Homologs of PS417_17070 from Pseudomonas simiae WCS417

RNA polymerase subunit sigma-24
SEED: RNA polymerase sigma-54 factor RpoN
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_17070 RNA polymerase subunit sigma-24 insig. 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS19010 sigma-70 family RNA polymerase sigma factor insig. 96 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS19010 sigma-70 family RNA polymerase sigma factor sig. 96 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03722 ECF RNA polymerase sigma factor EcfG no data 95 100
o Pseudomonas orientalis W4I3 QF045_RS18740 sigma-70 family RNA polymerase sigma factor insig. 93 100
o Pseudomonas fluorescens FW300-N2E3 AO353_20305 RNA polymerase subunit sigma-24 no data 88 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3977 RNA polymerase sigma-54 factor RpoN insig. 86 100
o Pseudomonas sp. DMC3 GFF1465 ECF RNA polymerase sigma factor EcfG insig. 86 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2582 RNA polymerase sigma-54 factor RpoN insig. 86 100
o Pseudomonas sp. RS175 PFR28_01251 ECF RNA polymerase sigma factor EcfG insig. 83 100
o Pseudomonas fluorescens FW300-N2C3 AO356_01625 RNA polymerase subunit sigma-24 insig. 83 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2200 RNA polymerase sigma-54 factor RpoN sig. 82 100
o Pseudomonas sp. SVBP6 COO64_RS10855 sigma-70 family RNA polymerase sigma factor insig. 63 100
o Pseudomonas putida KT2440 PP_2888 putative ECF sigma factor PrtI no data 60 100
o Pseudomonas sp. BP01 JOY50_RS05860 sigma-70 family RNA polymerase sigma factor no data 58 100
o Variovorax sp. SCN45 GFF215 RNA polymerase sigma-54 factor RpoN insig. 46 96
o Variovorax sp. OAS795 ABID97_RS16445 sigma-70 family RNA polymerase sigma factor no data 46 96
o Azospirillum brasilense Sp245 AZOBR_RS23735 RNA polymerase no data 43 89
o Azospirillum sp. SherDot2 MPMX19_00923 hypothetical protein insig. 42 91
o Burkholderia phytofirmans PsJN BPHYT_RS08240 RNA polymerase subunit sigma-24 sig. 46 90
o Paraburkholderia sabiae LMG 24235 QEN71_RS23005 sigma-70 family RNA polymerase sigma factor insig. 43 93
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05124 RNA polymerase sigma-70 factor, ECF subfamily insig. 46 90
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF329 RNA polymerase sigma-54 factor RpoN insig. 40 98
o Rhizobium sp. OAE497 ABIE40_RS22730 RNA polymerase sigma factor insig. 38 97
o Paraburkholderia graminis OAS925 ABIE53_002425 RNA polymerase sigma-70 factor (ECF subfamily) insig. 44 90
o Agrobacterium fabrum C58 Atu1485 ECF family sigma factor insig. 38 100
  Azospirillum sp. SherDot2 MPMX19_01371 hypothetical protein insig. 44 93
  Azospirillum sp. SherDot2 MPMX19_00764 ECF RNA polymerase sigma factor EcfG insig. 43 88
o Ralstonia solanacearum GMI1000 RS_RS14950 RNA polymerase sigma factor no data 44 96
o Cupriavidus basilensis FW507-4G11 RR42_RS19070 DNA-directed RNA polymerase sigma-70 factor insig. 40 95
o Ralstonia solanacearum PSI07 RPSI07_RS10230 RNA polymerase sigma factor no data 43 96
o Alteromonas macleodii MIT1002 MIT1002_03872 RNA polymerase sigma factor SigM insig. 35 92
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06547 RNA polymerase sigma-70 factor, ECF subfamily insig. 39 97
o Sinorhizobium meliloti 1021 SMa0143 RNA polymerase ECF sigma factor insig. 44 90
  Azospirillum brasilense Sp245 AZOBR_RS06360 RNA polymerase subunit sigma-24 no data 43 89
  Burkholderia phytofirmans PsJN BPHYT_RS24740 RNA polymerase subunit sigma-24 sig. 39 97
  Paraburkholderia graminis OAS925 ABIE53_006215 RNA polymerase sigma-70 factor (ECF subfamily) insig. 39 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS00095 RNA polymerase sigma factor insig. 36 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS07010 RNA polymerase sigma factor no data 42 97
o Ralstonia solanacearum UW163 UW163_RS06605 RNA polymerase sigma factor no data 42 97
  Azospirillum brasilense Sp245 AZOBR_RS10625 RNA polymerase sigma-70 factor insig. 40 93
o Ralstonia sp. UNC404CL21Col ABZR87_RS02660 RNA polymerase sigma factor insig. 40 91
o Sphingobium sp. HT1-2 GFF2028 hypothetical protein cofit 40 100
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4350 RNA polymerase sigma-54 factor RpoN insig. 45 88
  Sinorhizobium meliloti 1021 SMc02713 RNA polymerase sigma-E factor (sigma-24) protein strong 39 88
  Sphingobium sp. HT1-2 GFF4975 RNA polymerase ECF-type sigma factor cofit 42 92
  Cupriavidus basilensis FW507-4G11 RR42_RS32410 RNA polymerase subunit sigma-24 no data 42 85
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3411 RNA polymerase sigma factor, sigma-70 family insig. 40 91
o Dechlorosoma suillum PS Dsui_1302 RNA polymerase sigma factor, sigma-70 family cofit 41 93
o Magnetospirillum magneticum AMB-1 AMB_RS13315 hypothetical protein insig. 40 96
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS02635 RNA polymerase sigma factor insig. 40 84
  Sinorhizobium meliloti 1021 SMc01419 RNA polymerase sigma factor protein sig. 35 88
  Xanthobacter sp. DMC5 GFF2321 ECF RNA polymerase sigma factor EcfG no data 40 92
  Azospirillum brasilense Sp245 AZOBR_RS11020 RNA polymerase subunit sigma-70 no data 44 87
  Sphingobium sp. HT1-2 GFF5151 RNA polymerase ECF-type sigma factor cofit 40 92
  Rhizobium sp. OAE497 ABIE40_RS11455 RNA polymerase sigma factor insig. 37 91
  Dinoroseobacter shibae DFL-12 Dshi_3835 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 40 87
o Herbaspirillum seropedicae SmR1 HSERO_RS13530 RNA polymerase subunit sigma-24 no data 42 94
  Sinorhizobium meliloti 1021 SM_b21484 RNA polymerase sigma-E factor (sigma-24) protein insig. 40 88
o Phaeobacter inhibens DSM 17395 PGA1_78p00070 'RNA polymerase sigma-70, ECF subfamily; ECF26 subgroup' no data 38 89
  Rhizobium sp. OAE497 ABIE40_RS20320 sigma-70 family RNA polymerase sigma factor insig. 42 82
  Rhodopseudomonas palustris CGA009 TX73_021900 sigma-70 family RNA polymerase sigma factor strong 37 85
  Sphingobium sp. HT1-2 GFF2317 RNA polymerase ECF-type sigma factor cofit 37 95
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3853 RNA polymerase sigma factor, sigma-70 family insig. 37 94
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14775 sigma-70 family RNA polymerase sigma factor strong 35 92
  Sinorhizobium meliloti 1021 SMc04051 RNA polymerase sigma-E factor (sigma-24) protein insig. 40 87
o Caulobacter crescentus NA1000 CCNA_03589 RNA polymerase EcfG family sigma factor sigT strong 34 96
o Caulobacter crescentus NA1000 Δfur CCNA_03589 RNA polymerase EcfG family sigma factor sigT cofit 34 96
  Phaeobacter inhibens DSM 17395 PGA1_c27070 RNA polymerase sigma factor 70 (ECF15 subgroup, ECF26 subgroup) insig. 38 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS36705 RNA polymerase sigma factor insig. 35 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05041 RNA polymerase sigma-70 factor, ECF subfamily insig. 39 90
  Sphingobium sp. HT1-2 GFF1466 RNA polymerase sigma-54 factor RpoN insig. 37 84
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05043 RNA polymerase sigma-70 factor, ECF subfamily no data 36 92
  Agrobacterium fabrum C58 Atu4160 RNA polymerase sigma factor strong 38 85
  Rhizobium sp. OAE497 ABIE40_RS14450 RNA polymerase sigma factor insig. 37 85
o Mycobacterium tuberculosis H37Rv Rv3223c Alternative RNA polymerase sigma-E factor (sigma-24) SigH (RPOE) insig. 34 92
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3492 RNA polymerase sigma factor, sigma-70 family strong 37 95
o Rahnella sp. WP5 EX31_RS05375 sigma-70 family RNA polymerase sigma factor insig. 37 95
o Bosea sp. OAE506 ABIE41_RS04095 sigma-70 family RNA polymerase sigma factor strong 38 93
  Caulobacter crescentus NA1000 CCNA_02977 RNA polymerase ECF-type sigma factor sigU strong 37 84
  Caulobacter crescentus NA1000 Δfur CCNA_02977 RNA polymerase ECF-type sigma factor sigU cofit 37 84
  Sphingobium sp. HT1-2 GFF4551 hypothetical protein cofit 39 82
  Paraburkholderia sabiae LMG 24235 QEN71_RS32245 RNA polymerase sigma factor insig. 36 89
o Kangiella aquimarina DSM 16071 B158DRAFT_0015 RNA polymerase sigma factor, sigma-70 family insig. 36 90
  Rhodospirillum rubrum S1H Rru_A3287 Sigma-24 (FecI) (NCBI) no data 36 86
  Azospirillum sp. SherDot2 MPMX19_01197 ECF RNA polymerase sigma factor EcfG insig. 32 91
  Rhizobium sp. OAE497 ABIE40_RS27415 sigma-70 family RNA polymerase sigma factor insig. 35 94
  Paraburkholderia graminis OAS925 ABIE53_003943 RNA polymerase sigma-70 factor (ECF subfamily) sig. 37 90
  Sphingobium sp. HT1-2 GFF5325 RNA polymerase ECF-type sigma factor cofit 38 86
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1191 RNA polymerase sigma factor, sigma-70 family insig. 39 80
  Paraburkholderia graminis OAS925 ABIE53_003919 RNA polymerase sigma-70 factor (ECF subfamily) insig. 35 90
  Azospirillum brasilense Sp245 AZOBR_RS14755 RNA polymerase sigma-70 factor insig. 32 90
  Agrobacterium fabrum C58 Atu2030 ECF family sigma factor insig. 39 85
o Serratia liquefaciens MT49 IAI46_22980 RNA polymerase sigma factor insig. 38 80
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19215 RNA polymerase subunit sigma sig. 32 85
o Enterobacter asburiae PDN3 EX28DRAFT_2729 RNA polymerase sigma factor, sigma-70 family insig. 35 92
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16550 RNA polymerase sigma factor strong 32 82
  Azospirillum sp. SherDot2 MPMX19_05043 hypothetical protein insig. 35 83
o Dickeya dadantii 3937 DDA3937_RS11055 sigma-70 family RNA polymerase sigma factor insig. 35 97
o Dickeya dianthicola 67-19 HGI48_RS11075 sigma-70 family RNA polymerase sigma factor insig. 35 97