomal RNA large subunit methyltransferase J sig. 45 85
o Shewanella oneidensis MR-1 SO1196 rrmJ ribosomal RNA large subunit methyltransferase J (NCBI ptt file) strong 45 86
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS06565 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 49 84
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_13875 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE insig. 47 86
o Erwinia tracheiphila SCR3 LU632_RS21110 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE cofit 47 86
o Pantoea sp. MT58 IAI47_17070 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 46 86
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS09165 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 46 86
o Dickeya dianthicola ME23 DZA65_RS03190 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 47 85
o Methylophilus sp. DMC18 GFF316 Ribosomal RNA large subunit methyltransferase E cofit 46 82
o Serratia liquefaciens MT49 IAI46_01890 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 47 85
o Klebsiella michiganensis M5al BWI76_RS25145 23S rRNA (uridine(2552)-2'-O)-methyltransferase no data 48 86
o Klebsiella pneumoniae MKP103 KDGMDA_05965 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 47 86
o Klebsiella pneumoniae MRSN742743 KFA93_RS13220 rlmE;go_function=rRNA 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 47 86
o Vibrio cholerae E7946 ATCC 55056 CSW01_03340 ribosomal RNA large subunit methyltransferase E insig. 44 87
o Shewanella loihica PV-4 Shew_2835 rrmJ 23S rRNA methyltransferase J (RefSeq) no data 44 86
o Erwinia amylovora T8 OLJFJH_07195 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 46 86
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS12240 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 47 86
o Rhodanobacter sp. FW510-T8 OKGIIK_08085 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 47 85
o Pectobacterium carotovorum WPP14 HER17_RS18320 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 47 85
o Pseudomonas stutzeri RCH2 Psest_1346 23S rRNA methylase no data 43 85
o Rhodanobacter denitrificans MT42 LRK55_RS16405 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE strong 47 84
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS16680 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 47 84
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3125.1 Heat shock protein FtsJ/RrmJ @ Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) no data 46 85
o Castellaniella sp019104865 MT123 ABCV34_RS15550 RlmE family RNA methyltransferase no data 44 85
o Variovorax sp. SCN45 GFF370 23S rRNA (uridine(2552)-2'-O)-methyltransferase (EC 2.1.1.166) cofit 41 90
o Acidovorax sp. GW101-3H11 Ac3H11_441 Heat shock protein FtsJ/RrmJ @ Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) sig. 41 89
o Paraburkholderia graminis OAS925 ABIE53_003000 23S rRNA (uridine2552-2'-O)-methyltransferase no data 43 82
o Ralstonia sp. UNC404CL21Col ABZR87_RS14120 RlmE family RNA methyltransferase no data 44 83
o Lysobacter sp. OAE881 ABIE51_RS06520 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE no data 45 85
o Variovorax sp. OAS795 ABID97_RS17050 RlmE family RNA methyltransferase insig. 43 83
o Ralstonia solanacearum GMI1000 RS_RS07650 ribosomal RNA large subunit methyltransferase E no data 43 83
o Cupriavidus basilensis FW507-4G11 RR42_RS13490 ribosomal RNA large subunit methyltransferase E no data 42 83
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04407 23S rRNA Um-2552 2'-O-methyltransferase no data 42 82
o Ralstonia solanacearum PSI07 RPSI07_RS15275 RlmE family RNA methyltransferase no data 43 83
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS02170 RlmE family RNA methyltransferase no data 43 83
o Ralstonia solanacearum UW163 UW163_RS15480 RlmE family RNA methyltransferase no data 43 83
o Paraburkholderia sabiae LMG 24235 QEN71_RS04800 RlmE family RNA methyltransferase no data 41 82
o Burkholderia phytofirmans PsJN BPHYT_RS14170 ribosomal RNA large subunit methyltransferase E no data 42 82
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4216 Heat shock protein FtsJ/RrmJ @ Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) cofit 39 88
o Herbaspirillum seropedicae SmR1 HSERO_RS06940 23S rRNA methyltransferase insig. 41 83
o Desulfovibrio vulgaris Hildenborough JW710 DVU2260 rrmJ ribosomal RNA large subunit methyltransferase J (TIGR) sig. 35 81
  Methanococcus maripaludis JJ MMJJ_RS01880 RlmE family RNA methyltransferase sig. 35 83
  Methanococcus maripaludis S2 MMP_RS03190 RlmE family RNA methyltransferase no data 34 83
  Desulfovibrio vulgaris Miyazaki F DvMF_3200 ribosomal RNA methyltransferase RrmJ/FtsJ (RefSeq) insig. 35 81